Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31393
         (780 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    24   1.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    24   1.2  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    24   1.2  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    24   1.2  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   3.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   3.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.6  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   6.3  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   6.3  

>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +2

Query: 122 HQHH*TSIPLDFYSHSWN*IITTMSASQKESWAAAIDLLTNDECR 256
           H HH  +    F + +   ++ + S++   + AAA+D  T+  CR
Sbjct: 9   HHHH-QAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCR 52


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +2

Query: 122 HQHH*TSIPLDFYSHSWN*IITTMSASQKESWAAAIDLLTNDECR 256
           H HH  +    F + +   ++ + S++   + AAA+D  T+  CR
Sbjct: 68  HHHH-QAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCR 111


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +2

Query: 122 HQHH*TSIPLDFYSHSWN*IITTMSASQKESWAAAIDLLTNDECR 256
           H HH  +    F + +   ++ + S++   + AAA+D  T+  CR
Sbjct: 9   HHHH-QAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCR 52


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +2

Query: 122 HQHH*TSIPLDFYSHSWN*IITTMSASQKESWAAAIDLLTNDECR 256
           H HH  +    F + +   ++ + S++   + AAA+D  T+  CR
Sbjct: 68  HHHH-QAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCR 111


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 179 IITTMSASQKESWAAAIDLLTNDECRLLLEVEDFFNDDCDLL 304
           IIT M+ +Q  +W A        E ++  E ++  +DD D L
Sbjct: 122 IITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDAL 163


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = +2

Query: 560 SSPFVTSQPTEELLREFETVYGAVELTHLTPPQSPPGPADSVASELR 700
           +SP+   +P    L     VY   +      P S PGP  S  S ++
Sbjct: 265 ASPYPMQRPKSASLSPPPHVYNPPDHIQQATPYSAPGPTYSTWSTVQ 311


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 769 ICHASCGGAREAEGASA 719
           + H  CGG  EAE A A
Sbjct: 262 LVHHKCGGEEEAERAPA 278


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 432 VNANKRIFSPTG*RKKLTSLRSSKTFLKFLNAW 530
           + AN+  F  TG    L  L  +K + KF+  W
Sbjct: 84  LEANRLFFFLTGVMASLLFLNLAKRWPKFVKDW 116


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 432 VNANKRIFSPTG*RKKLTSLRSSKTFLKFLNAW 530
           + AN+  F  TG    L  L  +K + KF+  W
Sbjct: 84  LEANRLFFFLTGVMASLLFLNLAKRWPKFVKDW 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,466
Number of Sequences: 336
Number of extensions: 3405
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)