Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31393
(780 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021728-3|CAA16820.1| 1042|Drosophila melanogaster EG:95B7.8,FB... 32 0.77
AF141673-1|AAD32687.1| 1042|Drosophila melanogaster fs(1)YB prot... 32 0.77
AE014298-454|AAF45815.1| 1042|Drosophila melanogaster CG2706-PA ... 32 0.77
BT011042-1|AAR31113.1| 856|Drosophila melanogaster SD02665p pro... 29 5.4
AY061331-1|AAL28879.1| 403|Drosophila melanogaster LD25702p pro... 29 5.4
AF353512-1|AAK58866.1| 856|Drosophila melanogaster regular prot... 29 5.4
AE014296-1025|AAF50735.1| 525|Drosophila melanogaster CG10489-P... 29 5.4
AE013599-673|AAF59069.2| 856|Drosophila melanogaster CG8643-PA ... 29 5.4
AB102715-1|BAD10843.1| 403|Drosophila melanogaster DNA polymera... 29 5.4
AY128416-1|AAM75009.1| 907|Drosophila melanogaster GH06923p pro... 29 9.5
AY069653-1|AAL39798.1| 713|Drosophila melanogaster LD42374p pro... 29 9.5
AE014134-2029|AAF53068.2| 907|Drosophila melanogaster CG6192-PA... 29 9.5
AE013599-1154|AAF58768.1| 713|Drosophila melanogaster CG11883-P... 29 9.5
AE013599-1153|AAF58767.1| 732|Drosophila melanogaster CG11883-P... 29 9.5
>AL021728-3|CAA16820.1| 1042|Drosophila melanogaster
EG:95B7.8,FBgn0000928;fs(1)Yb protein.
Length = 1042
Score = 32.3 bits (70), Expect = 0.77
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Frame = +2
Query: 440 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 607
K++ I + + V L + FE S VD PAA + SPFVT PT+ L E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279
Query: 608 FETVYGAVELTHLTPPQS-PPGPADSV 685
F+ + + ++ ++ + PP P+ S+
Sbjct: 280 FQELVKSFKVQNVFKNMNLPPPPSVSI 306
>AF141673-1|AAD32687.1| 1042|Drosophila melanogaster fs(1)YB
protein.
Length = 1042
Score = 32.3 bits (70), Expect = 0.77
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Frame = +2
Query: 440 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 607
K++ I + + V L + FE S VD PAA + SPFVT PT+ L E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279
Query: 608 FETVYGAVELTHLTPPQS-PPGPADSV 685
F+ + + ++ ++ + PP P+ S+
Sbjct: 280 FQELVKSFKVQNVFKNMNLPPPPSVSI 306
>AE014298-454|AAF45815.1| 1042|Drosophila melanogaster CG2706-PA
protein.
Length = 1042
Score = 32.3 bits (70), Expect = 0.77
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Frame = +2
Query: 440 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 607
K++ I + + V L + FE S VD PAA + SPFVT PT+ L E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279
Query: 608 FETVYGAVELTHLTPPQS-PPGPADSV 685
F+ + + ++ ++ + PP P+ S+
Sbjct: 280 FQELVKSFKVQNVFKNMNLPPPPSVSI 306
>BT011042-1|AAR31113.1| 856|Drosophila melanogaster SD02665p
protein.
Length = 856
Score = 29.5 bits (63), Expect = 5.4
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +2
Query: 476 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 655
++DL + EN P P PP+A ++ S P L F ++ V +T TP
Sbjct: 134 EIDLVYVVEN----PLPPSP-PPSADISVDELPGSSPQSFDLDPFAVLHEVVTMTPPTPI 188
Query: 656 QSPPGP 673
PPGP
Sbjct: 189 APPPGP 194
>AY061331-1|AAL28879.1| 403|Drosophila melanogaster LD25702p
protein.
Length = 403
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 476 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 631
++DLP + E + ++ D PP A++ PF S LR G +
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 222
>AF353512-1|AAK58866.1| 856|Drosophila melanogaster regular
protein.
Length = 856
Score = 29.5 bits (63), Expect = 5.4
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +2
Query: 476 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 655
++DL + EN P P PP+A ++ S P L F ++ V +T TP
Sbjct: 134 EIDLVYVVEN----PLPPSP-PPSADISVDELPGSSPQSFDLDPFAVLHEVVTMTPPTPI 188
Query: 656 QSPPGP 673
PPGP
Sbjct: 189 APPPGP 194
>AE014296-1025|AAF50735.1| 525|Drosophila melanogaster CG10489-PA
protein.
Length = 525
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 476 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 631
++DLP + E + ++ D PP A++ PF S LR G +
Sbjct: 293 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 344
>AE013599-673|AAF59069.2| 856|Drosophila melanogaster CG8643-PA
protein.
Length = 856
Score = 29.5 bits (63), Expect = 5.4
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +2
Query: 476 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 655
++DL + EN P P PP+A ++ S P L F ++ V +T TP
Sbjct: 134 EIDLVYVVEN----PLPPSP-PPSADISVDELPGSSPQSFDLDPFAVLHEVVTMTPPTPI 188
Query: 656 QSPPGP 673
PPGP
Sbjct: 189 APPPGP 194
>AB102715-1|BAD10843.1| 403|Drosophila melanogaster DNA polymerase
epsilon secondsubunit protein.
Length = 403
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 476 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 631
++DLP + E + ++ D PP A++ PF S LR G +
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 222
>AY128416-1|AAM75009.1| 907|Drosophila melanogaster GH06923p
protein.
Length = 907
Score = 28.7 bits (61), Expect = 9.5
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 539 PPAAVLASSPFVTSQPTEELLREFETVYGAVELTH--LTPPQSPPGPADSV 685
PP A + +T Q ++ + FE VY + +PPQ PP PA +V
Sbjct: 742 PPQAAVVPPTRITLQQAQQRVSAFE-VYRKPQTPRGSQSPPQQPPPPAPAV 791
>AY069653-1|AAL39798.1| 713|Drosophila melanogaster LD42374p
protein.
Length = 713
Score = 28.7 bits (61), Expect = 9.5
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 576 VTKGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 454
V++ R GCGS SG+ + + GRST S+QLEK
Sbjct: 83 VSQPQSPRHRGSGCGSV-SGSRIITHGLTGRSTSISSQLEK 122
>AE014134-2029|AAF53068.2| 907|Drosophila melanogaster CG6192-PA
protein.
Length = 907
Score = 28.7 bits (61), Expect = 9.5
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 539 PPAAVLASSPFVTSQPTEELLREFETVYGAVELTH--LTPPQSPPGPADSV 685
PP A + +T Q ++ + FE VY + +PPQ PP PA +V
Sbjct: 742 PPQAAVVPPTRITLQQAQQRVSAFE-VYRKPQTPRGSQSPPQQPPPPAPAV 791
>AE013599-1154|AAF58768.1| 713|Drosophila melanogaster CG11883-PB,
isoform B protein.
Length = 713
Score = 28.7 bits (61), Expect = 9.5
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 576 VTKGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 454
V++ R GCGS SG+ + + GRST S+QLEK
Sbjct: 83 VSQPQSPRHRGSGCGSV-SGSRIITHGLTGRSTSISSQLEK 122
>AE013599-1153|AAF58767.1| 732|Drosophila melanogaster CG11883-PA,
isoform A protein.
Length = 732
Score = 28.7 bits (61), Expect = 9.5
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 576 VTKGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 454
V++ R GCGS SG+ + + GRST S+QLEK
Sbjct: 83 VSQPQSPRHRGSGCGSV-SGSRIITHGLTGRSTSISSQLEK 122
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,051,425
Number of Sequences: 53049
Number of extensions: 670474
Number of successful extensions: 2016
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2014
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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