Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31390
         (784 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    24   1.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    24   1.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.8  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.8  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.8  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    22   6.4  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    22   6.4  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   6.4  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   8.4  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 68  RMFYSEVRNKHGNMPFNLRSFDKETSARLGVVE 166
           +M     RN    + F LR F+K  + RLG V+
Sbjct: 170 KMLLVRYRNLTKQLRFKLRFFEKLGNRRLGFVQ 202


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 68  RMFYSEVRNKHGNMPFNLRSFDKETSARLGVVE 166
           +M     RN    + F LR F+K  + RLG V+
Sbjct: 170 KMLLVRYRNLTKQLRFKLRFFEKLGNRRLGFVQ 202


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 578 QS*IFIHITISQDVVVSVKNCTIF 507
           QS IFI++   +  ++ +KNC I+
Sbjct: 127 QSGIFINLPFLEHNLIRLKNCVIY 150


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 524 KNCTIFVIFVHLYCGKMLISF 462
           KNCTI +IF HL    +L+ F
Sbjct: 40  KNCTIVIIF-HLILFAVLLYF 59


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 115 EGHVAMFVTNLTIEHSGS 62
           EG    F TN+ ++H+GS
Sbjct: 98  EGFDGTFQTNVVVKHNGS 115


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 115 EGHVAMFVTNLTIEHSGS 62
           EG    F TN+ ++H+GS
Sbjct: 98  EGFDGTFQTNVVVKHNGS 115


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 115 EGHVAMFVTNLTIEHSGS 62
           EG    F TN+ ++H GS
Sbjct: 98  EGFDGTFQTNVVVKHGGS 115


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 115 EGHVAMFVTNLTIEHSGS 62
           EG    F TN+ ++H GS
Sbjct: 98  EGFDGTFQTNVVVKHGGS 115


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 115 EGHVAMFVTNLTIEHSGS 62
           EG    F TN+ ++H GS
Sbjct: 98  EGFDGTFQTNVVVKHGGS 115


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +3

Query: 222 NWWHSLSSR 248
           NWWH L ++
Sbjct: 94  NWWHELETK 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,346
Number of Sequences: 336
Number of extensions: 4418
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)