Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31390
(784 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g51800.1 68416.m05680 metallopeptidase M24 family protein sim... 110 1e-24
At3g51800.2 68416.m05681 metallopeptidase M24 family protein sim... 100 2e-21
At3g59990.2 68416.m06698 methionyl aminopeptidase, putative / me... 32 0.37
At3g59990.1 68416.m06697 methionyl aminopeptidase, putative / me... 32 0.37
At2g44180.1 68415.m05496 methionyl aminopeptidase, putative / me... 32 0.49
At4g21760.1 68417.m03149 glycosyl hydrolase family 1 protein con... 28 6.1
At3g23430.1 68416.m02953 phosphate transporter, putative (PHO1) ... 28 8.0
>At3g51800.1 68416.m05680 metallopeptidase M24 family protein
similar to SP|P50580 Proliferation-associated protein
2G4 {Mus musculus}; contains Pfam profile PF00557:
metallopeptidase family M24
Length = 392
Score = 110 bits (264), Expect = 1e-24
Identities = 56/109 (51%), Positives = 75/109 (68%), Gaps = 1/109 (0%)
Frame = +2
Query: 17 TIYKKTDEV-YQLKLKASRMFYSEVRNKHGNMPFNLRSFDKETSARLGVVECINHKLIEP 193
TIYKK + V YQLK+KASR SE++ MPF RS + E ARLG+VEC+NH ++P
Sbjct: 243 TIYKKDESVNYQLKMKASRFIISEIKQNFPRMPFTARSLE-EKRARLGLVECVNHGHLQP 301
Query: 194 FQVLYERPGELVAQFKFTALLLPSGTHRITGLPFDKSQCKSERSIKDPE 340
+ VLYE+PG+ VAQ KFT LL+P+G+ RIT Q +++I+DPE
Sbjct: 302 YPVLYEKPGDFVAQIKFTVLLMPNGSDRITS---HTLQELPKKTIEDPE 347
>At3g51800.2 68416.m05681 metallopeptidase M24 family protein
similar to SP|P50580 Proliferation-associated protein
2G4 {Mus musculus}; contains Pfam profile PF00557:
metallopeptidase family M24
Length = 401
Score = 99.5 bits (237), Expect = 2e-21
Identities = 56/118 (47%), Positives = 75/118 (63%), Gaps = 10/118 (8%)
Frame = +2
Query: 17 TIYKKTDEV-YQLKLKASRMFYSEVRNKHGNMPFNLRSFDKETSARLGVVECINHKLIEP 193
TIYKK + V YQLK+KASR SE++ MPF RS + E ARLG+VEC+NH ++P
Sbjct: 243 TIYKKDESVNYQLKMKASRFIISEIKQNFPRMPFTARSLE-EKRARLGLVECVNHGHLQP 301
Query: 194 FQVLYER---------PGELVAQFKFTALLLPSGTHRITGLPFDKSQCKSERSIKDPE 340
+ VLYE+ PG+ VAQ KFT LL+P+G+ RIT Q +++I+DPE
Sbjct: 302 YPVLYEKPGSCRFGFLPGDFVAQIKFTVLLMPNGSDRITS---HTLQELPKKTIEDPE 356
>At3g59990.2 68416.m06698 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to Methionine aminopeptidase 2 (EC
3.4.11.18) from {Rattus norvegicus} SP|P38062, {Homo
sapiens} SP|P50579; contains Pfam profile PF00557:
metallopeptidase family M24; supporting cDNA
gi|11344921|gb|AF300880.1|AF300880
Length = 439
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +2
Query: 14 CTIYKKTDEV--YQLKLKASRMFYSEVRNKHGNMPFNLRSFDK--ETSARLGVVECINHK 181
C+ Y K + L+L ++ + + + F R D+ ET + + +
Sbjct: 341 CSHYMKNFDAGHVPLRLPRAKQLLATINKNFSTLAFCRRYLDRIGETKYLMALKNLCDSG 400
Query: 182 LIEPFQVLYERPGELVAQFKFTALLLPS 265
+++P+ L + G V+QF+ T LL P+
Sbjct: 401 IVQPYPPLCDVKGSYVSQFEHTILLRPT 428
>At3g59990.1 68416.m06697 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to Methionine aminopeptidase 2 (EC
3.4.11.18) from {Rattus norvegicus} SP|P38062, {Homo
sapiens} SP|P50579; contains Pfam profile PF00557:
metallopeptidase family M24; supporting cDNA
gi|11344921|gb|AF300880.1|AF300880
Length = 439
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +2
Query: 14 CTIYKKTDEV--YQLKLKASRMFYSEVRNKHGNMPFNLRSFDK--ETSARLGVVECINHK 181
C+ Y K + L+L ++ + + + F R D+ ET + + +
Sbjct: 341 CSHYMKNFDAGHVPLRLPRAKQLLATINKNFSTLAFCRRYLDRIGETKYLMALKNLCDSG 400
Query: 182 LIEPFQVLYERPGELVAQFKFTALLLPS 265
+++P+ L + G V+QF+ T LL P+
Sbjct: 401 IVQPYPPLCDVKGSYVSQFEHTILLRPT 428
>At2g44180.1 68415.m05496 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to SP|P50579 Methionine aminopeptidase
2 (EC 3.4.11.18) (MetAP 2) {Homo sapiens}; contains Pfam
profile PF00557: metallopeptidase family M24
Length = 441
Score = 31.9 bits (69), Expect = 0.49
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +2
Query: 14 CTIYKKTDEV--YQLKLKASRMFYSEVRNKHGNMPFNLRSFDK--ETSARLGVVECINHK 181
C+ Y K +V L+L ++ + + + F R D+ ET + + +
Sbjct: 343 CSHYMKNYDVGHVPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDSG 402
Query: 182 LIEPFQVLYERPGELVAQFKFTALLLPS 265
+IEP + + G ++QF+ T LL P+
Sbjct: 403 IIEPCPPVCDVKGSYISQFEHTILLRPT 430
>At4g21760.1 68417.m03149 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to dalcochinin 8'-O-beta-glucoside
beta-glucosidase precursor (GI:6118076) [Dalbergia
cochinchinensis]
Length = 535
Score = 28.3 bits (60), Expect = 6.1
Identities = 9/37 (24%), Positives = 22/37 (59%)
Frame = -1
Query: 283 SNTMCATRKQKSRELKLCHQFSWTLIENLEWLNEFVV 173
SN + A ++ + + F+W+L++N EW++ + +
Sbjct: 448 SNYLDALKRAMRKGADVRGYFAWSLLDNFEWISGYTI 484
>At3g23430.1 68416.m02953 phosphate transporter, putative (PHO1)
identical to PHO1 protein [Arabidopsis thaliana]
GI:20069032; supporting cDNA gi|20069031|gb|AF474076.1|;
contains Pfam profiles PF03124: EXS family and PF03105:
SPX domain
Length = 782
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 519 LHNFCYFCPFILWKNVNIIYSW 454
LH F Y C +WKN I Y++
Sbjct: 437 LHMFMYGCNLYMWKNTRINYTF 458
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,750,244
Number of Sequences: 28952
Number of extensions: 340909
Number of successful extensions: 793
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1755792000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -