Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31387
         (781 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0428 - 3127098-3129254                                           31   1.4  
07_01_0276 + 2028983-2029070,2030084-2030151,2030317-2031246,203...    30   2.4  
03_05_0845 - 28155065-28155374,28156201-28156342,28156375-281565...    30   2.4  
05_03_0353 - 12856385-12857705,12858007-12858959                       28   9.6  
03_05_0736 - 27254502-27255497                                         28   9.6  
02_02_0453 + 10420585-10421661,10422015-10422146,10422232-104224...    28   9.6  

>02_01_0428 - 3127098-3129254
          Length = 718

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +2

Query: 416 ASKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGY 535
           A  ++ PTY++SK   P+   + Y+Y I+R + +VA  G+
Sbjct: 523 ARVLILPTYMSSKKDLPALKDWKYEYRILRAEVNVARNGF 562


>07_01_0276 +
           2028983-2029070,2030084-2030151,2030317-2031246,
           2031334-2031415,2031544-2031609,2032606-2033304,
           2033422-2035424,2035599-2036173,2037060-2037223,
           2037306-2037365,2037475-2037839
          Length = 1699

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +2

Query: 599 GTENEGIKVKGFYEYV--GPDGVTYRVDYTADENGFRC*RSSHP 724
           G + +  + KGF  Y+  G DG ++  D   D+N  R  +SS+P
Sbjct: 189 GKDGDAAREKGFSHYIAHGKDGNSHEKDAERDDNISRSWKSSYP 232


>03_05_0845 -
           28155065-28155374,28156201-28156342,28156375-28156505,
           28156591-28156784,28156859-28156969,28157234-28157399,
           28157501-28157668,28157766-28158787
          Length = 747

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 605 ENEGIKVKGFYEYVGPDGVTYRVDYTAD 688
           E  G +++G   +VGPDG TYR  + AD
Sbjct: 90  EFRGGRIEGQGVFVGPDGATYRGAWAAD 117


>05_03_0353 - 12856385-12857705,12858007-12858959
          Length = 757

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -1

Query: 406 GCDWHGNGRLHDGQGNNAGSLVSITKVFAEVL 311
           GC+W   G    GQ   A S VS T    E+L
Sbjct: 172 GCEWSDPGFFLRGQEEEASSSVSTTTAMEEIL 203


>03_05_0736 - 27254502-27255497
          Length = 331

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = +3

Query: 531 ATTTCTRPR--TRFSLKKPARSRTLAPKTKASRS 626
           ATTT + P+  T+F+L + ARS T  P +K+  S
Sbjct: 14  ATTTLSSPQLCTQFALDRVARSTTTIPLSKSKSS 47


>02_02_0453 +
           10420585-10421661,10422015-10422146,10422232-10422456,
           10422555-10422680,10422777-10422839,10423214-10423296,
           10424078-10424309,10424421-10424489,10424532-10424731,
           10424819-10424894,10425015-10425081,10425194-10425471,
           10425600-10425787,10426235-10426391,10426496-10426741
          Length = 1072

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 442 VCGCDHLAGNVCGCDWHGNGRLHDGQGNNAG 350
           VC C H  G++C CD    G+  D    + G
Sbjct: 8   VCSCPHYKGSLCFCDCGCFGQTPDSPRESRG 38


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,025,374
Number of Sequences: 37544
Number of extensions: 339372
Number of successful extensions: 1060
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)