Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31387
         (781 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g35794.1 68418.m04297 hypothetical protein contains Pfam prof...    31   0.86 
At3g29710.1 68416.m03745 hypothetical protein contains Pfam prof...    30   2.0  
At2g04330.1 68415.m00429 hypothetical protein contains Pfam prof...    30   2.0  
At1g11680.1 68414.m01341 obtusifoliol 14-demethylase (CYP51) ide...    28   6.0  
At5g34970.1 68418.m04127 hypothetical protein similar to At5g368...    28   8.0  

>At5g35794.1 68418.m04297 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287
          Length = 662

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = +3

Query: 579 PARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLTKTGFVADGAHIPSKSSRD 743
           PA++   A  T A+ +  +  T APT +PT  + +L  + F     HIP++  ++
Sbjct: 42  PAQTTATAMATNAAPTTAAPTTTAPTTAPTTESPMLDDSTFYDALKHIPTEEIQE 96


>At3g29710.1 68416.m03745 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287
          Length = 669

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = +3

Query: 573 KKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLTKTGFVADGAHIPSKSSRD 743
           + P ++   A  T A+ +  +  T APT +PT  + +L  + F     HIP++  ++
Sbjct: 71  QSPTQTTATAMATNAAPTTAAPTTTAPTTAPTTESPMLDDSTFYDALKHIPAEEIQE 127


>At2g04330.1 68415.m00429 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287
          Length = 564

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = +3

Query: 528 KATTTCTRPRTRFSLKKPARSRTLAPK--TKASRSRDSTNTLAPTVSPTE*TTLLTKTGF 701
           K      + + +   K  A ++T+A    T A+ +  +  T APT +PT  + +L  + F
Sbjct: 53  KVQAPAKKAKVQAPAKTTATAQTIATAMATNAAPTTAALTTTAPTTAPTTESPMLDDSTF 112

Query: 702 VADGAHIPSKSSRD 743
                HIP++ +++
Sbjct: 113 YDALKHIPAEETQE 126


>At1g11680.1 68414.m01341 obtusifoliol 14-demethylase (CYP51)
           identical to obtusifoliol 14-demethylase (GI:14624983)
           [Arabidopsis thaliana]
          Length = 488

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +2

Query: 50  ALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYN 220
           ++ A  GK        + +T   F  +      DP  YDP R + GR     +GA++
Sbjct: 366 SVTARDGKTYDIPKGHIVATSPAFANRLPHIFKDPDTYDPERFSPGREEDKAAGAFS 422


>At5g34970.1 68418.m04127 hypothetical protein similar to At5g36850,
           At1g27780, At2g05560, At3g42730, At1g52020, At2g14770,
           At3g43390, At3g24390, At1g34740, At1g25886, At4g03300,
           At4g05280
          Length = 478

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +3

Query: 552 PRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTL 683
           PR +   +K  R   ++P+ K S ++ +    +P+V+PTE  T+
Sbjct: 11  PRKQHGQRKEKRVLRVSPRRKRSATKATEELGSPSVAPTEDLTV 54


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,014,408
Number of Sequences: 28952
Number of extensions: 256625
Number of successful extensions: 850
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1746037600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)