Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31386
(776 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g08065.1 68414.m00882 carbonic anhydrase family protein simil... 60 2e-09
At3g52720.1 68416.m05808 carbonic anhydrase family protein low s... 54 8e-08
At2g28210.1 68415.m03425 carbonic anhydrase family protein simil... 51 1e-06
At5g04180.1 68418.m00406 carbonic anhydrase family protein simil... 50 2e-06
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 50 2e-06
At1g08080.1 68414.m00884 carbonic anhydrase family protein simil... 50 2e-06
At4g21000.1 68417.m03039 carbonic anhydrase family protein simil... 43 3e-04
At3g52720.2 68416.m05809 carbonic anhydrase family protein low s... 41 0.001
At5g57390.1 68418.m07170 ovule development protein, putative sim... 31 0.85
At4g04970.1 68417.m00722 callose synthase, putative / 1,3-beta-g... 31 0.85
At2g30020.1 68415.m03652 protein phosphatase 2C, putative / PP2C... 29 4.5
At1g25500.2 68414.m03166 choline transporter-related contains we... 29 4.5
At1g25500.1 68414.m03167 choline transporter-related contains we... 29 4.5
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 28 6.0
At3g56980.1 68416.m06342 basic helix-loop-helix (bHLH) family pr... 28 6.0
At2g28450.1 68415.m03456 zinc finger (CCCH-type) family protein ... 28 7.9
>At1g08065.1 68414.m00882 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 263
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Frame = +2
Query: 119 QHTLNDMRVPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLX--PIVKN 292
+HTLN R LE H++H++K RN V+AFFY++ + D LL +K
Sbjct: 119 EHTLNGKRFVLEEHMVHQSKDGRNA-----------VVAFFYKLGKPDYFLLTLERYLKR 167
Query: 293 LTAIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWVIFSDYLPISV 472
+T +++ H + G +++ +Y + GSLTTPPC+E V W I + +++
Sbjct: 168 ITDTHESQEFVEMVHPRTF-----GFESKHYYRFIGSLTTPPCSENVIWTISKEMRTVTL 222
Query: 473 FQM 481
Q+
Sbjct: 223 KQL 225
>At3g52720.1 68416.m05808 carbonic anhydrase family protein low
similarity to storage protein (dioscorin) [Dioscorea
cayenensis] GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 284
Score = 54.4 bits (125), Expect = 8e-08
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = +2
Query: 374 TERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNLNLPLVDNFRQLQPL 553
T ++Y Y GSLTTPPC+E V+W I +S Q++ R S L+ +N R QPL
Sbjct: 201 TRKYYRYIGSLTTPPCSENVSWTILGKVRSMSKEQVELLR---SPLDTSFKNNSRPCQPL 257
Query: 554 FGRRV 568
GRRV
Sbjct: 258 NGRRV 262
>At2g28210.1 68415.m03425 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 217
Score = 50.8 bits (116), Expect = 1e-06
Identities = 33/109 (30%), Positives = 50/109 (45%)
Frame = +2
Query: 119 QHTLNDMRVPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLXPIVKNLT 298
+HT+N R LE+H++H N L V+ Y++ D+ L + L+
Sbjct: 108 EHTMNGRRFALELHMVHENIN-----------GSLAVVTVLYKIGRPDS-FLGLLENKLS 155
Query: 299 AIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWVI 445
AI + N + I G + +FY Y GSLTTPPC + V W +
Sbjct: 156 AITDQNEAEKYVDVIDPRDIKIG--SRKFYRYIGSLTTPPCTQNVIWTV 202
>At5g04180.1 68418.m00406 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 277
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/70 (41%), Positives = 36/70 (51%)
Frame = +2
Query: 365 GLDTERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNLNLPLVDNFRQL 544
G D +FY Y+GSLTTPPC E V W I + +S Q+D L N R
Sbjct: 191 GWDLTKFYEYRGSLTTPPCTEDVMWTIINKVGTVSREQID---VLTDARRGGYEKNARPA 247
Query: 545 QPLFGRRVFV 574
QPL GR V++
Sbjct: 248 QPLNGRLVYL 257
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 50.0 bits (114), Expect = 2e-06
Identities = 38/151 (25%), Positives = 65/151 (43%)
Frame = +2
Query: 119 QHTLNDMRVPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLXPIVKNLT 298
+HT+N R LE+H++H + + R V+ Y++ E + + L ++ +
Sbjct: 131 EHTVNGTRYDLELHMVHTSARGRTA-----------VIGVLYKLGEPN-EFLTKLLNGIK 178
Query: 299 AIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQ 478
A+ N L + + T +FY Y GSLT PPC E V W + ++
Sbjct: 179 AVGNKEINLGMIDPREIR-----FQTRKFYRYIGSLTVPPCTEGVIWTVVK---RVNTIS 230
Query: 479 MDNFRGLLSNLNLPLVDNFRQLQPLFGRRVF 571
M+ L ++ N R +Q GR V+
Sbjct: 231 MEQITALRQAVDDGFETNSRPVQDSKGRSVW 261
>At1g08080.1 68414.m00884 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 275
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/109 (27%), Positives = 49/109 (44%)
Frame = +2
Query: 119 QHTLNDMRVPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLXPIVKNLT 298
+HT+N R LE+H++H + R + V+ Y++ D + + K L
Sbjct: 136 EHTINGRRFALELHMVHEGRNRR-----------MAVVTVLYKIGRADT-FIRSLEKELE 183
Query: 299 AIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWVI 445
I + + I G + ++Y Y GSLTTPPC + VTW +
Sbjct: 184 GIAEMEEAEKNVGMIDPTKIKIG--SRKYYRYTGSLTTPPCTQNVTWSV 230
>At4g21000.1 68417.m03039 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 260
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/109 (26%), Positives = 47/109 (43%)
Frame = +2
Query: 119 QHTLNDMRVPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLXPIVKNLT 298
+HT+N LE+H++H + + T V+ Y++ E D + L I+ +
Sbjct: 132 EHTINGTSYDLELHMVHTSASGKTT-----------VVGVLYKLGEPD-EFLTKILNGIK 179
Query: 299 AIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWVI 445
+ L + + +T FY Y GSLT PPC E V W +
Sbjct: 180 GVGKKEIDLGIVDPRDIR-----FETNNFYRYIGSLTIPPCTEGVIWTV 223
>At3g52720.2 68416.m05809 carbonic anhydrase family protein low
similarity to storage protein (dioscorin) [Dioscorea
cayenensis] GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 230
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 374 TERFYTYKGSLTTPPCAEAVTWVI 445
T ++Y Y GSLTTPPC+E V+W I
Sbjct: 201 TRKYYRYIGSLTTPPCSENVSWTI 224
>At5g57390.1 68418.m07170 ovule development protein, putative
similar to ovule development protein AINTEGUMENTA
(GI:1209099)[Arabidopsis thaliana]
Length = 555
Score = 31.1 bits (67), Expect = 0.85
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +3
Query: 531 TSGSYNRCLVAVSSSESHQRTLSSRRPNSTTPNGTGLDTRSPKMTSSTS 677
+S SY+ L SSS SHQ LS N+ N + +P +TSSTS
Sbjct: 10 SSSSYDSSLSPSSSSSSHQNWLSFSLSNN---NNNFNSSSNPNLTSSTS 55
>At4g04970.1 68417.m00722 callose synthase, putative /
1,3-beta-glucan synthase, putative similar to callose
synthase 1 catalytic subunit GI:13649388 from
[Arabidopsis thaliana]
Length = 1768
Score = 31.1 bits (67), Expect = 0.85
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 398 GSLTTPPCAEAVTWVIFSDYLPISV-FQMDNFRGLLSNLNLPLVDNFRQLQP 550
G L PP A+ + D+L + FQ+DN R NL L L ++ +LQP
Sbjct: 51 GDLPKPPFADFTPRMDLMDWLGLLFGFQIDNVRNQRENLVLHLANSQMRLQP 102
>At2g30020.1 68415.m03652 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase 2C
(GI:4587992){Arabidopsis thaliana}
Length = 396
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 546 NRCLVAVSSSESHQRTLSSRRPNSTTPNGTGLDTRSPK 659
N+ + S ES TLS R+P +++P+ SPK
Sbjct: 22 NKSSILSSPQESLSLTLSHRKPQTSSPSSPSTTVSSPK 59
>At1g25500.2 68414.m03166 choline transporter-related contains weak
similarity to CD92 protein [Homo sapiens]
gi|16945323|emb|CAC82175
Length = 488
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 759 HWYFKRVTPGTVLFISWLWDIYIYIYSSKSM 667
+W V G +FISW+W + + Y+++ M
Sbjct: 98 YWPLYAVAGGIGVFISWVWSLLLGSYANEMM 128
>At1g25500.1 68414.m03167 choline transporter-related contains weak
similarity to CD92 protein [Homo sapiens]
gi|16945323|emb|CAC82175
Length = 432
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 759 HWYFKRVTPGTVLFISWLWDIYIYIYSSKSM 667
+W V G +FISW+W + + Y+++ M
Sbjct: 98 YWPLYAVAGGIGVFISWVWSLLLGSYANEMM 128
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 119 QHTLNDMRVPLEMHIIHRNKKYR 187
+HT+N R LE H++H +K R
Sbjct: 238 EHTINGKRFALEEHLVHESKDKR 260
>At3g56980.1 68416.m06342 basic helix-loop-helix (bHLH) family
protein
Length = 258
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 335 HTFSLSSILSGLDTERF 385
H FS+S++LSGL+ +RF
Sbjct: 190 HNFSISNVLSGLEEDRF 206
>At2g28450.1 68415.m03456 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 809
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -2
Query: 343 ESMRQLQSGVEVLDGR 296
E+ QLQSGVE+LDG+
Sbjct: 214 ENAEQLQSGVEILDGK 229
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,611,730
Number of Sequences: 28952
Number of extensions: 420693
Number of successful extensions: 1084
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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