Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31384
(743 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 25 0.48
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 25 0.64
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 25 0.84
AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory recept... 23 3.4
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.9
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.9
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.9
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.9
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.9
AJ969955-1|CAI94742.1| 160|Tribolium castaneum torso-like prote... 21 7.9
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 21 7.9
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 21 7.9
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 25.4 bits (53), Expect = 0.48
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 658 YNILIRTNPFFYTNNIISTVLYNFL 732
YNIL + F+ N+ ++ +LYN +
Sbjct: 332 YNILYFSRIMFHINSAVNPILYNII 356
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 25.0 bits (52), Expect = 0.64
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 625 PARAPSHVDIP--YNILIRTNPFFYTNNIISTVLYNFL 732
P H++I YNIL Y N+ I+ +LYN +
Sbjct: 317 PEEQVYHLEIEKYYNILYFCRIMVYLNSAINPILYNLM 354
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 24.6 bits (51), Expect = 0.84
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +3
Query: 471 EDITTRHIFSYKILSCDE--CAMAGTLKDRSPGL 566
E+ TRH+ +I+ CD+ +AG + + GL
Sbjct: 250 EEYVTRHLIDGRIIGCDQRISFIAGYMTEEVSGL 283
>AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory receptor
candidate 42 protein.
Length = 347
Score = 22.6 bits (46), Expect = 3.4
Identities = 13/65 (20%), Positives = 31/65 (47%)
Frame = -3
Query: 429 AVIVFRVHAVLCDFSDFTVVKLLT*CKKRVCELSAKHETVFVLVIQLQTFQEIFIRSLVF 250
+++ + ++ FS +TV+ + +++ C+L +K LV TF +L +
Sbjct: 63 SIVAMVMGTIVNAFSCYTVLAPVLCKRQQYCQLMSKLLGNHQLVYNCHTFGRFLAPNLTY 122
Query: 249 VFLCL 235
+ + L
Sbjct: 123 LLVAL 127
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/40 (22%), Positives = 21/40 (52%)
Frame = -3
Query: 411 VHAVLCDFSDFTVVKLLT*CKKRVCELSAKHETVFVLVIQ 292
++ VL ++ DF+ + K + ++ T F+++IQ
Sbjct: 303 INVVLNNYPDFSAAGFFSINKTTLLQIIGNVTTFFIIIIQ 342
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 643 HVDIPYNILIRTNPFFYTNNII 708
+VD+ + I IR +Y N+I
Sbjct: 198 YVDVTFTIKIRRRTLYYFFNLI 219
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 643 HVDIPYNILIRTNPFFYTNNII 708
+VD+ + I IR +Y N+I
Sbjct: 198 YVDVTFTIKIRRRTLYYFFNLI 219
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 643 HVDIPYNILIRTNPFFYTNNII 708
+VD+ + I IR +Y N+I
Sbjct: 198 YVDVTFTIKIRRRTLYYFFNLI 219
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 643 HVDIPYNILIRTNPFFYTNNII 708
+VD+ + I IR +Y N+I
Sbjct: 198 YVDVTFTIKIRRRTLYYFFNLI 219
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 643 HVDIPYNILIRTNPFFYTNNII 708
+VD+ + I IR +Y N+I
Sbjct: 198 YVDVTFTIKIRRRTLYYFFNLI 219
>AJ969955-1|CAI94742.1| 160|Tribolium castaneum torso-like protein
protein.
Length = 160
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 111 PWRSPESAQLKPHTGNH 161
PW + Q+K +GNH
Sbjct: 141 PWFAEHMGQIKVASGNH 157
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 568 GTGAGSARGGLSSFRWRPQPARAP 639
G G+G+ + + RP PAR+P
Sbjct: 100 GAGSGNLSPQIQTQVARPPPARSP 123
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 568 GTGAGSARGGLSSFRWRPQPARAP 639
G G+G+ + + RP PAR+P
Sbjct: 100 GAGSGNLSPQIQTQVARPPPARSP 123
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,855
Number of Sequences: 336
Number of extensions: 3013
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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