Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31384
(743 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 32 0.007
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 27 0.14
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.19
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.19
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 26 0.32
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 26 0.43
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 25 0.75
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 24 1.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 5.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 5.3
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 7.0
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 7.0
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 7.0
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.2
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.2
DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein. 21 9.2
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.2
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 9.2
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 9.2
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 31.9 bits (69), Expect = 0.007
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 637 PSHVDIPYNILIRTNPFFYT-NNIISTVLYNFL 732
P+ DI + I+IR FYT N I+ TVL +FL
Sbjct: 218 PTETDITFYIIIRRKTLFYTVNLILPTVLISFL 250
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.14
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 583 SARGGLSSFRWRPQPARAPSHVDIPYNILIRTNPFFYT-NNIISTVLYNFLPL 738
SAR + + P+P + DI Y I +R P FY N I+ +L N + L
Sbjct: 185 SARRNVEYYSCCPEP-----YPDITYEIRLRRRPMFYVFNLILPCILINSVAL 232
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.1 bits (57), Expect = 0.19
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 643 HVDIPYNILIRTNPFFYTNNII 708
++DI +NI +R FYT NII
Sbjct: 231 YLDITFNITMRRKTLFYTVNII 252
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.1 bits (57), Expect = 0.19
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 643 HVDIPYNILIRTNPFFYTNNII 708
++DI +NI +R FYT NII
Sbjct: 231 YLDITFNITMRRKTLFYTVNII 252
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 26.2 bits (55), Expect = 0.32
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 643 HVDIPYNILIRTNPFFYTNNII 708
++DI +NI +R FYT N+I
Sbjct: 227 YLDITFNITMRRKTLFYTVNLI 248
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 25.8 bits (54), Expect = 0.43
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 625 PARAPSHVDIPYNILIRTNPFFYTNNII 708
P + DI +NI +R FYT N+I
Sbjct: 230 PCCTEPYSDITFNITMRRKTLFYTVNLI 257
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 25.0 bits (52), Expect = 0.75
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 649 DIPYNILIRTNPFFYTNNII 708
DI +NI +R FYT N+I
Sbjct: 225 DIVFNITLRRKTLFYTVNLI 244
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 649 DIPYNILIRTNPFFYTNNII 708
DI +NI +R FYT N+I
Sbjct: 224 DIFFNITLRRKTLFYTVNLI 243
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/34 (23%), Positives = 15/34 (44%)
Frame = +1
Query: 433 IPYAAFLKKVMA*KTSQLVISLVIRSFPATNVRW 534
+PY + KV A L + + +P ++W
Sbjct: 519 LPYIRLIPKVTAVAGETLRLKCPVAGYPIEEIKW 552
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/34 (23%), Positives = 15/34 (44%)
Frame = +1
Query: 433 IPYAAFLKKVMA*KTSQLVISLVIRSFPATNVRW 534
+PY + KV A L + + +P ++W
Sbjct: 519 LPYIRLIPKVTAVAGETLRLKCPVAGYPIEEIKW 552
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.8 bits (44), Expect = 7.0
Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 8/43 (18%)
Frame = +1
Query: 595 GLSSFRWRPQPARAPSHV--------DIPYNILIRTNPFFYTN 699
G +F++ QP P + +PYN+L+ +PF +N
Sbjct: 585 GSETFKYSSQPYGFPERLLLPKGKKEGMPYNVLVVVSPFDDSN 627
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.8 bits (44), Expect = 7.0
Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 8/43 (18%)
Frame = +1
Query: 595 GLSSFRWRPQPARAPSHV--------DIPYNILIRTNPFFYTN 699
G +F++ QP P + +PYN+L+ +PF +N
Sbjct: 585 GSETFKYSSQPYGFPERLLLPKGKKEGMPYNVLVVVSPFDDSN 627
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 450 PEEGHGVEDITTRHIFSYKILS 515
P EG + D RHI IL+
Sbjct: 364 PSEGEDISDYKFRHITEITILT 385
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 643 HVDIPYNILIRTNPFFYTNNII 708
+VD+ + I IR +Y N+I
Sbjct: 181 YVDVTFTIQIRRRTLYYFFNLI 202
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 643 HVDIPYNILIRTNPFFYTNNII 708
+VD+ + I IR +Y N+I
Sbjct: 181 YVDVTFTIQIRRRTLYYFFNLI 202
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 643 HVDIPYNILIRTNPFFYTNNII 708
+VD+ + I IR +Y N+I
Sbjct: 181 YVDVTFTIQIRRRTLYYFFNLI 202
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 643 HVDIPYNILIRTNPFFYTNNII 708
+VD+ + I IR +Y N+I
Sbjct: 181 YVDVTFTIQIRRRTLYYFFNLI 202
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 643 HVDIPYNILIRTNPFFYTNNII 708
+VD+ + I IR +Y N+I
Sbjct: 181 YVDVTFTIQIRRRTLYYFFNLI 202
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 643 HVDIPYNILIRTNPFFYTNNII 708
+VD+ + I IR +Y N+I
Sbjct: 181 YVDVTFTIQIRRRTLYYFFNLI 202
>DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein.
Length = 135
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -2
Query: 304 SCHTASDIPGNLHTLPGLCLSLLG 233
S T ++ LHT+ +C+ +G
Sbjct: 15 SAMTLDELKSGLHTVQSVCMKEIG 38
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 643 HVDIPYNILIRTNPFFYTNNII 708
+VD+ + I IR +Y N+I
Sbjct: 249 YVDVTFTIQIRRRTLYYFFNLI 270
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 643 HVDIPYNILIRTNPFFYTNNII 708
+VD+ + I IR +Y N+I
Sbjct: 249 YVDVTFTIQIRRRTLYYFFNLI 270
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +1
Query: 643 HVDIPYNILIRTNPFFYTNNII 708
++DI + ++IR +Y N+I
Sbjct: 218 YIDITFVVIIRRRTLYYFFNLI 239
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.4 bits (43), Expect = 9.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 179 QRRRARSCSHSKSSFPSTAKQRKTKTRER 265
+R+R S ++S S A KTK R +
Sbjct: 215 KRKRKSSTIENESETESNASSTKTKMRRK 243
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,689
Number of Sequences: 438
Number of extensions: 3767
Number of successful extensions: 25
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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