Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31381
         (709 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    28   0.25 
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    27   0.76 
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   3.1  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    25   3.1  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   5.4  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   9.4  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 20/85 (23%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
 Frame = -3

Query: 707 EERQKRQDYDLKELKERQKQQLR--HKALKKGLDP--EALTGKHPPKIQVASKYERRVDT 540
           E+  +R    + E KE++ +Q+R  ++A+++  +     L  K   + ++ +K  R    
Sbjct: 327 EQELERLKITIAE-KEKELEQVRPRYEAMRRKEEECSRELNLKEQKRKELYAKQGRGSQF 385

Query: 539 RSYDDKKKLFEGDLEKLNKDFLEKV 465
            S +++ K  +G+L+ LNK   +K+
Sbjct: 386 SSKEERDKWIQGELKSLNKQIKDKI 410


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 26.6 bits (56), Expect = 0.76
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -3

Query: 530  DDKKKL--FEGDLEKLNKDFLEKVWQERAEQFGGRQKARLP 414
            DDKKK+     DL++  K  L+  W E  E FG      LP
Sbjct: 1008 DDKKKIQAIITDLDEEKKKKLKVAWSEVDENFGSIFSTLLP 1048


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = -2

Query: 708 RREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSVQVREACR 544
           +RE KET +R ++ QR+ K    A+  Q         R+   Q+ ++++  +  R
Sbjct: 249 KRELKETMIRNQQLQRQRKQELIAEEQQSLEVIEGEMRRQQEQDRAALEASKEMR 303


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 626 KKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLFE 507
           K+  D    T K    ++V  +YER   T   D   KLFE
Sbjct: 243 KEAEDTNDKTSKKTTLMEVTGQYERTFITFENDIDNKLFE 282


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = -3

Query: 533  YDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGK 387
            Y     LF+    + NK+   K   +  EQFG + +    KW   R  K
Sbjct: 974  YKQYPHLFKDYFSQYNKN--HKYQNDYYEQFGNKNQEEFQKWSTTRIAK 1020


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 121 YCYYNMNKIFLL 86
           YC Y  NK+FLL
Sbjct: 131 YCNYTSNKLFLL 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 443,786
Number of Sequences: 2352
Number of extensions: 6490
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)