Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31381
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 96 2e-20
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 96 2e-20
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 93 1e-19
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 93 1e-19
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 79 3e-15
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 72 4e-13
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 72 5e-13
Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 31 0.81
U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t prot... 31 0.81
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 31 0.81
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.1
U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily ass... 31 1.1
DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein. 31 1.1
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 30 1.9
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical p... 30 1.9
Z81097-11|CAB03170.2| 485|Caenorhabditis elegans Hypothetical p... 30 1.9
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 30 1.9
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 29 4.3
AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical ... 29 4.3
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 29 4.3
U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical pr... 28 5.7
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 28 5.7
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 28 7.5
U23139-6|AAK31489.2| 520|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 7.5
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z70270-3|CAA94227.1| 153|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 27 9.9
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 96.3 bits (229), Expect = 2e-20
Identities = 49/98 (50%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Frame = -3
Query: 707 EERQKRQDYDLKELKERQKQQLRHKALKKGLDP-EALTGKHPPKIQVASKYERRVDTRSY 531
E+R++RQDYD+KEL ERQ+Q R+KALKKGLDP EA + HPPKI ASK++R+ D RSY
Sbjct: 254 EKRRERQDYDMKELHERQRQAARNKALKKGLDPEEAASSVHPPKITTASKFDRQTDRRSY 313
Query: 530 DDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARL 417
D++ LFE E+ + + AE +G +Q L
Sbjct: 314 GDRRYLFENPEEEKQASLVRGTGRPPAE-WGRKQNEEL 350
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 96.3 bits (229), Expect = 2e-20
Identities = 49/98 (50%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Frame = -3
Query: 707 EERQKRQDYDLKELKERQKQQLRHKALKKGLDP-EALTGKHPPKIQVASKYERRVDTRSY 531
E+R++RQDYD+KEL ERQ+Q R+KALKKGLDP EA + HPPKI ASK++R+ D RSY
Sbjct: 254 EKRRERQDYDMKELHERQRQAARNKALKKGLDPEEAASSVHPPKITTASKFDRQTDRRSY 313
Query: 530 DDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARL 417
D++ LFE E+ + + AE +G +Q L
Sbjct: 314 GDRRYLFENPEEEKQASLVRGTGRPPAE-WGRKQNEEL 350
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 93.5 bits (222), Expect = 1e-19
Identities = 44/73 (60%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Frame = -3
Query: 707 EERQKRQDYDLKELKERQKQQLRHKALKKGLDP-EALTGKHPPKIQVASKYERRVDTRSY 531
E+R++RQ+YDLKEL ERQ+Q R+KALKKGLDP EA + HPPKI ASK++R+ D RSY
Sbjct: 159 EKRRERQEYDLKELNERQRQVARNKALKKGLDPEEAASSVHPPKITTASKFDRQTDRRSY 218
Query: 530 DDKKKLFEGDLEK 492
D++ LFE K
Sbjct: 219 GDRRYLFENPFVK 231
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 93.5 bits (222), Expect = 1e-19
Identities = 44/73 (60%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Frame = -3
Query: 707 EERQKRQDYDLKELKERQKQQLRHKALKKGLDP-EALTGKHPPKIQVASKYERRVDTRSY 531
E+R++RQ+YDLKEL ERQ+Q R+KALKKGLDP EA + HPPKI ASK++R+ D RSY
Sbjct: 263 EKRRERQEYDLKELNERQRQVARNKALKKGLDPEEAASSVHPPKITTASKFDRQTDRRSY 322
Query: 530 DDKKKLFEGDLEK 492
D++ LFE K
Sbjct: 323 GDRRYLFENPFVK 335
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 79.0 bits (186), Expect = 3e-15
Identities = 33/68 (48%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Frame = -3
Query: 707 EERQKRQDYDLKELKERQKQQLRHKALKKGLDP-EALTGKHPPKIQVASKYERRVDTRSY 531
E+R +RQ+YD+KEL ERQ+Q R+ ALKKG+DP E ++P K+Q+ SKY+R+VD R++
Sbjct: 1074 EKRHERQEYDMKELNERQRQVTRNSALKKGIDPAEVGNTRYPAKVQIVSKYDRQVDRRNF 1133
Query: 530 DDKKKLFE 507
+++ +F+
Sbjct: 1134 RERRSVFD 1141
Score = 31.1 bits (67), Expect = 0.81
Identities = 17/76 (22%), Positives = 39/76 (51%)
Frame = -3
Query: 707 EERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYD 528
E+ K QDY+ + ER+K++ K LK+ + L + K ++ + D R +
Sbjct: 901 EQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEK-EMEERRRAADDRRRQE 959
Query: 527 DKKKLFEGDLEKLNKD 480
++++ + D ++ N++
Sbjct: 960 EEERKAKVDQDRRNRE 975
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 72.1 bits (169), Expect = 4e-13
Identities = 29/71 (40%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = -3
Query: 707 EERQKRQDYDLKELKERQKQQLRHKALKKG-LDPEALTGKHPPKIQVASKYERRVDTRSY 531
E+R +RQ+YDLKEL ER +Q R K G + + G+HPPK+Q++SKY+R++D R++
Sbjct: 238 EKRHERQEYDLKELNERSRQVARANNAKNGQVSGDDTGGRHPPKVQISSKYDRQIDRRNF 297
Query: 530 DDKKKLFEGDL 498
++++++E +
Sbjct: 298 KERRQVYENKI 308
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/91 (21%), Positives = 45/91 (49%)
Frame = -3
Query: 707 EERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYD 528
+E+ K +DY+ ER+K++ + LK+ L + + + A + + R +
Sbjct: 61 DEQAKLEDYEKARRSEREKEEEELEKLKEKQAQRKLAREQEER-EAAERKRLDEERRQKE 119
Query: 527 DKKKLFEGDLEKLNKDFLEKVWQERAEQFGG 435
++++ + EK K+ EK+ ++A+ GG
Sbjct: 120 EQERRARAEEEKKRKE-EEKL--KKAQMMGG 147
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 71.7 bits (168), Expect = 5e-13
Identities = 29/68 (42%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Frame = -3
Query: 707 EERQKRQDYDLKELKERQKQQLRHKALKKG-LDPEALTGKHPPKIQVASKYERRVDTRSY 531
E+R +RQ+YDLKEL ER +Q R K G + + G+HPPK+Q++SKY+R++D R++
Sbjct: 238 EKRHERQEYDLKELNERSRQVARANNAKNGQVSGDDTGGRHPPKVQISSKYDRQIDRRNF 297
Query: 530 DDKKKLFE 507
++++++E
Sbjct: 298 KERRQVYE 305
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/91 (21%), Positives = 45/91 (49%)
Frame = -3
Query: 707 EERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYD 528
+E+ K +DY+ ER+K++ + LK+ L + + + A + + R +
Sbjct: 61 DEQAKLEDYEKARRSEREKEEEELEKLKEKQAQRKLAREQEER-EAAERKRLDEERRQKE 119
Query: 527 DKKKLFEGDLEKLNKDFLEKVWQERAEQFGG 435
++++ + EK K+ EK+ ++A+ GG
Sbjct: 120 EQERRARAEEEKKRKE-EEKL--KKAQMMGG 147
>Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical
protein T13F3.8 protein.
Length = 212
Score = 31.1 bits (67), Expect = 0.81
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = -3
Query: 707 EERQKRQDYDLK--ELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRS 534
EE++K + + K E KE +K+ K +K + + K + + K E + D
Sbjct: 66 EEKKKEEKVEKKPEENKEAEKKDEPKKEEEKKEEEKKKEEKKEEEKKEEVKEEEKKDDSK 125
Query: 533 YDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPK 411
D+KKK E + NK+ EK +E+ E +++ +P+
Sbjct: 126 RDEKKKDGEKKEDDENKEDNEKKKEEKKEDEKPKKEEIVPQ 166
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 31.1 bits (67), Expect = 0.81
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = -2
Query: 696 KETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAP-AQNSSSVQVREACRHTILRRQK 520
+ET L+ + +KT + SS++ +PR R+AP + +SSS +R+A R + R++
Sbjct: 342 RETNRTLEESLKKTLKINK--SSEKMEKPRKDIRRAPRSSSSSSSTLRDAEREQDIERRR 399
Query: 519 E 517
E
Sbjct: 400 E 400
>U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t protein
3, isoform c protein.
Length = 279
Score = 31.1 bits (67), Expect = 0.81
Identities = 17/76 (22%), Positives = 39/76 (51%)
Frame = -3
Query: 707 EERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYD 528
E+ K QDY+ + ER+K++ K LK+ + L + K ++ + D R +
Sbjct: 67 EQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEK-EMEERRRAADDRRRQE 125
Query: 527 DKKKLFEGDLEKLNKD 480
++++ + D ++ N++
Sbjct: 126 EEERKAKVDQDRRNRE 141
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 31.1 bits (67), Expect = 0.81
Identities = 17/76 (22%), Positives = 39/76 (51%)
Frame = -3
Query: 707 EERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYD 528
E+ K QDY+ + ER+K++ K LK+ + L + K ++ + D R +
Sbjct: 67 EQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEK-EMEERRRAADDRRRQE 125
Query: 527 DKKKLFEGDLEKLNKD 480
++++ + D ++ N++
Sbjct: 126 EEERKAKVDQDRRNRE 141
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/64 (26%), Positives = 37/64 (57%)
Frame = -3
Query: 671 ELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGDLEK 492
++KE ++ + + K L+ ++ PK +ASK+ER+ +++ D++ LF + +K
Sbjct: 221 KIKELHQRICKLETEKYDLEKRHERQEYDPKQLIASKFERQ-RVQTFSDRRALFT-NTKK 278
Query: 491 LNKD 480
L+ D
Sbjct: 279 LDTD 282
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Frame = -3
Query: 707 EERQKRQDYDLKELKERQKQQL---RHKALKKGLDPEALTGKHPPKIQVASKYERRVDTR 537
E R + ++ + E KER++QQ R A ++ ++ +A ++ + R+ +
Sbjct: 138 EHRDREKERERDERKERERQQKEKEREDAARREIEEKA--EMDAKRVAEEEEERRKEKEK 195
Query: 536 SYDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELE 369
++KKK E EK + EK + E+ R+K R + ER +++ E E
Sbjct: 196 RREEKKKQKELLKEKERSERKEKERELEREKEKSREKEREKEREKEREKEREKERE 251
>U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 326 protein.
Length = 560
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = -3
Query: 668 LKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGDLEKL 489
+ E++K++L HK L G D E + K K + K E+R + DKKK + +
Sbjct: 247 MTEKEKKKL-HKKLMSGADLEDVMKKKSKKEKKKEKKEKRKNKDKKKDKKKNKKSKSRET 305
Query: 488 NKDF----LEKVWQERAEQFGGRQKARLPKW 408
+ D E W+E++ + R+ P++
Sbjct: 306 DDDSDGSDSEDDWKEKSSKRIKREVESSPEY 336
>DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein.
Length = 560
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = -3
Query: 668 LKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGDLEKL 489
+ E++K++L HK L G D E + K K + K E+R + DKKK + +
Sbjct: 247 MTEKEKKKL-HKKLMSGADLEDVMKKKSKKEKKKEKKEKRKNKDKKKDKKKNKKSKSRET 305
Query: 488 NKDF----LEKVWQERAEQFGGRQKARLPKW 408
+ D E W+E++ + R+ P++
Sbjct: 306 DDDSDGSDSEDDWKEKSSKRIKREVESSPEY 336
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 29.9 bits (64), Expect = 1.9
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Frame = -3
Query: 707 EERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYD 528
+E Q++ + K KE++ Q+ ++ L + L E G H K++ +K E+ +D
Sbjct: 989 DEMQQQDEAIAKLNKEKKHQEEINRKLMEDLQSEEDKGNHQNKVK--AKLEQTLDDLEDS 1046
Query: 527 -DKKKLFEGDLEKLNK--DFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELES 366
+++K DL+K + + K+ QE ++ GRQ+ L KK+ EL S
Sbjct: 1047 LEREKRARADLDKQKRKVEGELKIAQENIDE-SGRQRHDLE----NNLKKKESELHS 1098
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 29.9 bits (64), Expect = 1.9
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Frame = -3
Query: 707 EERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYD 528
+E Q++ + K KE++ Q+ ++ L + L E G H K++ +K E+ +D
Sbjct: 989 DEMQQQDEAIAKLNKEKKHQEEINRKLMEDLQSEEDKGNHQNKVK--AKLEQTLDDLEDS 1046
Query: 527 -DKKKLFEGDLEKLNK--DFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELES 366
+++K DL+K + + K+ QE ++ GRQ+ L KK+ EL S
Sbjct: 1047 LEREKRARADLDKQKRKVEGELKIAQENIDE-SGRQRHDLE----NNLKKKESELHS 1098
>Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical
protein K07A1.9b protein.
Length = 457
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = -3
Query: 701 RQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDK 522
RQK D D+ + RQK R + ++ +D KH ++++ S TR ++
Sbjct: 169 RQKNLDPDVVRTERRQKDAARQRTIQSYIDEARPDWKHKLEVKLVSLGGDEFGTRD-NES 227
Query: 521 KKLFEGDLEKLNKD 480
+L++ ++KD
Sbjct: 228 FELYKNYQHTIHKD 241
>Z81097-11|CAB03170.2| 485|Caenorhabditis elegans Hypothetical
protein K07A1.9a protein.
Length = 485
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = -3
Query: 701 RQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDK 522
RQK D D+ + RQK R + ++ +D KH ++++ S TR ++
Sbjct: 197 RQKNLDPDVVRTERRQKDAARQRTIQSYIDEARPDWKHKLEVKLVSLGGDEFGTRD-NES 255
Query: 521 KKLFEGDLEKLNKD 480
+L++ ++KD
Sbjct: 256 FELYKNYQHTIHKD 269
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 29.9 bits (64), Expect = 1.9
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Frame = -3
Query: 707 EERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYD 528
+E Q++ + K KE++ Q+ ++ L + L E G H K++ +K E+ +D
Sbjct: 992 DEMQQQDEAIAKLNKEKKHQEEINRKLMEDLQSEEDKGNHQNKVK--AKLEQTLDDLEDS 1049
Query: 527 -DKKKLFEGDLEKLNK--DFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELES 366
+++K DL+K + + K+ QE ++ GRQ+ L KK+ EL S
Sbjct: 1050 LEREKRARADLDKQKRKVEGELKIAQENIDE-SGRQRHDLE----NNLKKKESELHS 1101
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/97 (23%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Frame = -3
Query: 704 ERQKRQDYDLKELKERQKQQLRHKALKKGLDPEA-LTGKHPPKIQVASKYERRVDTRSYD 528
++++ ++ +KE +E+Q++ L +A KK + EA L + KI K ++ ++ +
Sbjct: 528 KQREEEEARIKEEEEKQRKILEEEARKKQEEEEARLKAEEELKIYEEEKRKKELE----E 583
Query: 527 DKKKLFEGDLE-KLNKDFLEKVWQERAEQFGGRQKAR 420
++KK E +++ K ++ +K +E ++ +KAR
Sbjct: 584 ERKKKEELEIKRKAEEEKKKKALEEEKKRKIAEEKAR 620
>Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical
protein T27F2.1 protein.
Length = 535
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Frame = -2
Query: 705 REAKETGLRLKR--AQRKT--KAATEAQSSQEGSRPRSAHRQAPAQNSSSVQVREACRHT 538
RE ET +L+R AQ K + A A+++ + + RSA R+ ++ V+VRE R
Sbjct: 302 REEVETRAQLERRVAQNKKSEQEAKMAEAAAKARQERSAMRRKDDEDDEQVKVREEIRRD 361
Query: 537 IL---RRQKETVRG*PRETEQ 484
L R+++ R P + ++
Sbjct: 362 RLDDIRKERNIARSRPDKADK 382
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/102 (20%), Positives = 48/102 (47%)
Frame = -3
Query: 689 QDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF 510
+D ++ E ++++ R + LK+ + E GK PPK + A K + DD+++
Sbjct: 19 EDLEMARQIENERKEKRAQKLKEKRERE---GKPPPKKRPAKKRKASSSEEDDDDEEESP 75
Query: 509 EGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKK 384
+K K + + +++ R+K++ K ++ +K
Sbjct: 76 RKSSKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEK 117
>AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical
protein C50D2.8 protein.
Length = 319
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = -2
Query: 702 EAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQA-PAQNSSSVQVREACRH 541
+A+ET R +R +++ +AAT + + + R RS HR + +++S + R RH
Sbjct: 251 QAEETK-RKERREKRAEAATTSDTERRRHRSRSPHRSSHDSRDSRDSRDRREHRH 304
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/102 (20%), Positives = 48/102 (47%)
Frame = -3
Query: 689 QDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF 510
+D ++ E ++++ R + LK+ + E GK PPK + A K + DD+++
Sbjct: 19 EDLEMARQIENERKEKRAQKLKEKRERE---GKPPPKKRPAKKRKASSSEEDDDDEEESP 75
Query: 509 EGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKK 384
+K K + + +++ R+K++ K ++ +K
Sbjct: 76 RKSSKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEK 117
>U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical
protein R08C7.5 protein.
Length = 491
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Frame = -3
Query: 599 TGKHPPKIQVASKYERRVDTRSYDDKKKL-----FEGDLEKLNKDFLEKVWQERAEQFGG 435
T H PK E D+ DK K + D+ +N+++ + + FG
Sbjct: 406 TRVHKPKSATDYGVESESDSDFERDKSKQKNFPKWASDMNIVNEEYAKNLEFNVNTFFGS 465
Query: 434 RQKARLPKWFGERPGKKK 381
+KA L + FGE KKK
Sbjct: 466 MEKANLTEIFGEMVRKKK 483
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 28.3 bits (60), Expect = 5.7
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Frame = -3
Query: 707 EERQKRQDYDLKELKERQKQQLRHKALK-KGLDPEALTGKHPPKIQ---VASKYERRVDT 540
EER K ++ +K KER K++++ + + K + + K K + + S E R
Sbjct: 902 EERLKAEEEKVKVEKERNKEKVKAEEERLKAEEEKVKIEKEKVKAEEQKIKSAEEERRKE 961
Query: 539 RSYDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKAR 420
R+ +D KK+ EG EK+ L QER ++ R+K +
Sbjct: 962 RA-EDAKKVKEGQ-EKI--AMLNAENQERKDRSEARRKQK 997
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = -3
Query: 707 EERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYD 528
+E+ K + +E KE++K++ KK DP+ K P ++ +++ VD +
Sbjct: 98 KEKSKNEGSKKEEDKEKEKEKSNKAEDKKSEDPKKEDAK-KPDVKGKDTFKKPVDESAVA 156
Query: 527 DKKKLFEGDLEKLNKD 480
KK L LN D
Sbjct: 157 PKKDPNYQTLCGLNND 172
>U23139-6|AAK31489.2| 520|Caenorhabditis elegans Hypothetical
protein F13H8.8 protein.
Length = 520
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -2
Query: 696 KETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSVQVR 556
K R K+ R+ K+ + + +Q+GS R H++ ++N S Q+R
Sbjct: 153 KRNSSRRKKNGRRKKS--DVRKAQQGSDERKKHKKQNSKNLSKEQIR 197
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 27.9 bits (59), Expect = 7.5
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = -2
Query: 681 RLKRAQRKTKAATEAQSSQEGSRPRSAHR---QAPAQNSSSVQVREACRHTILRRQ--KE 517
R K+ +R +++ + SS+ SR R R + +SSS + R RH +Q KE
Sbjct: 151 RKKKGERSGSSSSSSGSSRSPSRGRRGGRGGRSGSSSSSSSSESRSPGRHEEPEKQGKKE 210
Query: 516 TVRG*PRETEQGLPREGVAREGRTVRRQAKG 424
++ ++ +G+ G R G R+ G
Sbjct: 211 ELKQLKKQKSEGVEHRG--RSGSPGGRRGHG 239
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 27.5 bits (58), Expect = 9.9
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Frame = -3
Query: 704 ERQKRQDYDLKELKERQKQ---QLRHKALKKGLDPEALTGKHPPKIQVASK-YERRVD-- 543
ERQ + Y+ +E KE+ ++ Q K LK L+ + K PK +S+ ++R+ D
Sbjct: 335 ERQMSKRYEREERKEKDRKKTLQKEGKRLKLFLE-DYDDEKDDPKYYTSSQFFQRKRDYE 393
Query: 542 -TRSYDDKKKLFE-GDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELE 369
R D K ++ E ++E+L + +E+ + E ++AR E +K +
Sbjct: 394 REREADQKDRMQEQQEIEELKRQIMEEAAND--ESINIEEEARKRHKLKEEEAMRKMRAD 451
Query: 368 S 366
S
Sbjct: 452 S 452
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 27.5 bits (58), Expect = 9.9
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Frame = -3
Query: 704 ERQKRQDYDLKELKERQKQ---QLRHKALKKGLDPEALTGKHPPKIQVASK-YERRVD-- 543
ERQ + Y+ +E KE+ ++ Q K LK L+ + K PK +S+ ++R+ D
Sbjct: 335 ERQMSKRYEREERKEKDRKKTLQKEGKRLKLFLE-DYDDEKDDPKYYTSSQFFQRKRDYE 393
Query: 542 -TRSYDDKKKLFE-GDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELE 369
R D K ++ E ++E+L + +E+ + E ++AR E +K +
Sbjct: 394 REREADQKDRMQEQQEIEELKRQIMEEAAND--ESINIEEEARKRHKLKEEEAMRKMRAD 451
Query: 368 S 366
S
Sbjct: 452 S 452
>Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical
protein W04D2.6b protein.
Length = 547
Score = 27.5 bits (58), Expect = 9.9
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Frame = -3
Query: 704 ERQKRQDYDLKELKERQKQ---QLRHKALKKGLDPEALTGKHPPKIQVASK-YERRVD-- 543
ERQ + Y+ +E KE+ ++ Q K LK L+ + K PK +S+ ++R+ D
Sbjct: 177 ERQMSKRYEREERKEKDRKKTLQKEGKRLKLFLE-DYDDEKDDPKYYTSSQFFQRKRDYE 235
Query: 542 -TRSYDDKKKLFE-GDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELE 369
R D K ++ E ++E+L + +E+ + E ++AR E +K +
Sbjct: 236 REREADQKDRMQEQQEIEELKRQIMEEAAND--ESINIEEEARKRHKLKEEEAMRKMRAD 293
Query: 368 S 366
S
Sbjct: 294 S 294
>Z70270-3|CAA94227.1| 153|Caenorhabditis elegans Hypothetical
protein C53D6.5 protein.
Length = 153
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 551 RVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQER 453
R T + ++KL + L+K D L+K WQER
Sbjct: 85 RQRTEKLEIEQKLKDPKLDKATSDELKKQWQER 117
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -3
Query: 473 EKVWQERAEQFGGRQKARLPKWFGERP--GKKKGELE 369
E + Q+RA+Q GRQK K G +P GK K ++E
Sbjct: 555 ESLAQQRAKQKDGRQKQYGKKSMGPKPPNGKPKEKIE 591
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,774,461
Number of Sequences: 27780
Number of extensions: 158452
Number of successful extensions: 818
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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