Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31378
         (391 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    24   1.7  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    22   6.9  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    22   9.1  

>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 10/35 (28%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = +3

Query: 105 HRQFVGIGKTVFMVTIDSCQP--ERELQKKKQKKS 203
           H +++G+ + ++  T+DS     E + + KKQ++S
Sbjct: 139 HNKYIGVSRKIYHGTVDSVAKIYEAKPEIKKQEES 173


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = -1

Query: 220 YITVMVLFFCFFF 182
           Y+T++V ++C+ F
Sbjct: 353 YLTILVQYYCYLF 365


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 153 DSCQPERELQKKKQKKSTITV 215
           +S     ELQ+ K KKST T+
Sbjct: 355 ESADEPGELQRAKSKKSTDTL 375


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 323,426
Number of Sequences: 2352
Number of extensions: 4761
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)