Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31378
         (391 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217994-1|AAG17236.1|  353|Homo sapiens unknown protein.              33   0.43 
X55188-1|CAA38971.1|  339|Homo sapiens lymphocyte antigen protein.     29   4.0  
S67783-1|AAB29545.1|  336|Homo sapiens lymphocyte-specific prote...    29   4.0  
M33552-1|AAA59534.1|  339|Homo sapiens LSP1 protein.                   29   4.0  
CR541754-1|CAG46554.1|  339|Homo sapiens LSP1 protein.                 29   4.0  
CR541728-1|CAG46529.1|  339|Homo sapiens LSP1 protein.                 29   4.0  
BC001785-1|AAH01785.1|  339|Homo sapiens lymphocyte-specific pro...    29   4.0  
AK222733-1|BAD96453.1|  339|Homo sapiens lymphocyte-specific pro...    29   4.0  
DQ926285-1|ABK81503.1|  118|Homo sapiens immunoglobulin heavy ch...    29   7.1  

>AF217994-1|AAG17236.1|  353|Homo sapiens unknown protein.
          Length = 353

 Score = 32.7 bits (71), Expect = 0.43
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +1

Query: 331 KKKKKNSRGGPVPNS 375
           KKKKKNSRGGPVP +
Sbjct: 46  KKKKKNSRGGPVPGN 60


>X55188-1|CAA38971.1|  339|Homo sapiens lymphocyte antigen protein.
          Length = 339

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 302 DSCQHERELQKKKKKTRGGARYPIRP 379
           + CQHER+ Q + +   GG   P RP
Sbjct: 34  EQCQHERDRQLQAQDEEGGGHVPERP 59


>S67783-1|AAB29545.1|  336|Homo sapiens lymphocyte-specific protein
           1 protein.
          Length = 336

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 302 DSCQHERELQKKKKKTRGGARYPIRP 379
           + CQHER+ Q + +   GG   P RP
Sbjct: 33  EQCQHERDRQLQAQDEEGGGHVPERP 58


>M33552-1|AAA59534.1|  339|Homo sapiens LSP1 protein.
          Length = 339

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 302 DSCQHERELQKKKKKTRGGARYPIRP 379
           + CQHER+ Q + +   GG   P RP
Sbjct: 34  EQCQHERDRQLQAQDEEGGGHVPERP 59


>CR541754-1|CAG46554.1|  339|Homo sapiens LSP1 protein.
          Length = 339

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 302 DSCQHERELQKKKKKTRGGARYPIRP 379
           + CQHER+ Q + +   GG   P RP
Sbjct: 34  EQCQHERDRQLQAQDEEGGGHVPERP 59


>CR541728-1|CAG46529.1|  339|Homo sapiens LSP1 protein.
          Length = 339

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 302 DSCQHERELQKKKKKTRGGARYPIRP 379
           + CQHER+ Q + +   GG   P RP
Sbjct: 34  EQCQHERDRQLQAQDEEGGGHVPERP 59


>BC001785-1|AAH01785.1|  339|Homo sapiens lymphocyte-specific
           protein 1 protein.
          Length = 339

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 302 DSCQHERELQKKKKKTRGGARYPIRP 379
           + CQHER+ Q + +   GG   P RP
Sbjct: 34  EQCQHERDRQLQAQDEEGGGHVPERP 59


>AK222733-1|BAD96453.1|  339|Homo sapiens lymphocyte-specific
           protein 1 variant protein.
          Length = 339

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 302 DSCQHERELQKKKKKTRGGARYPIRP 379
           + CQHER+ Q + +   GG   P RP
Sbjct: 34  EQCQHERDRQLQAQDEEGGGHVPERP 59


>DQ926285-1|ABK81503.1|  118|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 118

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 14  RANNEFLLYCCLKSFWVTYPMNCRLVQPRTS 106
           R+++  + YC    FW  YP    ++ PRT+
Sbjct: 87  RSDDTAIYYCARADFWGAYPSGMDVLGPRTT 117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,556,042
Number of Sequences: 237096
Number of extensions: 660877
Number of successful extensions: 1358
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1357
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)