Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31376
         (488 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q08738 Cluster: Larval cuticle protein LCP-30 precursor...   209   3e-53
UniRef50_UPI00004D976B Cluster: UPI00004D976B related cluster; n...    35   0.84 
UniRef50_A2QYY4 Cluster: Putative uncharacterized protein; n=1; ...    33   2.6  
UniRef50_A2FYW8 Cluster: Putative uncharacterized protein; n=14;...    33   3.4  
UniRef50_A5K9A5 Cluster: Putative uncharacterized protein; n=1; ...    32   6.0  
UniRef50_UPI0000EBCA66 Cluster: PREDICTED: hypothetical protein;...    32   7.9  
UniRef50_UPI0000D56367 Cluster: PREDICTED: similar to CG30042-PA...    32   7.9  

>UniRef50_Q08738 Cluster: Larval cuticle protein LCP-30 precursor;
           n=1; Bombyx mori|Rep: Larval cuticle protein LCP-30
           precursor - Bombyx mori (Silk moth)
          Length = 239

 Score =  209 bits (510), Expect = 3e-53
 Identities = 107/155 (69%), Positives = 107/155 (69%)
 Frame = +1

Query: 22  MRVFLAICLSLTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGR 201
           MRVFLAICLSLTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGR
Sbjct: 1   MRVFLAICLSLTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGR 60

Query: 202 YIPDNSGAYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEDLSKYLGDAYKGSSIXXXX 381
           YIPDNSGAYN                             KEDLSKYLGDAYKGSSI    
Sbjct: 61  YIPDNSGAYNGDRGDRGAAGGFYTGSGTAGGPGGAYVGTKEDLSKYLGDAYKGSSIVPLP 120

Query: 382 XXXXXXXXXXXXXXXASKVVTPTYVASKVVPPSGA 486
                          ASKVVTPTYVASKVVPPSGA
Sbjct: 121 VVKPTIPVPVTPTYVASKVVTPTYVASKVVPPSGA 155


>UniRef50_UPI00004D976B Cluster: UPI00004D976B related cluster; n=1;
           Xenopus tropicalis|Rep: UPI00004D976B UniRef100 entry -
           Xenopus tropicalis
          Length = 205

 Score = 35.1 bits (77), Expect = 0.84
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +2

Query: 410 SHPHTLPARWSHPHTLPARWSHP 478
           SHP+ LPA +SHP+ L A +SHP
Sbjct: 88  SHPNPLPAPYSHPNPLLAPYSHP 110



 Score = 35.1 bits (77), Expect = 0.84
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +2

Query: 410 SHPHTLPARWSHPHTLPARWSHP 478
           SHP+ L A +SHP+ LPA +SHP
Sbjct: 128 SHPNPLLAPYSHPNPLPAPYSHP 150



 Score = 34.3 bits (75), Expect = 1.5
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +2

Query: 410 SHPHTLPARWSHPHTLPARWSHP 478
           SHP+ LPA +SHP+ + A +SHP
Sbjct: 58  SHPNPLPAPYSHPNPILAPYSHP 80



 Score = 33.1 bits (72), Expect = 3.4
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +2

Query: 410 SHPHTLPARWSHPHTLPARWSHP 478
           SHP+ L   +SHP+ LPA +SHP
Sbjct: 48  SHPNPLLEPYSHPNPLPAPYSHP 70



 Score = 32.3 bits (70), Expect = 6.0
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +2

Query: 410 SHPHTLPARWSHPHTLPARWSHP 478
           SHP+ +   +SHP+ LPA +SHP
Sbjct: 78  SHPNPILEPYSHPNPLPAPYSHP 100


>UniRef50_A2QYY4 Cluster: Putative uncharacterized protein; n=1;
           Aspergillus niger|Rep: Putative uncharacterized protein
           - Aspergillus niger
          Length = 345

 Score = 33.5 bits (73), Expect = 2.6
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -3

Query: 129 WRNSRVNSVVLERSVLSSF--GGQRHCQRQADCQKDTHFRCY 10
           WR  R +  +LE SVL+    GG++H +  A+  +D H R Y
Sbjct: 204 WREGRTDEELLEISVLNLLRKGGKQHAKLDANIIEDEHIRAY 245


>UniRef50_A2FYW8 Cluster: Putative uncharacterized protein; n=14;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 645

 Score = 33.1 bits (72), Expect = 3.4
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -2

Query: 487 RRRWVGPPCWQRMWV*PPCWQRMWV*LAREW*ASRRAGEQCW 362
           +R  V   CWQR+ V   CWQR+ V +   W  +   GE CW
Sbjct: 70  QRAGVEDECWQRVGVEEECWQRV-VAVEESWQRAGVVGE-CW 109



 Score = 32.7 bits (71), Expect = 4.5
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = -2

Query: 487 RRRWVGPPCWQRMWV*PPCWQRMWV*LAREW*ASRRAG--EQCW 362
           +R  V   CWQR+   P CWQR+ V + + W   +RAG  ++CW
Sbjct: 460 QRAGVVGECWQRVVAVPRCWQRV-VAVPKCW---QRAGAEDECW 499


>UniRef50_A5K9A5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 523

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -3

Query: 477 GWDHLAGNVCGCDHLAGNVCGCDWHGNGR 391
           G +H+ GN  G +H++GN  G + HG G+
Sbjct: 337 GGNHIGGNHVGSNHVSGNHIGGNHHGGGQ 365


>UniRef50_UPI0000EBCA66 Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 255

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -2

Query: 199 GQSCRGWGHNGLDQLHSG-LAYRRMEKQ*SKLGCTGKECTFQFRRPAPLSETGR 41
           G +   WG   +D    G +A+RR  K+ S  GC G E    FR      E GR
Sbjct: 144 GAAAASWGRINIDSAPGGRVAWRRPPKRLSANGCHGNEAPSVFRWAEGGREAGR 197


>UniRef50_UPI0000D56367 Cluster: PREDICTED: similar to CG30042-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG30042-PA - Tribolium castaneum
          Length = 275

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +1

Query: 190 NSGRYIPDNSGAYN 231
           N GRY PDNSGAYN
Sbjct: 25  NDGRYYPDNSGAYN 38


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.316    0.134    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 440,935,976
Number of Sequences: 1657284
Number of extensions: 7637516
Number of successful extensions: 25187
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25084
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28019067077
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)