Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31374
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    66   3e-13
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    64   7e-13
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.9  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    21   6.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   6.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.7  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   8.7  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
            subunit 1 protein.
          Length = 682

 Score = 65.7 bits (153), Expect = 3e-13
 Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 24/175 (13%)
 Frame = +1

Query: 4    KMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFKEDSLPMAE 183
            ++FL P++DE G P+   +    F ELD F   +  G + ITR ST+ +     ++P   
Sbjct: 500  RIFLAPQFDERGNPWLFRNQKDMFIELDRFAVSLKQGTNTITRHSTESSL----TIPFER 555

Query: 184  IYKLLDQGKIPT-----DMFNSSDT-MPSRLMLPKGTYDGFPFQLFVFVYPY-------- 321
             ++ LD  + PT       FN      P  ++LPKGT  G+P  LFV +  Y        
Sbjct: 556  TFRNLDANR-PTGGDALSEFNFCGCGWPQHMLLPKGTEAGYPCHLFVMISNYADDRVEQD 614

Query: 322  -EPTPKESEPF----KSVVPDNKPFGYPFDRPVLP-----QYFKQPNMFFKKVLV 456
               T  + + F      + PD +  GYPFDR         Q F  PNM  ++V++
Sbjct: 615  TSGTCSDGDTFCGIKDKLYPDRRSMGYPFDRMPRDGVDTLQQFLTPNMRVQEVVI 669


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 64.5 bits (150), Expect = 7e-13
 Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
 Frame = +1

Query: 4   KMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFKEDSLPMAE 183
           ++FL PK DE G P+   D  + F ELD F   +  GQ+ ITR+S+  +     ++P   
Sbjct: 501 RIFLAPKTDERGNPWLFRDQKIMFIELDKFTVNLKQGQNTITRASSQSSV----TIPFER 556

Query: 184 IYKLLD----QGKIPTDMFNSSDT-MPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEP 348
            ++ LD    QG      FN      P  +++PKGT +G   QLFV +  Y+    +   
Sbjct: 557 TFRNLDLNRPQGGEELAQFNFCGCGWPQHMLIPKGTPEGMKSQLFVMISNYDDDKIDQST 616

Query: 349 -------------FKSVVPDNKPFGYPFDR 399
                           + PD +  GYPFDR
Sbjct: 617 EGVCNDAGSYCGIKDKLYPDRRSMGYPFDR 646


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 164 SSLKNAKSVDERVI*DWP 111
           S L+NAK VDE ++ + P
Sbjct: 471 SQLRNAKKVDEAILEERP 488


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 266 LRVHTMDSPSSCLY 307
           +R HT + P SC Y
Sbjct: 27  IRTHTGEKPFSCTY 40


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +2

Query: 104 LTLASLR*RVHLLTLHSSKKTLYRWPKSTSSWTKERFLLTCSTPRT 241
           + L++ R   +  T H + K +    + T SWT+       S P+T
Sbjct: 30  IDLSTFRVPTYGTTSHPTSKLVPPDERITYSWTEINAFANVSPPKT 75


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = +1

Query: 433 MFFKKVLVYHEGELFPYLFNI 495
           ++F +++VY    + P L+N+
Sbjct: 333 LYFCRIMVYLNSAINPILYNL 353


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +2

Query: 410 LSTSNNLTCSSRRSWSTMKENYSPIYLTFLTIHQIKRNYNA 532
           L   N +T     SW+ +    SP+Y + L     + N NA
Sbjct: 193 LDVINVMTYDFHGSWAGVTAQNSPLYASPLDGEWQRDNLNA 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,365
Number of Sequences: 336
Number of extensions: 3390
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)