Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31373
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   3.2  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   3.2  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   4.2  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   4.2  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   4.2  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   9.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.8  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +1

Query: 376 GGHASGFSHVTINEGTEKRLFQIKGKRNVRVKQVKP 483
           GG   G    T +E T   L   K +   RVK+ KP
Sbjct: 137 GGKGGGVIQGTASEATLVALLGAKARMIDRVKKEKP 172



 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +1

Query: 577 RMKAITVANQIKDQDHNGRADIEVVDSEAHDGNLRQVLRCPR 702
           R+KA    N+   +  NGR  I +V S+  D    ++  C R
Sbjct: 410 RLKASNEINEALLKRLNGRGVIHLVPSKIRDVYFLRLAICSR 451


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 16/63 (25%), Positives = 33/63 (52%)
 Frame = -3

Query: 582 HPLDSFRLLTHKDEDLMVYVQNEAVPVVQGLKCRFYLLNADVSFTLDLEESFLCSLIDRH 403
           +PL++F+L T   + L V+        V+    R Y +    SF +    +++C+L++ +
Sbjct: 5   NPLEAFKLNTFFLKALTVWH-------VENPTYRLYKIFVVFSFAVTFFSAWICALVNYN 57

Query: 402 VAE 394
           V+E
Sbjct: 58  VSE 60


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 211 ARNGCPMLDGP 179
           ARNG P +DGP
Sbjct: 460 ARNGSPNVDGP 470


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 211 ARNGCPMLDGP 179
           ARNG P +DGP
Sbjct: 460 ARNGSPNVDGP 470


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 211 ARNGCPMLDGP 179
           ARNG P +DGP
Sbjct: 462 ARNGSPNVDGP 472


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 500 FKDSNVGFTCLTRTFLL 450
           +KDSN+G       FLL
Sbjct: 103 YKDSNIGLVVANAFFLL 119


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 636 RYRSG*LRSARWESSTGSSMPSA 704
           RY +G L   +WE+ T    P+A
Sbjct: 595 RYGNGALMINQWENVTNIQCPNA 617


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 636 RYRSG*LRSARWESSTGSSMPSA 704
           RY +G L   +WE+ T    P+A
Sbjct: 595 RYGNGALMINQWENVTNIQCPNA 617


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,761
Number of Sequences: 336
Number of extensions: 3581
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)