Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31373
(704 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35) 143 1e-34
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 118 4e-27
SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 4e-12
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 58 9e-09
SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07) 57 2e-08
SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032) 53 2e-07
SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12) 52 6e-07
SB_14141| Best HMM Match : HH_signal (HMM E-Value=0) 45 7e-05
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092) 43 2e-04
SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024) 40 0.001
SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_54818| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.042
SB_31262| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.074
SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_7858| Best HMM Match : Gelsolin (HMM E-Value=0.35) 30 1.6
SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 30 2.1
SB_23411| Best HMM Match : Glyco_transf_8 (HMM E-Value=8.4e-15) 30 2.1
SB_31322| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_13852| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 29 3.7
SB_33125| Best HMM Match : Pkinase (HMM E-Value=0) 29 3.7
SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_59005| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_32432| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 28 6.4
SB_1050| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_58364| Best HMM Match : WD40 (HMM E-Value=2.8026e-45) 28 8.5
SB_22056| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)
Length = 1078
Score = 143 bits (347), Expect = 1e-34
Identities = 85/212 (40%), Positives = 121/212 (57%), Gaps = 4/212 (1%)
Frame = +1
Query: 40 AFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNT--TGDKDRLTWDIHFWL 213
A+ +AG + GL+IWRIE F+ + +G FY GDSYI+LNT +D L +D+HFW+
Sbjct: 468 AWKNAGTREGLQIWRIEKFKVKVWSREDYGSFYDGDSYIILNTYKESGEDELKYDVHFWI 527
Query: 214 GSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASG 393
G ++QDE G AA TV L D +QHREVQ +ESK F YF ++ LKGG SG
Sbjct: 528 GKDSTQDEYGTAAYKTVEL-DIHLNDKPIQHREVQGFESKLFKSYFK-SLTILKGGVDSG 585
Query: 394 FSHVTINEGTEKRLFQIKGK--RNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAK 567
F HV E + RL +++G N V++V SL + D FILD ++++VG K
Sbjct: 586 FRHVKPQE-YKPRLLRVRGTTVSNCVVEEVLLARSSLCSEDVFILDKGLNLYLWVGVKCD 644
Query: 568 GVERMKAITVANQIKDQDHNGRADIEVVDSEA 663
E+ + + +IK + NG+ EV D +
Sbjct: 645 KDEKFRGMQEILKIK-SERNGKPKSEVNDESS 675
Score = 73.7 bits (173), Expect = 1e-13
Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 6/191 (3%)
Frame = +1
Query: 106 AVPKTQFGLFYSGDSYIVLNTTGD--KDRLTWDIHFWLGSRTSQDEAGAAAILTVNLDDE 279
+V + +G FY GDSYI+LNT D +D L +D+HFW+G ++QDE G AA TV LD
Sbjct: 879 SVLRDDYGKFYDGDSYIILNTYKDPEEDELKYDVHFWIGKDSTQDEYGTAAYKTVELD-- 936
Query: 280 QFQGSAVQHREVQY----YESKEFLEYFSPAIRYLKGGHASGFSHVTINEGTEKRLFQIK 447
+V+ EV + S + Y KG + F V + ++
Sbjct: 937 -IYPKSVKVEEVPFVRKSLNSDDVFILDKGKTIYQKGDY-DDFEPVLLRVSDASGQMKLT 994
Query: 448 GKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHN 627
+ + + + F+ D F+ D + +FV+ G KA ER A+ + + ++
Sbjct: 995 EMKKGKGRITRNDFD---EKDVFLFDTGNVLFVYSGNKASIDERRLALQIGTNYLNGTNH 1051
Query: 628 GRADIEVVDSE 660
A I + E
Sbjct: 1052 PFASISAIYDE 1062
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 118 bits (285), Expect = 4e-27
Identities = 63/143 (44%), Positives = 89/143 (62%), Gaps = 3/143 (2%)
Frame = +1
Query: 40 AFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDK---DRLTWDIHFW 210
A+ +AG K GL+IWRI F+ PK ++G FY+GDSYI+L T +K ++L +D+HFW
Sbjct: 513 AWKNAGEKVGLQIWRINKFKVEEWPKEKYGQFYAGDSYIILWTYEEKEDTEKLCYDLHFW 572
Query: 211 LGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHAS 390
+G ++QDE G AA TV L D VQHRE+ +ES F YF +I YLKGG +
Sbjct: 573 IGRGSTQDEYGTAAYKTVEL-DTYLNDVPVQHREIMNHESDMFKTYFK-SITYLKGGAET 630
Query: 391 GFSHVTINEGTEKRLFQIKGKRN 459
GF+ V E + R+ ++ G +N
Sbjct: 631 GFNQVKPKE-YKPRILKVSGDKN 652
>SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 68.9 bits (161), Expect = 4e-12
Identities = 63/203 (31%), Positives = 91/203 (44%), Gaps = 16/203 (7%)
Frame = +1
Query: 31 VHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLN--------TTGDKDR 186
V AF AG+KPGLEIWRIE + VA +G FYSGDSYI L+ GD
Sbjct: 3 VDDAFVQAGQKPGLEIWRIEKLKVVAQDPKTYGTFYSGDSYICLSVELHYKSLNKGDVFI 62
Query: 187 LT--WDIHFWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQH----REVQYYESKEFLEY 348
L +I+ W GS+ S+ E + + DE+ G A H + + ESK F +
Sbjct: 63 LDDGLNIYCWNGSQCSRVERMKGIDVAKRIRDEERGGRAQVHIIDECKDKGLESK-FFDA 121
Query: 349 FSPAIRYLKGGHASGFSHVTINEGTEKRLFQIKGKRNVRVKQVKPTFES-LNNGDCFILD 525
+ + + + G+ +R + KP +S L+ DCFILD
Sbjct: 122 LGSRGEIAEDLGTTRSLRKPARAPSLSTMSDASGELEMREIEAKPLKKSNLDTNDCFILD 181
Query: 526 VDHQ-IFVFVGEKAKGVERMKAI 591
+FV+VG+ E+ A+
Sbjct: 182 CGSSGVFVWVGKGCTKNEKSAAM 204
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = +1
Query: 487 FESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRADIEVVDSEAH 666
++SLN GD FILD I+ + G + VERMK I VA +I+D++ GRA + ++D E
Sbjct: 52 YKSLNKGDVFILDDGLNIYCWNGSQCSRVERMKGIDVAKRIRDEERGGRAQVHIID-ECK 110
Query: 667 DGNL 678
D L
Sbjct: 111 DKGL 114
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 57.6 bits (133), Expect = 9e-09
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Frame = +1
Query: 385 ASGFSHVTINEGTEKRLFQIKGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKA 564
AS + + E K + G+RN++ + ++P +S N+GDC++L ++F +VG+ A
Sbjct: 1436 ASALAGLASTEDFTKISLRKTGRRNIQTRLIEPCQKSFNSGDCYVLVTKDELFAWVGKHA 1495
Query: 565 KGVERMKAITVANQI---KDQDHNGRADIEVVDSEAHDGNLR 681
+ER K +A++I ++ D R + V + + NLR
Sbjct: 1496 NAIERAKVTEIASRIFTKRELDCKARDIVFVEEKSQDEDNLR 1537
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 17/89 (19%)
Frame = +1
Query: 67 GLEIWRIENFEPVAVPKTQFGLFYSGDSYIVL---------NTTGDKDRLTWDI------ 201
G+ +W I + +P G F+SG+ Y++ T K R +
Sbjct: 1775 GVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTVAGRVRT 1834
Query: 202 --HFWLGSRTSQDEAGAAAILTVNLDDEQ 282
FW G+ + +E GAAA++ V LD+E+
Sbjct: 1835 AYFFWQGNDCTVNEKGAAAVMAVELDEER 1863
>SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07)
Length = 546
Score = 56.8 bits (131), Expect = 2e-08
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 49 DAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNT-TGDKDRLTWDIHFWLGSRT 225
D GR + +R+ + V G+F+SGDSY+V+ T + + I+FW G+ +
Sbjct: 153 DDGRSKEVGFYRVTDGGKVQCNTAAKGIFFSGDSYLVVYTYRTQRGQKKSIIYFWKGNDS 212
Query: 226 SQDEAGAAAILTVNLDDEQFQGSAVQ 303
E GAAA LTV+LD+ F G AVQ
Sbjct: 213 RVFEKGAAAKLTVDLDNNNFGGDAVQ 238
>SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032)
Length = 675
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +1
Query: 28 EVHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNT 168
E A+ AG++ G+++WRI F+ PK +G FY+GDSYIVLNT
Sbjct: 356 EGEPAWEGAGKEVGVQVWRIVKFKVTHWPKQDYGHFYNGDSYIVLNT 402
>SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12)
Length = 446
Score = 51.6 bits (118), Expect = 6e-07
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = +1
Query: 307 REVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGTEKRLFQIKGKRNVRVKQVKPT 486
RE Q ES+EF E F I Y++GG ASGF V ++ RLF++ + V ++ V P
Sbjct: 284 REEQGDESEEFHELFDNDIAYIEGGTASGFYSVE-DQIYITRLFRLLKDKRVLLEPVLPD 342
Query: 487 FESLNNGDCFILDVDHQIFVFVGEK 561
SL+ FILD +I+++ G K
Sbjct: 343 VSSLDPTFTFILDAGLKIYIWSGAK 367
>SB_14141| Best HMM Match : HH_signal (HMM E-Value=0)
Length = 754
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 133 FYSGDSYIVLNTTGDKDRLTWDI-HFWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHR 309
FY GDSY++L+ DK + H G S DE AA + +DDE F G A Q
Sbjct: 677 FYDGDSYVILDYRKDKTNKKQPVLHILHGKNASTDELFFAATKAIAIDDEYFGGKAKQTV 736
Query: 310 EVQYYESKEF 339
+V E +F
Sbjct: 737 QVCCREKVQF 746
>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
Length = 341
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +1
Query: 187 LTWDIHFWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYF 351
L ++HFW+GS S +E AA V L + +G VQ+RE + YE++EF + F
Sbjct: 19 LLHNLHFWVGSECSAEEYCTAAYKAVEL-FVKLEGKPVQYREAEGYETEEFRKCF 72
>SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024)
Length = 693
Score = 40.3 bits (90), Expect = 0.001
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Frame = +1
Query: 67 GLEIWRIENFEPVAVPKTQFGLFYSGDSYIVL---------NTTGDKDRLTWDI------ 201
G+ +W I + +P G F+SG+ Y++ T K R +
Sbjct: 220 GVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTVAGRVRT 279
Query: 202 --HFWLGSRTSQDEAGAAAILTVNLDDE---QFQGSAVQHREVQYYESKEFLEYFSPAIR 366
FW G+ + +E GAAA++ V LD+E QF G ++ K F
Sbjct: 280 AYFFWQGNDCTVNEKGAAAVMAVELDEERGPQFFGG--------WFSIKRVDVLFDTLTA 331
Query: 367 YLKGGHASGFS-HVTINEGTEKRLFQIKGKRNVR--VKQVKPTFESLNNGDCFILDV--D 531
Y GF+ + + RL+ ++ + QV+ + SL + CF+L + D
Sbjct: 332 Y-------GFNCFFVFSRYSTVRLYVVRNDEPGEGCLVQVRLSGLSLRSRGCFVLLMCRD 384
Query: 532 HQIFVFVGEKAKGVERMKAITVANQIK 612
++FV+ G KA + A+ A I+
Sbjct: 385 GKVFVWYGAKALDDTKKNALVAAKNIQ 411
>SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 205 FWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGH 384
FW G ++ +E GAAA++TV +D E+ +H ++ F Y + + GH
Sbjct: 197 FWQGHDSTVNEKGAAALMTVEIDSEKGPQITFKHTVTVRFDIDTFFIYRECSCFFYCDGH 256
Query: 385 ASG 393
A G
Sbjct: 257 ALG 259
>SB_54818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 35.5 bits (78), Expect = 0.042
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +1
Query: 301 QHREVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGT----EKRLFQIKGKRNVRV 468
Q R VQY E + FL F + L+GG +GF E T KR+F +KG ++
Sbjct: 38 QVRVVQYKEPEHFLRIFRGRLIILEGGKGAGF-RAGCEEDTYDHEGKRMFHVKGTTDLNA 96
Query: 469 KQVK 480
K ++
Sbjct: 97 KAIQ 100
>SB_31262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 34.7 bits (76), Expect = 0.074
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +2
Query: 89 RTSNRSPFRRLSSVSSTPGTPTLY*TPQAIRTV*HGTSISGSARGPARTKPARRPSSR*T 268
R++ RS R + STP TP+ TP I T +S GSARG A+T +
Sbjct: 206 RSTPRSRSRSRARTPSTPSTPSTPSTPSTITTSSRASS-RGSARGGAKTTKTTKKC---- 260
Query: 269 WTTNNSRDQR--YSTERSNITSPRSS*N 346
TT SR Q +T+ IT+ R S N
Sbjct: 261 -TTCKSRGQNGDTTTKTKCITTRRVSGN 287
>SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 31.5 bits (68), Expect = 0.69
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 205 FWLGSRTSQDEAGAAAILTVNLDDEQ 282
FW G ++ +E GAAA++TV +D E+
Sbjct: 37 FWQGHDSTVNEKGAAALMTVEIDSEK 62
>SB_7858| Best HMM Match : Gelsolin (HMM E-Value=0.35)
Length = 103
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 502 NGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRADIEVVDSE 660
N D FI+D+ I+ +VG A E+ KA IKD+ G +++++
Sbjct: 3 NSDVFIVDLGLVIYQWVGCDASPFEKNKAAQYIQVIKDERSGGDIKTHLLENQ 55
>SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 660
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 279 TIPGISGTAPRGPILRVQGVPRIFLTSHPLFKRRTRLRLQPR 404
T+ +SG A L+V+G PRI L S P+F R PR
Sbjct: 252 TVDSVSGMARALVTLKVRGAPRINLDSGPVFAVRGENITLPR 293
>SB_23411| Best HMM Match : Glyco_transf_8 (HMM E-Value=8.4e-15)
Length = 582
Score = 29.9 bits (64), Expect = 2.1
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +2
Query: 239 PARRPSSR*TWTTNNSRDQRYS-TERSNITSPRSS*NISHQPSAI*KADTPQASAT*RSM 415
P+ PSS ++ N RD R S R+N+ +S N+ PS+ D+P AS R
Sbjct: 116 PSSHPSSN-YMSSRNPRDSRNSPASRNNLRESPTSCNVRDSPSSRNPRDSP-ASRNPRDS 173
Query: 416 REQRN--DSSRSRVKETSALSR 475
N DS SR S SR
Sbjct: 174 PSSCNVRDSPSSRNPRDSPASR 195
>SB_31322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 563
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -3
Query: 264 HREDGRRAGFVLAGPRAEPEMDVPC*TVLIACGVQYNVGVPGVEETELSLRNGDRFEVLN 85
HR+ +R F PE D+P T + + V P +E E + N +RFE ++
Sbjct: 130 HRKSAQRGPFHRPRDLLHPEGDIPDNTTSKTSYITHEVSPPKKKEPEKYVPNPNRFETVS 189
>SB_13852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 846
Score = 29.5 bits (63), Expect = 2.8
Identities = 27/101 (26%), Positives = 42/101 (41%)
Frame = +2
Query: 56 AGSRVSKYGGLRTSNRSPFRRLSSVSSTPGTPTLY*TPQAIRTV*HGTSISGSARGPART 235
+G V++ RTS S S S+PGT TP A + + +SG+A
Sbjct: 682 SGQEVTRSHTGRTSRASGESPTSIYVSSPGTNMSESTPSAGQRL-----VSGAAEAALNA 736
Query: 236 KPARRPSSR*TWTTNNSRDQRYSTERSNITSPRSS*NISHQ 358
R +S+ W T + + R +S +SS N S +
Sbjct: 737 LRTGRVTSQAEWETGENSKKNRERSRERKSSGKSSENSSEK 777
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2
Query: 287 RDQRYSTERSNITSPRSS*NISHQPSAI*KADTPQASAT*RSMREQRNDSSRSRVKETSA 466
+D+ T++ +TSPR++ S P A +A +P+ ++ S R RN S +S K +
Sbjct: 312 QDKAIGTDQPEVTSPRATPRAS--PRASPRA-SPRDQSSHSSPRNSRNSSRKSSPKPSPR 368
Query: 467 LSR 475
SR
Sbjct: 369 SSR 371
>SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 937
Score = 29.1 bits (62), Expect = 3.7
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +2
Query: 194 GTSISGSARGPARTKPARRPSSR*TWTTNNSRDQRYSTERSNITSPRSS*NIS-HQPSAI 370
GTS G AR PAR P +P+ T S +T + + P S+ N + PS+
Sbjct: 583 GTSTEGPARPPARPPPTAKPAVNRLSPTRRSLPP-VATHQEDRYRPGSTPNSNIPVPSSR 641
Query: 371 *KADTPQASAT*RS---MREQRNDSSRSRVKETSA 466
A A +T S R+++ D SR ++T++
Sbjct: 642 LGARNMAARSTFHSGERPRDRQRDEGLSRAQDTNS 676
>SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 28.7 bits (61), Expect = 4.9
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 244 AAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYF-SPAIRYLKGGHASG--FSHVTIN 414
AA L + L+ E+FQG+ +R+ +S + +EYF +PA + K S ++
Sbjct: 165 AAQKLQMFLESEEFQGALQLNRDAATTKSSDKVEYFINPAFQLEKTSSTDVKLISFKSLE 224
Query: 415 EGTEKRLFQIKGKRNVRVKQVKP 483
E E+R + + + + KP
Sbjct: 225 EKEERRKLCVPLQATLDKNRFKP 247
>SB_59005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 28.3 bits (60), Expect = 6.4
Identities = 25/76 (32%), Positives = 32/76 (42%)
Frame = +2
Query: 86 LRTSNRSPFRRLSSVSSTPGTPTLY*TPQAIRTV*HGTSISGSARGPARTKPARRPSSR* 265
LR+S P +SV T P +RT S+ SA P+ A RP
Sbjct: 474 LRSSVEGPSSNKTSVEWPSSVRTSSERPLPVRTSAERPSLRTSAERPSLRTSAERPLPVR 533
Query: 266 TWTTNNSRDQRYSTER 313
T +T+ S R STER
Sbjct: 534 T-STDTSSSFRSSTER 548
>SB_32432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 238 AGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSP-AIRYLKGGHASGFSHVTIN 414
AG A +T +L + S + ++ E K + P A + L+GG SH+T
Sbjct: 115 AGCADKITQHLKERLDAVSGILDVALEILEDKALVALQGPKAAQVLQGGVDGDLSHLTFM 174
Query: 415 EGTEKRLFQIKGKRNVR 465
G ++ +K R R
Sbjct: 175 HGVSTSVYGLKDVRVTR 191
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 28.3 bits (60), Expect = 6.4
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +2
Query: 218 RGPARTKPARRPSSR*TWTTNNSRDQRY----STERSNITSPRSS*NISHQPSAI*KADT 385
R + KPARR SS + ++++S Y ST S+ S RSS + S SA +
Sbjct: 999 RKDKKDKPARRQSSSSSSSSSSSGSSSYSSSSSTGSSSSGSSRSSSSSSSGSSASSSSSG 1058
Query: 386 PQASAT*RSMREQRNDSSRSRVKET 460
A+ + ++E + + S+ VKE+
Sbjct: 1059 NDAAKVKKEVKEAKGE-SKEVVKES 1082
>SB_1050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 674
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -1
Query: 281 CSSSKFTVRMAAAPASSWLVLEPSQKWMSHVRRSLSPVVFSTM 153
C F R+ W+ P++ S S+SPV FSTM
Sbjct: 295 CLKKDFIGRIVPLLVDCWIESNPAEMSTSLPSSSISPVAFSTM 337
>SB_58364| Best HMM Match : WD40 (HMM E-Value=2.8026e-45)
Length = 426
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 124 FGLFYSGDSYIVLNTTGDKDRLTWDI 201
+GL +S DS +L +GDK W+I
Sbjct: 209 YGLSWSDDSKFILTASGDKSCKIWNI 234
>SB_22056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 481
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +2
Query: 299 YSTERSNITSPRSS*NISHQP---SAI*KADTPQASAT*RSMREQRNDSSRSRV 451
+S ERSN T+ S+ N SH P SA +D P++SA + ++ S +++V
Sbjct: 46 FSGERSNCTASNSATNASHGPSEMSARAGSDFPKSSAKYPTFDPKKFKSMQAKV 99
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,107,432
Number of Sequences: 59808
Number of extensions: 484324
Number of successful extensions: 1389
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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