Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31373
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 172 2e-43
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 100 1e-21
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 100 1e-21
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transien... 29 2.4
AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical ... 29 2.4
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 29 3.2
Z72518-2|CAA96700.1| 613|Caenorhabditis elegans Hypothetical pr... 28 5.7
U41540-5|AAK39229.2| 666|Caenorhabditis elegans Hypothetical pr... 28 7.5
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 172 bits (419), Expect = 2e-43
Identities = 90/213 (42%), Positives = 121/213 (56%), Gaps = 1/213 (0%)
Frame = +1
Query: 40 AFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHFWLGS 219
A A+ G+K GL +WRI F VP+ G+FY GD+YI L D WD+HFWLG
Sbjct: 9 ALAEIGKKNGLLVWRINKFVLEPVPEVDHGVFYIGDAYIALYQKYDG---CWDVHFWLGK 65
Query: 220 RTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFS 399
S DE G AAI TV +DD G QHRE+Q YES FL YF IRY+ GG+ SG+
Sbjct: 66 NASTDEIGVAAIKTVEIDDS-LGGIPTQHREIQNYESPLFLSYFPDGIRYVSGGYESGYR 124
Query: 400 HVTIN-EGTEKRLFQIKGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVE 576
HV + + LF KGKRNVR +V+ SLN GD FILD+ ++V++ ++ +E
Sbjct: 125 HVDDQFKNWKPHLFHCKGKRNVRCTEVECEVNSLNLGDVFILDLGKDLYVWMPPESGRLE 184
Query: 577 RMKAITVANQIKDQDHNGRADIEVVDSEAHDGN 675
R+K + A I D + G + ++D D +
Sbjct: 185 RIKGMARAKNIADHERMGIPKVHILDDVEWDND 217
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 490 ESLNNGDCFILD-VDHQIFVFVGEKAKGVERMKAITVANQIKDQDH 624
E L+ D FILD ++ IFV++G + ER KA+ Q H
Sbjct: 277 EQLDPKDAFILDAINGGIFVWIGHECTLEERSKALIWGQNYLKQHH 322
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I homolog
protein.
Length = 1257
Score = 100 bits (239), Expect = 1e-21
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 4/203 (1%)
Frame = +1
Query: 49 DAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGD-KDRLTWDIHFWLGSRT 225
D G G+ +W IENF P + + G FY D+Y+VL TT + +L I +WLG
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 226 SQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHA-SGFSH 402
S D+ +A+ V L + + RE E++EFL F I Y++GG SGF +
Sbjct: 563 SLDKGMCSAVHAVGLRN-HLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-Y 620
Query: 403 VTINEGTEKRLFQ--IKGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVE 576
T RL++ + G V ++ V + ESL+ CF+LD I+++ G K++
Sbjct: 621 TTEKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFCFLLDAGETIWIWSGYKSRITV 679
Query: 577 RMKAITVANQIKDQDHNGRADIE 645
KA A ++ +D G+++IE
Sbjct: 680 SNKARLFAERLNKRDRKGKSEIE 702
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 70 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVL 162
+E + +E + V +P+ +FG+FY+ D Y+ L
Sbjct: 903 MESFVLEGKKFVKLPQKEFGIFYTMDCYVFL 933
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 100 bits (239), Expect = 1e-21
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 4/203 (1%)
Frame = +1
Query: 49 DAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGD-KDRLTWDIHFWLGSRT 225
D G G+ +W IENF P + + G FY D+Y+VL TT + +L I +WLG
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 226 SQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHA-SGFSH 402
S D+ +A+ V L + + RE E++EFL F I Y++GG SGF +
Sbjct: 563 SLDKGMCSAVHAVGLRN-HLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-Y 620
Query: 403 VTINEGTEKRLFQ--IKGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVE 576
T RL++ + G V ++ V + ESL+ CF+LD I+++ G K++
Sbjct: 621 TTEKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFCFLLDAGETIWIWSGYKSRITV 679
Query: 577 RMKAITVANQIKDQDHNGRADIE 645
KA A ++ +D G+++IE
Sbjct: 680 SNKARLFAERLNKRDRKGKSEIE 702
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 70 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVL 162
+E + +E + V +P+ +FG+FY+ D Y+ L
Sbjct: 903 MESFVLEGKKFVKLPQKEFGIFYTMDCYVFL 933
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 41.9 bits (94), Expect = 4e-04
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
Frame = +1
Query: 274 DEQFQGSAVQHREVQYY---ESKEFLEYFSPAIRYLKGGHASGFSHVTINEGTEKRLFQI 444
DE+ + AV+ E + E E LE AI ++G S ++ + L Q+
Sbjct: 165 DERIRLDAVKIDEEAFAVVEEEPEKLETQEQAIAAIQGAKQLLKSPTKVSPYPDVMLIQV 224
Query: 445 KGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQ-D 621
+G +NV V+ V P S++ CF++ + + G + +E+ KA + +I + D
Sbjct: 225 RGSKNVDVRLVAPAMSSVHEVACFVVVHQKHLMKYEGLYSNILEKTKASQLCIEILGKSD 284
Query: 622 HNGRADIEVVDSEAHDGNLRQVLRC 696
N A+ V + A L ++L C
Sbjct: 285 LNCTAESIVTVTGASRSTLSKLLFC 309
>AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 2, isoform b
protein.
Length = 886
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -1
Query: 563 AFSPTKTKI*WSTSKMKQSPLFKDSNVGFTCLTRTFLLPLIWKS 432
+F P+ +K+ WS K+K S L K ++ T L T L L KS
Sbjct: 820 SFMPSSSKLSWSNLKVKASRLSKSKSIDTTHLDVTRLHALSKKS 863
>AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical
protein Y55B1BR.1 protein.
Length = 543
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 104 SPFRRLSSVSSTPGTPTLY*TP 169
SP +R SSV + PGTP +Y P
Sbjct: 105 SPRKRFSSVETNPGTPRIYLPP 126
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 29.1 bits (62), Expect = 3.2
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 14/174 (8%)
Frame = +2
Query: 8 ARDLKCLKYTKHSRMPAGSRVSKYGGLRTSNRSPFRRLSSVSSTPG--TPTLY*TPQAIR 181
A ++ K T HS + R + R+ ++SP RR S S G TP + ++
Sbjct: 279 AAEISRRKSTSHSTSLSKRRYLRSRS-RSLSKSPARRRSRHLSRSGSRTPAQRHSRRSES 337
Query: 182 TV*H--GTSISGSARGPARTKPARRPSSR-------*TWTTNNSRDQRYSTERSNIT--- 325
T G +R P R +P RR SR WT SR + + S +T
Sbjct: 338 TSRRRSGRHSRSRSRSPPRKRPVRRSRSRSRSRTPNRNWTRARSRTRSQAKSSSTLTWPL 397
Query: 326 SPRSS*NISHQPSAI*KADTPQASAT*RSMREQRNDSSRSRVKETSALSR*NRH 487
SP S + S++ + K D + + R+ + S + R K + SR RH
Sbjct: 398 SPSRSRSNSNERNLKEKKDRKKKKS--EKKRKHHSKSRKHRSKRSE--SREERH 447
>Z72518-2|CAA96700.1| 613|Caenorhabditis elegans Hypothetical
protein ZC374.2 protein.
Length = 613
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 270 GRRTIPGISGTAPRGPILRVQG--VPRIFLTSHPLFKRRTRLRLQP 401
G +P S AP GPI+ G VP + T++ + +L+ QP
Sbjct: 167 GHHQVPAQSPIAPAGPIVNTPGSLVPPLHFTANIMNPTTVQLKWQP 212
>U41540-5|AAK39229.2| 666|Caenorhabditis elegans Hypothetical
protein F35H12.4 protein.
Length = 666
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 126 RSLLLRGLLHCTEHHRR 176
+SLLLRGL+ +HHRR
Sbjct: 579 KSLLLRGLMAARKHHRR 595
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,729,800
Number of Sequences: 27780
Number of extensions: 356961
Number of successful extensions: 1010
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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