Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31372
         (719 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1350 + 32822711-32823063,32823681-32823803,32823890-328239...    31   1.2  
07_01_1097 - 10068431-10068655,10068797-10068880,10068945-100692...    29   2.8  
04_04_0593 - 26480036-26481438,26481915-26482083                       29   4.9  
03_06_0404 + 33692534-33693607                                         28   8.6  
01_01_0144 - 1316626-1316658,1317580-1318863                           28   8.6  

>04_04_1350 +
           32822711-32823063,32823681-32823803,32823890-32823986,
           32824135-32824170,32824257-32824444,32824688-32824790,
           32824914-32825095,32825184-32825261,32825800-32825902,
           32825983-32826019,32826117-32826511
          Length = 564

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 391 ERMFMKLEPSKITRIHVLPWLRIVYKWCNFCLRD 492
           E  F   +P  I R+  +P L++   WC F LRD
Sbjct: 191 EEAFSLCDPKLIERVDNVPMLQLDIVWCYFVLRD 224


>07_01_1097 -
           10068431-10068655,10068797-10068880,10068945-10069292,
           10069477-10069510,10069617-10070230,10079179-10079553,
           10079599-10079853,10079983-10080300
          Length = 750

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = -1

Query: 599 KCAHLPENVYICRNIYFYRNICMPPLPSRTADKI*SSRKQKLHHLY 462
           KC  +PE   +   I+   ++  P  P R  D+     + K+ H+Y
Sbjct: 270 KCLRVPEEQALLEEIHLSNDLTYPEHPVRILDRAEKRTRSKVWHMY 315


>04_04_0593 - 26480036-26481438,26481915-26482083
          Length = 523

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 571 YTFSGKCAHLLWVISFGVMSIPLTFTAYA 657
           Y FSG   H+ W I  GV  +P  F  +A
Sbjct: 187 YAFSGLSEHINWRIMLGVGILPSVFIGFA 215


>03_06_0404 + 33692534-33693607
          Length = 357

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 8/22 (36%), Positives = 17/22 (77%)
 Frame = -1

Query: 638 SGMDITPNEITQSKCAHLPENV 573
           SG+D+  N++T+ +CA +P ++
Sbjct: 90  SGLDVVTNKVTEEECAGVPHHL 111


>01_01_0144 - 1316626-1316658,1317580-1318863
          Length = 438

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -1

Query: 398 IRSMKITNKYIPSGRWFSKFYLASSVSIYL 309
           + S KI+ K  P+ RWF+  +LAS  S YL
Sbjct: 397 LSSTKISKK--PTFRWFTMTFLASDFSAYL 424


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,357,273
Number of Sequences: 37544
Number of extensions: 374789
Number of successful extensions: 745
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)