Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31372
         (719 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ...    32   0.36 
Z68317-3|CAA92687.1|  599|Caenorhabditis elegans Hypothetical pr...    31   0.63 
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    31   0.83 
Z81147-5|CAB03534.1|  663|Caenorhabditis elegans Hypothetical pr...    30   1.4  
AF016656-4|AAB66039.3|  429|Caenorhabditis elegans Hypothetical ...    29   4.4  
AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical...    29   4.4  

>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
           protein H43E16.1 protein.
          Length = 1203

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 167 CPSYSAQCNTNKYFLDSWIGNQTKNEHFSS 256
           CP+ S+QCNTN + + + I N   N  +S+
Sbjct: 195 CPTQSSQCNTNLFAISTGINNMVWNVDYSN 224


>Z68317-3|CAA92687.1|  599|Caenorhabditis elegans Hypothetical
           protein T01H3.3 protein.
          Length = 599

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +1

Query: 514 RLGSGGMHMLR*K*ILRQMYT--FSGKCAHLLWVISFGVMSIPLTFTAYAPQLILTYDI 684
           ++ +G ++ LR    L   YT  F    A  +W  +FG+ S+   F+ Y P L+ + D+
Sbjct: 357 KIVAGKVNELRSNRALADAYTSLFRSLSAWSIWTSAFGLFSVTAFFSIYLPSLLASPDV 415


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
           protein T19D12.1 protein.
          Length = 1844

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = +2

Query: 167 CPSYSAQCNTNKYFLDSWIGNQTKNEHFSS 256
           CP+ +AQCNTN + + + + N   N+ +++
Sbjct: 52  CPTQTAQCNTNLFSISTQVNNLKWNDDYNN 81


>Z81147-5|CAB03534.1|  663|Caenorhabditis elegans Hypothetical
           protein T09E11.7 protein.
          Length = 663

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +1

Query: 10  YLSFSQTFIGHLC-AIFTASVYLSYIGNIFDSSSLAEP 120
           YL+ S   +  L  ++FTA++ L Y  NIFDS+ L+ P
Sbjct: 347 YLNVSNVNVAILVVSLFTANLILIYKDNIFDSTKLSMP 384


>AF016656-4|AAB66039.3|  429|Caenorhabditis elegans Hypothetical
           protein C35A11.1 protein.
          Length = 429

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = +1

Query: 19  FSQTFIGHLCAIFTASV--YL-SYIGNIFDSSSL 111
           F Q  I  LCAIFT  V  YL  YIG++ D  SL
Sbjct: 302 FPQGIISILCAIFTTDVHRYLYFYIGDVLDLLSL 335


>AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical
           protein C02E7.1 protein.
          Length = 1050

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +1

Query: 502 LSAVRLGSGGMHMLR*K*ILRQMYTFSGKCAHLLWVISFGVMSIPLTFTAYAP 660
           ++A RL S G + L    ++     F  +  +LLW++ FG  ++ L    Y P
Sbjct: 71  VAAERLESDGRNALSPPKVISNWKLFLRQFKNLLWILMFGAAALSLVAYIYDP 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,126,138
Number of Sequences: 27780
Number of extensions: 380655
Number of successful extensions: 980
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)