Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31369
(818 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 50 2e-06
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 50 3e-06
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 50 3e-06
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 48 6e-06
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 48 6e-06
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 46 4e-05
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 46 4e-05
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 41 0.001
AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical ... 36 0.035
U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t prot... 33 0.19
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical pr... 32 0.57
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 31 0.75
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 31 0.75
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.99
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.99
Z83108-6|CAB05512.1| 833|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z50070-13|CAA90402.1| 833|Caenorhabditis elegans Hypothetical p... 31 1.3
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 30 1.7
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 30 1.7
AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical ... 30 1.7
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 30 2.3
Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical p... 29 3.0
Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical pr... 29 3.0
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 29 3.0
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 29 3.0
AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha ... 29 3.0
AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical ... 29 3.0
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 29 4.0
AF025458-4|AAB70975.4| 374|Caenorhabditis elegans Hypothetical ... 29 4.0
Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical p... 29 5.3
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 29 5.3
U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 29 5.3
U42436-3|AAL02471.1| 498|Caenorhabditis elegans Hypothetical pr... 29 5.3
U42436-2|AAL02470.2| 552|Caenorhabditis elegans Hypothetical pr... 29 5.3
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 29 5.3
AL023838-7|CAE47473.1| 357|Caenorhabditis elegans Hypothetical ... 29 5.3
AL023838-6|CAB61038.2| 395|Caenorhabditis elegans Hypothetical ... 29 5.3
AF408761-1|AAO27840.1| 741|Caenorhabditis elegans Rap1GAP protein. 29 5.3
AF061201-1|AAD10194.1| 357|Caenorhabditis elegans RAD51 short i... 29 5.3
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 29 5.3
AF016660-3|AAN84803.1| 376|Caenorhabditis elegans Hypothetical ... 29 5.3
AF016660-2|AAB66048.2| 811|Caenorhabditis elegans Hypothetical ... 29 5.3
AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical ... 29 5.3
AB011382-1|BAA24982.1| 357|Caenorhabditis elegans RecA/Rad51/Dm... 29 5.3
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 28 7.0
AL117195-7|CAB55028.1| 158|Caenorhabditis elegans Hypothetical ... 28 7.0
AC024753-9|AAF60460.1| 139|Caenorhabditis elegans Hypothetical ... 28 7.0
U70851-7|AAB09130.3| 640|Caenorhabditis elegans Hypothetical pr... 28 9.2
U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical p... 28 9.2
U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical pr... 28 9.2
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 28 9.2
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2
Query: 716 KLETEKYDLEERQKRQDYDLKELKERQSSTEAQS 817
KLETEKYDLE+R +RQ+YD+KEL ERQ S
Sbjct: 1065 KLETEKYDLEKRHERQEYDMKELNERQRQVTRNS 1098
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +2
Query: 716 KLETEKYDLEERQKRQDYDLKELKERQ 796
KLE EKYDLE+R++RQDYD+KEL ERQ
Sbjct: 245 KLEAEKYDLEKRRERQDYDMKELHERQ 271
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +2
Query: 716 KLETEKYDLEERQKRQDYDLKELKERQ 796
KLE EKYDLE+R++RQDYD+KEL ERQ
Sbjct: 245 KLEAEKYDLEKRRERQDYDMKELHERQ 271
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +2
Query: 716 KLETEKYDLEERQKRQDYDLKELKERQ 796
KLE EKYDLE+R++RQ+YDLKEL ERQ
Sbjct: 150 KLEGEKYDLEKRRERQEYDLKELNERQ 176
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +2
Query: 716 KLETEKYDLEERQKRQDYDLKELKERQ 796
KLE EKYDLE+R++RQ+YDLKEL ERQ
Sbjct: 254 KLEGEKYDLEKRRERQEYDLKELNERQ 280
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +2
Query: 716 KLETEKYDLEERQKRQDYDLKELKER 793
KLE +KYDLE+R +RQ+YDLKEL ER
Sbjct: 229 KLEAQKYDLEKRHERQEYDLKELNER 254
Score = 45.2 bits (102), Expect = 6e-05
Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 8/179 (4%)
Frame = +3
Query: 186 EGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVSXXXXXXXX 365
EG+ + + + +D +L++Y R +R QA+RK++
Sbjct: 46 EGEKAMLAAKRRHENDEQAKLEDYEKARRSEREKEEEELEKLKEKQAQRKLAREQEEREA 105
Query: 366 XXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKS 545
EEK+++ EE KK Q M+ + G NF IQKK
Sbjct: 106 AERKRLDEERRQKEEQERRARAEEEKKRKEEEKLKKAQ-MMGGGFPGQQGGRNFVIQKKE 164
Query: 546 ENFGLSN-------AQLERNKTKEQLEEEKKISLS-IRIKPLTIEGLSVDKLRQKAQEL 698
E+ G+ + A+ E TKEQ EE K ++++ IR + + ++ K +EL
Sbjct: 165 ESAGVGDRFGNIVQAKQEMGMTKEQQEEAKSVAMAGIRKSIAEASTILPNDMKAKIKEL 223
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +2
Query: 716 KLETEKYDLEERQKRQDYDLKELKER 793
KLE +KYDLE+R +RQ+YDLKEL ER
Sbjct: 229 KLEAQKYDLEKRHERQEYDLKELNER 254
Score = 45.2 bits (102), Expect = 6e-05
Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 8/179 (4%)
Frame = +3
Query: 186 EGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVSXXXXXXXX 365
EG+ + + + +D +L++Y R +R QA+RK++
Sbjct: 46 EGEKAMLAAKRRHENDEQAKLEDYEKARRSEREKEEEELEKLKEKQAQRKLAREQEEREA 105
Query: 366 XXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKS 545
EEK+++ EE KK Q M+ + G NF IQKK
Sbjct: 106 AERKRLDEERRQKEEQERRARAEEEKKRKEEEKLKKAQ-MMGGGFPGQQGGRNFVIQKKE 164
Query: 546 ENFGLSN-------AQLERNKTKEQLEEEKKISLS-IRIKPLTIEGLSVDKLRQKAQEL 698
E+ G+ + A+ E TKEQ EE K ++++ IR + + ++ K +EL
Sbjct: 165 ESAGVGDRFGNIVQAKQEMGMTKEQQEEAKSVAMAGIRKSIAEASTILPNDMKAKIKEL 223
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +2
Query: 716 KLETEKYDLEERQKRQDYDLKEL 784
KLETEKYDLE+R +RQ+YD K+L
Sbjct: 231 KLETEKYDLEKRHERQEYDPKQL 253
>AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical
protein Y92H12A.4 protein.
Length = 782
Score = 35.9 bits (79), Expect = 0.035
Identities = 23/90 (25%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = +3
Query: 432 IEEKRQRLEEAEKKRQAMLQAMKDASKTG-PNFTIQKKSENFGLSNAQLERNKTKEQLEE 608
I K++ +E + + + A+ + T P+F+ +K S + + ++E+ K K+ +EE
Sbjct: 497 IRPKKKSTDEEKAIKSSSEPALSEQKSTEKPSFSTEKLSSD--SATTKIEKEKLKKAIEE 554
Query: 609 EKKISLSIRIKPLTIE-GLSVDKLRQKAQE 695
+++ L++ IK L E G + KL+ + +E
Sbjct: 555 QEEQELNVLIKQLQGEIGTKIAKLKDQWKE 584
>U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t protein
3, isoform c protein.
Length = 279
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 712 VQTRDREIRSRREAKETGLRLKRAQR-KTKQH 804
+QTRDRE+RSR ++ +R +RAQR T H
Sbjct: 239 MQTRDREVRSRETSRTARVRHERAQRASTSSH 270
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 32.3 bits (70), Expect = 0.43
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 438 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLS-NAQLERNKTKEQLEEEK 614
E+R++LEE+E RQA L TI + E + N +LER + LEE+K
Sbjct: 337 ERRRKLEESETARQAELDRQA---------TIYAEQERMAMERNRELERIR----LEEKK 383
Query: 615 KISLSIRIKPLTIEGLSVDKLRQKAQELLGVHRSNSRPRNTI 740
+ + +R + + +E + K+R+ + L R N R R +
Sbjct: 384 RENERVRQEEIAME---ISKIRELERLQLERQRKNERVRQEL 422
>Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical
protein T05D4.5 protein.
Length = 482
Score = 31.9 bits (69), Expect = 0.57
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 429 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLER-NKTKEQLE 605
D EEK+++ E +KK+ A + KDA +K ++ G + + K K+ E
Sbjct: 411 DAEEKKKKDAEEKKKKDAEDEKKKDAGDEKKKDAEDEKKKDAGDEKKKKDAGEKKKKDAE 470
Query: 606 EEKKIS 623
E+KK++
Sbjct: 471 EKKKVA 476
Score = 31.1 bits (67), Expect = 0.99
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +3
Query: 429 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 608
D EEK+++ E EKK+ A + KDA +K + + + + K+ EE
Sbjct: 419 DAEEKKKKDAEDEKKKDAGDEKKKDAEDEKKKDAGDEKKKKDAGEKKKKDAEEKKKVAEE 478
Query: 609 EKK 617
EKK
Sbjct: 479 EKK 481
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 31.5 bits (68), Expect = 0.75
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +3
Query: 432 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQ-KKSENFGLSNAQLERNKTKEQLE- 605
IE+ Q+LEEAEK+ + + +AS + + T+ K+SE L E N E+L+
Sbjct: 648 IEDAVQKLEEAEKRAREL-----EASVSSRDTTVSTKESELSELKGKLTESNSFIEELKV 702
Query: 606 EEKKISLSIRIKPLTIEGLSVDKLRQK 686
+ +K+S I K +E L + +R K
Sbjct: 703 QVEKVSNEISEKQQEVENLMAE-MRDK 728
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 31.5 bits (68), Expect = 0.75
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +3
Query: 432 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQ-KKSENFGLSNAQLERNKTKEQLE- 605
IE+ Q+LEEAEK+ + + +AS + + T+ K+SE L E N E+L+
Sbjct: 650 IEDAVQKLEEAEKRAREL-----EASVSSRDTTVSTKESELSELKGKLTESNSFIEELKV 704
Query: 606 EEKKISLSIRIKPLTIEGLSVDKLRQK 686
+ +K+S I K +E L + +R K
Sbjct: 705 QVEKVSNEISEKQQEVENLMAE-MRDK 730
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 31.5 bits (68), Expect = 0.75
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +3
Query: 432 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 611
+E+K++ +EE EKKR + + A IQ K + Q R++ KE L++
Sbjct: 869 LEDKQKIVEELEKKRDEL--GEEAAKVKARQAEIQSKLDGIFKELVQCHRDEAKESLQKR 926
Query: 612 KKISLSI 632
+K+ I
Sbjct: 927 QKLEKDI 933
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 31.5 bits (68), Expect = 0.75
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +3
Query: 432 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQ-KKSENFGLSNAQLERNKTKEQLE- 605
IE+ Q+LEEAEK+ + + +AS + + T+ K+SE L E N E+L+
Sbjct: 650 IEDAVQKLEEAEKRAREL-----EASVSSRDTTVSTKESELSELKGKLTESNSFIEELKV 704
Query: 606 EEKKISLSIRIKPLTIEGLSVDKLRQK 686
+ +K+S I K +E L + +R K
Sbjct: 705 QVEKVSNEISEKQQEVENLMAE-MRDK 730
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.1 bits (67), Expect = 0.99
Identities = 20/90 (22%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = +3
Query: 438 EKRQRLEEAEKKRQAMLQAMKD---ASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 608
+K +E A+K+++ Q D ASK ++ + ++ A+++ K +++LEE
Sbjct: 13495 KKAAEVEAAKKQKEKDEQLKLDTEAASKKAAAEKLELEKQSHIKKAAEVDAVKKQKELEE 13554
Query: 609 EKKISLSIRIKPLTIEGLSVDKLRQKAQEL 698
++++ K E L +++ ++KA E+
Sbjct: 13555 KQRLESEAATKKADAEKLKLEEQKKKAAEI 13584
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +3
Query: 441 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 614
K+Q +A+K L+A A K +I K + FG E + T EQ EEK
Sbjct: 11626 KKQDENDAKKSVSKNLKA--GAKKDSDTLSITSKKDKFGKRQDSREASATVEQQGEEK 11681
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.1 bits (67), Expect = 0.99
Identities = 20/90 (22%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = +3
Query: 438 EKRQRLEEAEKKRQAMLQAMKD---ASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 608
+K +E A+K+++ Q D ASK ++ + ++ A+++ K +++LEE
Sbjct: 13495 KKAAEVEAAKKQKEKDEQLKLDTEAASKKAAAEKLELEKQSHIKKAAEVDAVKKQKELEE 13554
Query: 609 EKKISLSIRIKPLTIEGLSVDKLRQKAQEL 698
++++ K E L +++ ++KA E+
Sbjct: 13555 KQRLESEAATKKADAEKLKLEEQKKKAAEI 13584
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +3
Query: 441 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 614
K+Q +A+K L+A A K +I K + FG E + T EQ EEK
Sbjct: 11626 KKQDENDAKKSVSKNLKA--GAKKDSDTLSITSKKDKFGKRQDSREASATVEQQGEEK 11681
>Z83108-6|CAB05512.1| 833|Caenorhabditis elegans Hypothetical
protein F43G6.9 protein.
Length = 833
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Frame = +3
Query: 438 EKRQRLEEAEKKRQAMLQAMKDASKTG-PNFTIQKKSENFGLSNAQLER--NKTKEQLEE 608
E+++R++ E K+ + K A+ G P+ + + AQ+E N+TK+ +E
Sbjct: 536 ERQERIDRGEDKKLRQTLSDKFATSLGLPSKSSTHNPRHVLDMKAQVESVDNQTKKLSDE 595
Query: 609 EKKISLS--IRIKPLTIEG-----LSVDKLRQKA 689
E+KI+++ +R L +EG + VD+LR+ +
Sbjct: 596 ERKIAVAKKLRTMLLRLEGALNILMEVDELRRSS 629
>Z50070-13|CAA90402.1| 833|Caenorhabditis elegans Hypothetical
protein F43G6.9 protein.
Length = 833
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Frame = +3
Query: 438 EKRQRLEEAEKKRQAMLQAMKDASKTG-PNFTIQKKSENFGLSNAQLER--NKTKEQLEE 608
E+++R++ E K+ + K A+ G P+ + + AQ+E N+TK+ +E
Sbjct: 536 ERQERIDRGEDKKLRQTLSDKFATSLGLPSKSSTHNPRHVLDMKAQVESVDNQTKKLSDE 595
Query: 609 EKKISLS--IRIKPLTIEG-----LSVDKLRQKA 689
E+KI+++ +R L +EG + VD+LR+ +
Sbjct: 596 ERKIAVAKKLRTMLLRLEGALNILMEVDELRRSS 629
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/69 (30%), Positives = 37/69 (53%)
Frame = +3
Query: 435 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 614
EE+ R++E E+K++ +L+ ++A K + K+E E K K++LEEE+
Sbjct: 531 EEEEARIKEEEEKQRKILE--EEARKKQEEEEARLKAEE---ELKIYEEEKRKKELEEER 585
Query: 615 KISLSIRIK 641
K + IK
Sbjct: 586 KKKEELEIK 594
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 441 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 617
K+Q EEA K + L+ ++ + +KK E + + E K K+ LEEEKK
Sbjct: 554 KKQEEEEARLKAEEELKIYEEEKRKKELEEERKKKEELEIKR-KAEEEKKKKALEEEKK 611
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +3
Query: 435 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 614
E++R+ LEE +K+Q +A A + + +K+ + + E + K + EEEK
Sbjct: 542 EKQRKILEEEARKKQEEEEARLKAEEELKIYEEEKRKKELEEERKKKEELEIKRKAEEEK 601
Query: 615 K 617
K
Sbjct: 602 K 602
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +3
Query: 432 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 611
+EE R+RLE+AE++R + + + E+ S+A+ + N ++ +
Sbjct: 239 LEEARRRLEDAERERSQLQSQLHQVQLELDSVRTALDEESIARSDAEHKLNLANTEITQW 298
Query: 612 K-KISLSIRIKPLTIEGLSVDKLRQKAQ 692
K K + + +E L L+++A+
Sbjct: 299 KSKFDAEVALHHEEVEDLRKKMLQKQAE 326
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +3
Query: 432 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 611
+EE R+RLE+AE++R + + + E+ S+A+ + N ++ +
Sbjct: 239 LEEARRRLEDAERERSQLQSQLHQVQLELDSVRTALDEESIARSDAEHKLNLANTEITQW 298
Query: 612 K-KISLSIRIKPLTIEGLSVDKLRQKAQ 692
K K + + +E L L+++A+
Sbjct: 299 KSKFDAEVALHHEEVEDLRKKMLQKQAE 326
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +3
Query: 432 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 611
+EE R+RLE+AE++R + + + E+ S+A+ + N ++ +
Sbjct: 255 LEEARRRLEDAERERSQLQSQLHQVQLELDSVRTALDEESIARSDAEHKLNLANTEITQW 314
Query: 612 K-KISLSIRIKPLTIEGLSVDKLRQKAQ 692
K K + + +E L L+++A+
Sbjct: 315 KSKFDAEVALHHEEVEDLRKKMLQKQAE 342
>AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical
protein Y6E2A.8 protein.
Length = 444
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Frame = +3
Query: 441 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKS---ENFGLSNAQLERNKT--KEQLE 605
KR+ ++ AEK ++A L+ K++SK+ +KK ++ ++A+ K+ KEQ +
Sbjct: 323 KRETMKRAEKMKEAELKKKKESSKSKEEDKNKKKEVKIKSAPKTSAKKSAKKSAKKEQKK 382
Query: 606 EEKKI 620
EKK+
Sbjct: 383 SEKKV 387
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/87 (20%), Positives = 43/87 (49%)
Frame = +3
Query: 435 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 614
+ +Q+LEE EK+ Q +L+ ++ + Q + +L+R + +Q +E+
Sbjct: 203 QRHKQQLEEYEKRNQEILRREEEIKQQNQEREKQINDDFEKRKQEKLQREEEMKQQNQER 262
Query: 615 KISLSIRIKPLTIEGLSVDKLRQKAQE 695
+ ++ + +E L +KL +K ++
Sbjct: 263 EKLIADDFEKRKLEKLQREKLFEKNKQ 289
>Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical
protein C54D10.12 protein.
Length = 500
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +3
Query: 435 EEKRQRLEEAEKKRQAMLQAMKDAS------KTGPNFTIQKKSENFGLSNAQLERNKTKE 596
EEK Q++ E E+K Q +L K+ + + + I++K E N Q R K E
Sbjct: 208 EEKLQQIREKERKLQELLLRQKEEAEEEALRRLANDSEIEQKLEKIRYENEQQARQKDNE 267
Query: 597 Q 599
Q
Sbjct: 268 Q 268
>Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical
protein F59F5.6 protein.
Length = 1139
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +3
Query: 438 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFT--IQKKSENFGLSNAQLERNKTKEQLEEE 611
+K + L E + Q ++A+ A + + IQ+ N +A+LER +E++ EE
Sbjct: 373 KKAESLPSVEAELQQRMEALTAAEQKSVSAEERIQRLDRNIQELSAELERAVQRERMNEE 432
Query: 612 KKISLSIRIKPLTIEGLSVDKLRQKAQE 695
LS + L E S D+L+ +E
Sbjct: 433 HSQRLSSTVDKLLSE--SNDRLQLHLKE 458
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/62 (20%), Positives = 36/62 (58%)
Frame = +3
Query: 429 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 608
D+E +++LEE+E ++ +LQ+ K + + +++ ++ +++ + K + Q+ E
Sbjct: 1397 DVEHLQKQLEESEVAKERILQSKKKIQQELEDSSMELENVRASHRDSEKRQKKFESQMAE 1456
Query: 609 EK 614
E+
Sbjct: 1457 ER 1458
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/87 (19%), Positives = 43/87 (49%)
Frame = +3
Query: 435 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 614
++KR+++EE EK+R + +++ +K+ + +L++ +++ +EEK
Sbjct: 94 KQKREKMEEREKQRIERERILEEKRLEKDKLAEEKRLDKEKKEKERLDKKLEEDKKKEEK 153
Query: 615 KISLSIRIKPLTIEGLSVDKLRQKAQE 695
+ + K E + D+ R K ++
Sbjct: 154 RKEAEEKKKKDEEEKMKKDEERNKRKK 180
>AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha
homolog SYD-2 protein.
Length = 1139
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +3
Query: 438 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFT--IQKKSENFGLSNAQLERNKTKEQLEEE 611
+K + L E + Q ++A+ A + + IQ+ N +A+LER +E++ EE
Sbjct: 373 KKAESLPSVEAELQQRMEALTAAEQKSVSAEERIQRLDRNIQELSAELERAVQRERMNEE 432
Query: 612 KKISLSIRIKPLTIEGLSVDKLRQKAQE 695
LS + L E S D+L+ +E
Sbjct: 433 HSQRLSSTVDKLLSE--SNDRLQLHLKE 458
>AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical
protein F57B10.6 protein.
Length = 829
Score = 29.5 bits (63), Expect = 3.0
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Frame = +3
Query: 441 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENF------GLSNAQLERNKTKEQL 602
KRQ LE +KRQ +K++ K G + KKS+ GL + L N KE +
Sbjct: 81 KRQVLEARRQKRQNDDDILKNSKKMG-KLKVLKKSQKIREIASGGLDDVAL-ANAIKEVI 138
Query: 603 EEEKKISLSIRIKPLTIEGLSVDK 674
KK+ L+ K + +DK
Sbjct: 139 SPSKKVILNDIYKDIPSTSTYLDK 162
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/68 (23%), Positives = 35/68 (51%)
Frame = +3
Query: 432 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 611
+E+ +L + +Q +++ +T T +++S + +SN QLE + +E LEEE
Sbjct: 1301 LEDAEAQLCALNRIKQQQHSQLEELKRTLDQETRERQSLHSQVSNYQLECEQFRESLEEE 1360
Query: 612 KKISLSIR 635
+ ++
Sbjct: 1361 QDAKTDVQ 1368
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/105 (20%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Frame = +3
Query: 432 IEEKRQRLEEAEKKRQAMLQAMKD-ASKTGPN----FTIQKKSENFGLSNAQLER--NKT 590
+EE ++ E +++ +A+ Q +KD A + G +QK + +L++ ++
Sbjct: 1498 LEESGEQTEAVKRENKALAQELKDIADQLGEGGKSVHDLQKMRRRLEIEKEELQQALDEA 1557
Query: 591 KEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELLGVHRSNSR 725
+ LE E+ + +I+ I +L++K +E +++SR
Sbjct: 1558 ECALEAEEAKVMRAQIEVSQIRSEIEKRLQEKEEEFENTRKNHSR 1602
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +3
Query: 435 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 614
E+K ++ E+ ++K + KD K+G +K+ + + + K +E+ E+EK
Sbjct: 121 EKKEEKKEDEKEKGDDKKEDEKDDKKSGSKDAEKKEEKKEEEKKEEKKEEKKEEKKEDEK 180
Query: 615 K 617
K
Sbjct: 181 K 181
>AF025458-4|AAB70975.4| 374|Caenorhabditis elegans Hypothetical
protein C01B12.2 protein.
Length = 374
Score = 29.1 bits (62), Expect = 4.0
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Frame = +3
Query: 438 EKRQRLEEAEKKRQAMLQAMKDASKTGP----NFTIQKKSENFGLSNAQLERNKTKEQLE 605
E ++R EEAE+K Q A+K +T N TIQ K+ L +E + L
Sbjct: 220 ENQKRQEEAERKLQEKQNAIKCLMETDSVTFWNQTIQSKTSTVVLDRISMELGSLAQNLI 279
Query: 606 EEKKISLSIR--IKPLTIEGLS 665
+ + S I+ L + GLS
Sbjct: 280 SGRDFAASSSKIIQVLQVLGLS 301
>Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical
protein Y57G11C.20 protein.
Length = 649
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 719 LETEKYDLEERQKRQDYDLKELKERQSSTEAQ 814
LE EK++ EE+QK+++ + E KER E Q
Sbjct: 285 LEKEKHEQEEKQKKENLERAE-KERHDHIERQ 315
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/102 (20%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = +3
Query: 432 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 611
+ E +R E + + A Q DA+ Q +NF + ++ +T E +EE
Sbjct: 486 VAENLKRQTEIAESKIAGFQEQIDAAMGAEAMVTQLTDKNFNMEERIMQLEETIEDMEEA 545
Query: 612 KKISLSIRIKPLTIEGLSVDKLRQKAQEL-LGVHRSNSRPRN 734
+ + + ++ V L ++ ++L + +H N R R+
Sbjct: 546 RDLDEQL----AEVQKQQVKDLMKEIEQLKIHIHELNGRIRD 583
>U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical
protein F27C1.6 protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 429 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLER 581
D E+ ++ ++E EK + L S GP T +K+ +NF + + R
Sbjct: 514 DFEDMKEGVKEKEKVKDVDLNLAGWGSWVGPGMTEKKRRQNFVIKAKEKRR 564
>U42436-3|AAL02471.1| 498|Caenorhabditis elegans Hypothetical
protein C49H3.6b protein.
Length = 498
Score = 28.7 bits (61), Expect = 5.3
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Frame = +3
Query: 432 IEEKRQRL----EEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQ 599
I+E++Q L E K Q MLQ D +K GP+ + ++ L +E
Sbjct: 223 IQERKQMLLKMHELRVKAEQIMLQNQNDPTKPGPSSALSERELIEELKKEVTFLRAERES 282
Query: 600 LEEEKKI----SLSIRIKPLTIEGLSVD-KLRQKAQELLGVHRSNSRPRNTI 740
L + +K+ +LS+R T+ G D ++ ++ L G S +P N +
Sbjct: 283 LTKTQKMVKTENLSLR---ETVRGQEADLQMLRRNLTLTGAKMSIDKPGNVL 331
>U42436-2|AAL02470.2| 552|Caenorhabditis elegans Hypothetical
protein C49H3.6a protein.
Length = 552
Score = 28.7 bits (61), Expect = 5.3
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Frame = +3
Query: 432 IEEKRQRL----EEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQ 599
I+E++Q L E K Q MLQ D +K GP+ + ++ L +E
Sbjct: 223 IQERKQMLLKMHELRVKAEQIMLQNQNDPTKPGPSSALSERELIEELKKEVTFLRAERES 282
Query: 600 LEEEKKI----SLSIRIKPLTIEGLSVD-KLRQKAQELLGVHRSNSRPRNTI 740
L + +K+ +LS+R T+ G D ++ ++ L G S +P N +
Sbjct: 283 LTKTQKMVKTENLSLR---ETVRGQEADLQMLRRNLTLTGAKMSIDKPGNVL 331
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/54 (22%), Positives = 31/54 (57%)
Frame = +3
Query: 435 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKE 596
+EK+Q+L+E EK+R+ + Q ++ ++ +E+ +++ ++ K +E
Sbjct: 216 KEKKQKLKEMEKRREKLRQKERELLAVSDKVKKEEPAESSDEEDSRKDQRKPRE 269
>AL023838-7|CAE47473.1| 357|Caenorhabditis elegans Hypothetical
protein Y43C5A.6b protein.
Length = 357
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +3
Query: 435 EEKRQRLEEAEKKR--QAMLQAM--KDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL 602
+ RQ+ + E++ QA+L A +A + NFT+ K E+ G+S+ + + K
Sbjct: 4 QASRQKKSDQEQRAADQALLNAAIEDNAMEQDENFTVIDKLESSGISSGDISKLKEAGYY 63
Query: 603 EEEKKISLSIRIKPLTIEGLSVDKLRQKAQELL 701
E ++ + R + ++G+S K + +E +
Sbjct: 64 TYE-SLAFTTRRELRNVKGISDQKAEKIMKEAM 95
>AL023838-6|CAB61038.2| 395|Caenorhabditis elegans Hypothetical
protein Y43C5A.6a protein.
Length = 395
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +3
Query: 435 EEKRQRLEEAEKKR--QAMLQAM--KDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL 602
+ RQ+ + E++ QA+L A +A + NFT+ K E+ G+S+ + + K
Sbjct: 42 QASRQKKSDQEQRAADQALLNAAIEDNAMEQDENFTVIDKLESSGISSGDISKLKEAGYY 101
Query: 603 EEEKKISLSIRIKPLTIEGLSVDKLRQKAQELL 701
E ++ + R + ++G+S K + +E +
Sbjct: 102 TYE-SLAFTTRRELRNVKGISDQKAEKIMKEAM 133
>AF408761-1|AAO27840.1| 741|Caenorhabditis elegans Rap1GAP protein.
Length = 741
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 635 HQAADHRGSLRRQTPTEGPGTLGSASFKLETEKYDLEERQKRQDYDLKELKERQS 799
H AA+H+ S ++ T L +L+ EK+DL + D+K+LK+RQS
Sbjct: 648 HVAANHQSSDAKRLET-----LCVDVTRLQNEKHDLLRQNVSCKTDIKKLKDRQS 697
>AF061201-1|AAD10194.1| 357|Caenorhabditis elegans RAD51 short
isoform protein.
Length = 357
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +3
Query: 435 EEKRQRLEEAEKKR--QAMLQAM--KDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL 602
+ RQ+ + E++ QA+L A +A + NFT+ K E+ G+S+ + + K
Sbjct: 4 QASRQKKSDQEQRAADQALLNAAIEDNAMEQDENFTVIDKLESSGISSGDISKLKEAGYY 63
Query: 603 EEEKKISLSIRIKPLTIEGLSVDKLRQKAQELL 701
E ++ + R + ++G+S K + +E +
Sbjct: 64 TYE-SLAFTTRRELRNVKGISDQKAEKIMKEAM 95
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 719 LETEKYDLEERQKRQDYDLKELKERQ 796
LE EK +LEE+QK+++ + KER+
Sbjct: 366 LEKEKRELEEKQKKENLERATQKERE 391
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 719 LETEKYDLEERQKRQDYDLKELKERQSSTE 808
LE EK +LEE+QK+++ + E KER+ E
Sbjct: 326 LEKEKRELEEKQKKENLERVE-KERREHIE 354
>AF016660-3|AAN84803.1| 376|Caenorhabditis elegans Hypothetical
protein F53A10.2b protein.
Length = 376
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 635 HQAADHRGSLRRQTPTEGPGTLGSASFKLETEKYDLEERQKRQDYDLKELKERQS 799
H AA+H+ S ++ T L +L+ EK+DL + D+K+LK+RQS
Sbjct: 283 HVAANHQSSDAKRLET-----LCVDVTRLQNEKHDLLRQNVSCKTDIKKLKDRQS 332
>AF016660-2|AAB66048.2| 811|Caenorhabditis elegans Hypothetical
protein F53A10.2c protein.
Length = 811
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 635 HQAADHRGSLRRQTPTEGPGTLGSASFKLETEKYDLEERQKRQDYDLKELKERQS 799
H AA+H+ S ++ T L +L+ EK+DL + D+K+LK+RQS
Sbjct: 718 HVAANHQSSDAKRLET-----LCVDVTRLQNEKHDLLRQNVSCKTDIKKLKDRQS 767
>AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical
protein F53A10.2a protein.
Length = 742
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 635 HQAADHRGSLRRQTPTEGPGTLGSASFKLETEKYDLEERQKRQDYDLKELKERQS 799
H AA+H+ S ++ T L +L+ EK+DL + D+K+LK+RQS
Sbjct: 649 HVAANHQSSDAKRLET-----LCVDVTRLQNEKHDLLRQNVSCKTDIKKLKDRQS 698
>AB011382-1|BAA24982.1| 357|Caenorhabditis elegans
RecA/Rad51/Dmc1-like protein protein.
Length = 357
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +3
Query: 435 EEKRQRLEEAEKKR--QAMLQAM--KDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL 602
+ RQ+ + E++ QA+L A +A + NFT+ K E+ G+S+ + + K
Sbjct: 4 QASRQKKSDQEQRAADQALLNAAIEDNAMEQDENFTVIDKLESSGISSGDISKLKEAGYY 63
Query: 603 EEEKKISLSIRIKPLTIEGLSVDKLRQKAQELL 701
E ++ + R + ++G+S K + +E +
Sbjct: 64 TYE-SLAFTTRRELRNVKGISDQKAEKIMKEAM 95
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/86 (23%), Positives = 39/86 (45%)
Frame = +3
Query: 438 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 617
E+R R+EE E+ + + ++ K ++K+E E K K LEEE +
Sbjct: 422 ERRWRIEEEERLEEIRRKKEEERKKKEEEDEKRRKAEESERVRKLKEEEKRKRVLEEEME 481
Query: 618 ISLSIRIKPLTIEGLSVDKLRQKAQE 695
+ + +E ++R+KA++
Sbjct: 482 MKRKNEEAKIKLEA----EMREKAEQ 503
>AL117195-7|CAB55028.1| 158|Caenorhabditis elegans Hypothetical
protein Y57A10A.9 protein.
Length = 158
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Frame = +3
Query: 438 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFT--------IQKKSENFGLSNAQLERNKTK 593
+K +RL E ++ + Q M++ASK F +QK++ENF + Q + +
Sbjct: 84 QKLRRLAAQELEQDVVEQKMREASKNKVLFANVLNIFADLQKEAENFSKTTKQSSTSPSS 143
Query: 594 EQLEEEKKISLS 629
EE S S
Sbjct: 144 SSSSEESSASSS 155
>AC024753-9|AAF60460.1| 139|Caenorhabditis elegans Hypothetical
protein Y23H5B.2 protein.
Length = 139
Score = 28.3 bits (60), Expect = 7.0
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +3
Query: 441 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKI 620
KRQ+ + +KK ++ A +K+G + KS +Q KEQ E+KK+
Sbjct: 65 KRQQNSKRQKKIKSNSAAPAPPAKSG----VPAKSAEKAKEGSQRSARLKKEQKSEKKKV 120
Query: 621 SLSIRIKPLTIEGLSVDK 674
+ +R E L K
Sbjct: 121 CVDLRSTVYIYEALLFQK 138
>U70851-7|AAB09130.3| 640|Caenorhabditis elegans Hypothetical
protein M02B7.5 protein.
Length = 640
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 208 SVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNAL 312
S+K +G N+STNG N+ RR+S N+L
Sbjct: 594 SMKLSNGSNSSAGSSNSSTNGVNNSSFRRLSFNSL 628
>U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical
protein ZK546.14b protein.
Length = 454
Score = 27.9 bits (59), Expect = 9.2
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +3
Query: 444 RQRLEEAEKKRQAMLQAMKDA--SKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 617
+QR E +K ++A Q K+ S N ++K+ +N + E KE + KK
Sbjct: 266 KQRRAEEKKGKEAAAQVKKETVESTENGNEPVEKQKSGISFNNLKFE---IKEDKQRGKK 322
Query: 618 ISLSIRIKPLTIEGLSVDKLRQKAQE 695
+ + + L + G L K +E
Sbjct: 323 QRTAKKDRALKLTGRDYKSLIAKVEE 348
>U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical
protein ZK546.14a protein.
Length = 472
Score = 27.9 bits (59), Expect = 9.2
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +3
Query: 444 RQRLEEAEKKRQAMLQAMKDA--SKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 617
+QR E +K ++A Q K+ S N ++K+ +N + E KE + KK
Sbjct: 284 KQRRAEEKKGKEAAAQVKKETVESTENGNEPVEKQKSGISFNNLKFE---IKEDKQRGKK 340
Query: 618 ISLSIRIKPLTIEGLSVDKLRQKAQE 695
+ + + L + G L K +E
Sbjct: 341 QRTAKKDRALKLTGRDYKSLIAKVEE 366
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 27.9 bits (59), Expect = 9.2
Identities = 20/86 (23%), Positives = 41/86 (47%)
Frame = +3
Query: 438 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 617
EK++R EEA+K R+ + + Q + E + AQ E + K +LE E++
Sbjct: 325 EKKEREEEAKKNRE------RQEKERQAEVERQAELERQRIIEAQREEEEKKRRLEMERR 378
Query: 618 ISLSIRIKPLTIEGLSVDKLRQKAQE 695
+++ + +E V +++ + E
Sbjct: 379 REEDEKMRKVQMEKAKVKQMQVQMPE 404
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,142,681
Number of Sequences: 27780
Number of extensions: 212227
Number of successful extensions: 1210
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -