Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31366
(523 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 330 3e-91
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 326 7e-90
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 323 5e-89
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 323 5e-89
SB_56| Best HMM Match : Actin (HMM E-Value=0) 322 1e-88
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 1e-47
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 6e-38
SB_54| Best HMM Match : Actin (HMM E-Value=0) 105 2e-23
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 92 2e-19
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 78 5e-15
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 61 5e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 56 1e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 49 3e-06
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.76
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 30 1.0
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 30 1.3
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 29 1.8
SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27) 29 2.3
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 4.1
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 28 5.4
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 28 5.4
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9) 28 5.4
SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 27 7.1
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2) 27 9.4
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 330 bits (812), Expect = 3e-91
Identities = 152/155 (98%), Positives = 154/155 (99%)
Frame = +2
Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 419 TQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
TQIMFETFNSPAMYVAIQAVLSLYA GRTTGIV+D
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMD 155
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 326 bits (801), Expect = 7e-90
Identities = 149/155 (96%), Positives = 153/155 (98%)
Frame = +2
Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 419 TQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
TQIMFETFNSPAMYVAIQAVLSLYA GRTTGIV+D
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMD 155
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 323 bits (794), Expect = 5e-89
Identities = 149/155 (96%), Positives = 153/155 (98%)
Frame = +2
Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 419 TQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
TQIMFETFNSPAMYVAIQAVLSLYA GRTTGIV+D
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMD 155
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 323 bits (794), Expect = 5e-89
Identities = 149/153 (97%), Positives = 152/153 (99%)
Frame = +2
Query: 65 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 244
+DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 245 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 424
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 425 IMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
IMFETFNSPAMYVAIQAVLSLYA GRTTGIV+D
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMD 154
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 322 bits (790), Expect = 1e-88
Identities = 148/153 (96%), Positives = 152/153 (99%)
Frame = +2
Query: 65 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 244
+D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 245 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 424
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 425 IMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
IMFETFNSPAMYVAIQAVLSLYA GRTTGIV+D
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMD 154
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 186 bits (452), Expect = 1e-47
Identities = 84/89 (94%), Positives = 86/89 (96%)
Frame = +2
Query: 65 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 244
DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 245 RGILTLKYPIEHGIITNWDDMEKIWHHTF 331
RGILTLKYPIEHGI+TNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 69.7 bits (163), Expect = 1e-12
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = +2
Query: 404 NREKMTQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
N + M +IMFETFNSPAMYVAIQAVLSLYA GRTTGIV+D
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMD 117
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 153 bits (372), Expect = 6e-38
Identities = 72/152 (47%), Positives = 102/152 (67%), Gaps = 3/152 (1%)
Frame = +2
Query: 77 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 250
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 251 ILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
+L + YP+++GI+ NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 428 MFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
MFE + +Y+AIQAVL+LYA G TG+V+D
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVID 158
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 105 bits (253), Expect = 2e-23
Identities = 48/71 (67%), Positives = 58/71 (81%)
Frame = +2
Query: 311 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 490
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 491 ACGRTTGIVLD 523
A GRTTG V D
Sbjct: 2189 ASGRTTGTVFD 2199
Score = 60.5 bits (140), Expect = 8e-10
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +2
Query: 26 ASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 184
AS T+ F+ V +V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2080 ASVTKQQAAFEQNGGTV--VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 92.3 bits (219), Expect = 2e-19
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +2
Query: 359 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA GRTTG+VLD
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLD 180
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 77.8 bits (183), Expect = 5e-15
Identities = 33/85 (38%), Positives = 56/85 (65%)
Frame = +2
Query: 269 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 448
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 449 PAMYVAIQAVLSLYACGRTTGIVLD 523
PA ++ +VL+ +A GR+ G+V+D
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVID 87
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 61.3 bits (142), Expect = 5e-10
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +2
Query: 425 IMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
IMFE FNSPA+YVAIQAVLSLYA GRTTG+V D
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFD 33
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +2
Query: 83 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 184
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Frame = +2
Query: 20 IPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 199
IP + + ++ FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 683 IPRTKKRRYS-FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Query: 200 --MGQKD-SYVGDEAQSKRGILTL 262
+ KD GD A +K G++ L
Sbjct: 742 DNVNVKDYKKYGDAAVAKSGVMHL 765
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +2
Query: 197 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 376
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 50.8 bits (116), Expect = 7e-07
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = -1
Query: 181 VARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 65
+AR+ DG E+G+G +V+GETGLAH GAI+D + +I+V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 48.8 bits (111), Expect = 3e-06
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Frame = +2
Query: 74 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 253
+A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDY 284
Query: 254 LTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
L Y P + G + NWD ++IW +TF E + M +I
Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDEI 324
Query: 428 MFETFNSPAMYVAIQAVLSLYAC 496
+FE +N A+ A LS Y C
Sbjct: 325 LFEEYNFKALSRTTAAQLSAYKC 347
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 314 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 493
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 494 CGRTTGIV 517
+GIV
Sbjct: 572 YSAVSGIV 579
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 77 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 181
+ +++D GS KAGFA ++A + + S++G H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 32.7 bits (71), Expect = 0.19
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 90 STMAPACARPVSPATTRPAPSSRPSWVALATRA*WSVWARKTPTWVTRP 236
S P+ R TT+P P +PSWV + + W TW RP
Sbjct: 36 SPSKPSDTRIADTTTTKPFPGYQPSWVKVK----YGAWYLNPKTWKARP 80
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.33
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 54 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 158
S C T+L+R T+ APA +P+SPAT P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.58
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 260 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 412
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 0.76
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 401 ANREKMTQIMFETFNSPAMYVAIQAVLSLYACGRTTGIV 517
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 54 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 158
S C T+L+R L +T APA P SPAT P R
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -1
Query: 421 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSL 242
G +L V LG+ GFG V G + + GV+P L+ I + D ++ + +D SL
Sbjct: 157 GGILAVALGILAGFGLAMAV---GTPFISLAGVLPFLILGIGIDDMFIIINEMDRQDNSL 213
Query: 241 AL 236
++
Sbjct: 214 SV 215
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 45 TQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 158
T S C T+L+R T+ APA P SPAT P R
Sbjct: 109 TSLSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 147
>SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27)
Length = 522
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 6 LP*SQYQRPQHKHTQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 158
LP + P T S C +L+R T+ APA P SPAT P R
Sbjct: 397 LPADRRSEPLSAKTIVSSCLAPLLVRPLETIPAPAPTTPTSPATPASGPPIR 448
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 39 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 164
K T ++ ATT + +T PA P +P TT P ++ P+
Sbjct: 63 KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 39 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 164
K T ++ ATT + +T PA P P TT P ++ P+
Sbjct: 133 KPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 174
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 54 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 158
S C T+L+R T+ APA P SPAT P R
Sbjct: 72 SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 186 PWWRGRPTMDGKTARGASSPAKPALHMPEP 97
P W + G T R PAKP+L++P P
Sbjct: 530 PKWLQQVKDGGNTNRRTRIPAKPSLNLPSP 559
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 389 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYACGRTTGIV 517
+ PK ++ ++F F P M +A++ + A G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 54 SRCATTMLLR-L*STMAPACARPVSPAT 134
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 54 SRCATTMLLR-L*STMAPACARPVSPAT 134
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 461
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 54 SRCATTMLLR-L*STMAPACARPVSPAT 134
S C T+L+R L +T APA P SPAT
Sbjct: 14 SSCLATLLVRPLETTPAPAPTTPTSPAT 41
>SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = -2
Query: 480 STAWMATYMAGELKVSNMIWV---IFSLLALGL 391
S AW+ + + EL+ S +WV IFS+L +G+
Sbjct: 163 SVAWLCSLLYLELEASLYVWVPSLIFSILIIGV 195
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 56 KMCDDDVAALVVDNG-SGMCKAGFAGD 133
++CD D + +N MCKAG+ GD
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 180 WRGRPTMDGKTARGASSPAKPALHMPEP 97
W + G T R PAKPAL++P P
Sbjct: 72 WLQQVKDGGNTNRRTRIPAKPALNLPSP 99
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 156 GKTARGASSPAKPALHMPEP 97
G T R PAKPAL++P P
Sbjct: 80 GNTNRRTRIPAKPALNLPSP 99
>SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2)
Length = 782
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 54 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 158
S C T+++R T+ APA P SPAT P R
Sbjct: 51 SSCLATLVVRPLETIPAPAPTTPTSPATPASGPPIR 86
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 54 SRCATTMLLR-L*STMAPACARPVSPAT 134
S C T L+R L +T APA P SPAT
Sbjct: 523 SSCLATFLVRTLETTPAPAPTTPTSPAT 550
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,195,676
Number of Sequences: 59808
Number of extensions: 346618
Number of successful extensions: 1242
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -