BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV31366 (523 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 330 4e-91 X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 328 1e-90 Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 328 1e-90 Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 328 1e-90 X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 328 1e-90 X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 328 1e-90 X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 328 1e-90 U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 328 1e-90 Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 315 1e-86 U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 289 8e-79 U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 235 2e-62 AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 197 5e-51 J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 188 2e-48 J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 6e-48 J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 6e-48 J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 182 1e-46 Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 155 2e-38 AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 124 4e-29 AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 96 2e-20 Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 50 1e-06 U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 50 1e-06 U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 38 0.004 Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.38 AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 1.2 AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 1.5 AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 4.7 AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 4.7 Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 27 6.2 Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 27 6.2 U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 27 6.2 U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 27 6.2 U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 27 6.2 Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 27 8.1 Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 27 8.1 Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical pr... 27 8.1 >Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical protein T04C12.5 protein. Length = 376 Score = 330 bits (811), Expect = 4e-91 Identities = 152/155 (98%), Positives = 154/155 (99%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 419 TQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523 TQIMFETFN+PAMYVAIQAVLSLYA GRTTGIVLD Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 155 >X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. Length = 376 Score = 328 bits (807), Expect = 1e-90 Identities = 150/155 (96%), Positives = 154/155 (99%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 419 TQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523 TQIMFETFN+PAMYVAIQAVLSLYA GRTTGIVLD Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 155 >Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical protein T04C12.6 protein. Length = 376 Score = 328 bits (806), Expect = 1e-90 Identities = 150/155 (96%), Positives = 154/155 (99%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 419 TQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523 TQIMFETFN+PAMYVAIQAVLSLYA GRTTG+VLD Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155 >Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical protein T04C12.4 protein. Length = 376 Score = 328 bits (806), Expect = 1e-90 Identities = 150/155 (96%), Positives = 154/155 (99%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 419 TQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523 TQIMFETFN+PAMYVAIQAVLSLYA GRTTG+VLD Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155 >X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. Length = 376 Score = 328 bits (806), Expect = 1e-90 Identities = 150/155 (96%), Positives = 154/155 (99%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 419 TQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523 TQIMFETFN+PAMYVAIQAVLSLYA GRTTG+VLD Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155 >X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. Length = 375 Score = 328 bits (806), Expect = 1e-90 Identities = 150/155 (96%), Positives = 154/155 (99%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 419 TQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523 TQIMFETFN+PAMYVAIQAVLSLYA GRTTG+VLD Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155 >X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. Length = 376 Score = 328 bits (806), Expect = 1e-90 Identities = 150/155 (96%), Positives = 154/155 (99%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 419 TQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523 TQIMFETFN+PAMYVAIQAVLSLYA GRTTG+VLD Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155 >U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4, isoform a protein. Length = 376 Score = 328 bits (806), Expect = 1e-90 Identities = 150/155 (96%), Positives = 154/155 (99%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 419 TQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523 TQIMFETFN+PAMYVAIQAVLSLYA GRTTG+VLD Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155 >Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical protein T25C8.2 protein. Length = 375 Score = 315 bits (774), Expect = 1e-86 Identities = 143/153 (93%), Positives = 151/153 (98%) Frame = +2 Query: 65 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 244 ++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Query: 245 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 424 RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121 Query: 425 IMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523 IMFETFN+PAMYV IQAVLSLYA GRTTGIVLD Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLD 154 >U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4, isoform c protein. Length = 362 Score = 289 bits (709), Expect = 8e-79 Identities = 132/137 (96%), Positives = 136/137 (99%) Frame = +2 Query: 113 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 292 +AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+T Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64 Query: 293 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 472 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124 Query: 473 AVLSLYACGRTTGIVLD 523 AVLSLYA GRTTG+VLD Sbjct: 125 AVLSLYASGRTTGVVLD 141 >U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4, isoform b protein. Length = 332 Score = 235 bits (574), Expect = 2e-62 Identities = 107/111 (96%), Positives = 110/111 (99%) Frame = +2 Query: 191 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 370 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60 Query: 371 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523 LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA GRTTG+VLD Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 111 >AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical protein Y53F4B.22 protein. Length = 374 Score = 197 bits (480), Expect = 5e-51 Identities = 89/157 (56%), Positives = 119/157 (75%), Gaps = 4/157 (2%) Frame = +2 Query: 65 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 235 D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61 Query: 236 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 412 +S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRE 121 Query: 413 KMTQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523 + +I FETFN PA+Y+ +QAVLSLYA GRTTG+VLD Sbjct: 122 RSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLD 158 >J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.elegans (nematode)actin gene IV, 5' end. ). Length = 86 Score = 188 bits (458), Expect = 2e-48 Identities = 85/86 (98%), Positives = 86/86 (100%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKI 316 SKRGILTLKYPIEHGI+TNWDDMEKI Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86 >J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.elegans (nematode)actin gene III, 5' end. ). Length = 86 Score = 186 bits (454), Expect = 6e-48 Identities = 84/86 (97%), Positives = 86/86 (100%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKI 316 SKRGILTLKYPIEHGI+TNWDDMEKI Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86 >J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.elegans (nematode)actin gene I, 5' end. ). Length = 86 Score = 186 bits (454), Expect = 6e-48 Identities = 84/86 (97%), Positives = 86/86 (100%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKI 316 SKRGILTLKYPIEHGI+TNWDDMEKI Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86 >J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.elegans (nematode)actin gene II, 5' end. ). Length = 83 Score = 182 bits (444), Expect = 1e-46 Identities = 82/83 (98%), Positives = 83/83 (100%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDM 307 SKRGILTLKYPIEHGI+TNWDDM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83 >Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical protein K07C5.1 protein. Length = 395 Score = 155 bits (376), Expect = 2e-38 Identities = 76/150 (50%), Positives = 104/150 (69%), Gaps = 3/150 (2%) Frame = +2 Query: 83 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 256 +VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68 Query: 257 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 433 + YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128 Query: 434 ETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523 E + ++YVA+QAVL+LYA G TG+V+D Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVD 158 >AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex component protein 1 protein. Length = 425 Score = 124 bits (299), Expect = 4e-29 Identities = 67/158 (42%), Positives = 89/158 (56%), Gaps = 13/158 (8%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 202 M + A V+DNG+G K G+AG+ P+ + PS V Q V G+ Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60 Query: 203 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 379 D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H LLT Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120 Query: 380 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 493 E PLN NRE +IMFE+FN P +Y+A+QAVL+L A Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTA 158 >AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical protein ZK616.4 protein. Length = 436 Score = 95.9 bits (228), Expect = 2e-20 Identities = 61/169 (36%), Positives = 90/169 (53%), Gaps = 17/169 (10%) Frame = +2 Query: 68 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 241 D+V+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+ Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68 Query: 242 KR------GILTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 376 KR G + P ++ G+I +W+ EKI H++ N L P EHPVL Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128 Query: 377 TEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523 +E+ N +A REK+T+IMFE F PA Y++ VLS +A GRT G+++D Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVD 177 >Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical protein C08B11.6 protein. Length = 418 Score = 49.6 bits (113), Expect = 1e-06 Identities = 33/123 (26%), Positives = 58/123 (47%) Frame = +2 Query: 74 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 253 + ++ DNG K G ++PR V SIV + +H+ V + + +E K + Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57 Query: 254 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 433 ++ PIE G + NWD ++IW TF + V + LT+ A + ++I+F Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115 Query: 434 ETF 442 + F Sbjct: 116 DYF 118 >U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related protein-like protein. Length = 418 Score = 49.6 bits (113), Expect = 1e-06 Identities = 33/123 (26%), Positives = 58/123 (47%) Frame = +2 Query: 74 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 253 + ++ DNG K G ++PR V SIV + +H+ V + + +E K + Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57 Query: 254 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 433 ++ PIE G + NWD ++IW TF + V + LT+ A + ++I+F Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115 Query: 434 ETF 442 + F Sbjct: 116 DYF 118 >U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical protein F42C5.9 protein. Length = 552 Score = 37.9 bits (84), Expect = 0.004 Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 2/149 (1%) Frame = +2 Query: 83 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 256 L+++ GS +AG + P++ FP+I R + VG + R I Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240 Query: 257 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 436 +E I D+ K EL+V P ++ VLL+ P ++ QI E Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298 Query: 437 TFNSPAMYVAIQAVLSLYACGRTTGIVLD 523 + + Q L LYA TTG+V+D Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVD 327 >Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical protein T10B10.1 protein. Length = 428 Score = 31.5 bits (68), Expect = 0.38 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +3 Query: 90 STMAPACARPVSPATTRPAPSSRP 161 +T AP PATTRPAP+S+P Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340 >AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical protein T08D2.8 protein. Length = 388 Score = 29.9 bits (64), Expect = 1.2 Identities = 18/36 (50%), Positives = 20/36 (55%) Frame = +3 Query: 81 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRA 188 RL S +AP A P S A TR APS + VA RA Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266 >AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical protein F59E12.1 protein. Length = 811 Score = 29.5 bits (63), Expect = 1.5 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = -2 Query: 204 PIPTITPWWRGRPTMDGKTARGASSPAKPALHMPEPL 94 P T TP RGRP + ++ P P P+PL Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372 >AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical protein C08F1.11 protein. Length = 279 Score = 27.9 bits (59), Expect = 4.7 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +2 Query: 113 KAGFAGDDAPRAVFPSIVGRPRHQG 187 KA + G D P+A F I+G ++G Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68 >AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical protein F54A3.1 protein. Length = 425 Score = 27.9 bits (59), Expect = 4.7 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +3 Query: 90 STMAPACARPVSPATTRPAPSSRPSWVALATRA 188 S +AP A P S A TR APS + VA RA Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270 >Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen protein. Length = 1759 Score = 27.5 bits (58), Expect = 6.2 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = -3 Query: 254 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 171 GY GP P + GP P PG EG Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414 >Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen protein. Length = 1758 Score = 27.5 bits (58), Expect = 6.2 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = -3 Query: 254 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 171 GY GP P + GP P PG EG Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413 >U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2, isoform a protein. Length = 1758 Score = 27.5 bits (58), Expect = 6.2 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = -3 Query: 254 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 171 GY GP P + GP P PG EG Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413 >U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2, isoform b protein. Length = 1759 Score = 27.5 bits (58), Expect = 6.2 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = -3 Query: 254 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 171 GY GP P + GP P PG EG Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414 >U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen protein. Length = 1795 Score = 27.5 bits (58), Expect = 6.2 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = -3 Query: 254 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 171 GY GP P + GP P PG EG Sbjct: 423 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 450 >Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical protein F29G6.3c protein. Length = 1453 Score = 27.1 bits (57), Expect = 8.1 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Frame = -1 Query: 358 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 191 L G Q +V +VP +H+ +D++ L S+A+G V +H GV + H H Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269 >Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein F29G6.3b protein. Length = 1785 Score = 27.1 bits (57), Expect = 8.1 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Frame = -1 Query: 358 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 191 L G Q +V +VP +H+ +D++ L S+A+G V +H GV + H H Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269 >Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical protein F29G6.3a protein. Length = 772 Score = 27.1 bits (57), Expect = 8.1 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Frame = -1 Query: 358 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 191 L G Q +V +VP +H+ +D++ L S+A+G V +H GV + H H Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,356,318 Number of Sequences: 27780 Number of extensions: 246093 Number of successful extensions: 1177 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 987 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1171 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1017709248 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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