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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31366
         (523 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81584-5|CAB04675.1|  376|Caenorhabditis elegans Hypothetical pr...   330   4e-91
X16797-1|CAA34718.1|  376|Caenorhabditis elegans actin protein.       328   1e-90
Z81584-6|CAB04678.1|  376|Caenorhabditis elegans Hypothetical pr...   328   1e-90
Z81584-4|CAB04676.1|  376|Caenorhabditis elegans Hypothetical pr...   328   1e-90
X16799-1|CAA34720.1|  376|Caenorhabditis elegans actin protein.       328   1e-90
X16798-1|CAA34719.1|  375|Caenorhabditis elegans actin protein.       328   1e-90
X16796-1|CAA34717.1|  376|Caenorhabditis elegans actin protein.       328   1e-90
U64601-5|AAB04575.1|  376|Caenorhabditis elegans Actin protein 4...   328   1e-90
Z83241-1|CAB05817.1|  375|Caenorhabditis elegans Hypothetical pr...   315   1e-86
U64601-6|AAT92068.1|  362|Caenorhabditis elegans Actin protein 4...   289   8e-79
U64601-7|AAK77622.1|  332|Caenorhabditis elegans Actin protein 4...   235   2e-62
AL132949-19|CAB70110.2|  374|Caenorhabditis elegans Hypothetical...   197   5e-51
J01046-1|AAA27890.1|   86|Caenorhabditis elegans protein ( C.ele...   188   2e-48
J01044-1|AAA27889.1|   86|Caenorhabditis elegans protein ( C.ele...   186   6e-48
J01042-1|AAA27887.1|   86|Caenorhabditis elegans protein ( C.ele...   186   6e-48
J01043-1|AAA27888.1|   83|Caenorhabditis elegans protein ( C.ele...   182   1e-46
Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical pr...   155   2e-38
AC024200-9|AAF36012.1|  425|Caenorhabditis elegans Arp2/3 comple...   124   4e-29
AC006833-3|AAF60947.2|  436|Caenorhabditis elegans Hypothetical ...    96   2e-20
Z46676-5|CAA86667.3|  418|Caenorhabditis elegans Hypothetical pr...    50   1e-06
U24189-2|AAC47513.1|  418|Caenorhabditis elegans actin-related p...    50   1e-06
U40799-8|AAA81487.1|  552|Caenorhabditis elegans Hypothetical pr...    38   0.004
Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical pr...    31   0.38 
AC199170-9|ABO33267.1|  388|Caenorhabditis elegans Hypothetical ...    30   1.2  
AF003386-14|AAK82896.1|  811|Caenorhabditis elegans Hypothetical...    29   1.5  
AF025453-5|AAY55851.1|  279|Caenorhabditis elegans Hypothetical ...    28   4.7  
AC024136-6|AAF35965.3|  425|Caenorhabditis elegans Hypothetical ...    28   4.7  
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen...    27   6.2  
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen...    27   6.2  
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ...    27   6.2  
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ...    27   6.2  
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll...    27   6.2  
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z78543-3|CAB01755.2|  772|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z81584-5|CAB04675.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.5 protein.
          Length = 376

 Score =  330 bits (811), Expect = 4e-91
 Identities = 152/155 (98%), Positives = 154/155 (99%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 419 TQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
           TQIMFETFN+PAMYVAIQAVLSLYA GRTTGIVLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 155


>X16797-1|CAA34718.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  328 bits (807), Expect = 1e-90
 Identities = 150/155 (96%), Positives = 154/155 (99%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 419 TQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
           TQIMFETFN+PAMYVAIQAVLSLYA GRTTGIVLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 155


>Z81584-6|CAB04678.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.6 protein.
          Length = 376

 Score =  328 bits (806), Expect = 1e-90
 Identities = 150/155 (96%), Positives = 154/155 (99%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 419 TQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
           TQIMFETFN+PAMYVAIQAVLSLYA GRTTG+VLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155


>Z81584-4|CAB04676.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.4 protein.
          Length = 376

 Score =  328 bits (806), Expect = 1e-90
 Identities = 150/155 (96%), Positives = 154/155 (99%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 419 TQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
           TQIMFETFN+PAMYVAIQAVLSLYA GRTTG+VLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155


>X16799-1|CAA34720.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  328 bits (806), Expect = 1e-90
 Identities = 150/155 (96%), Positives = 154/155 (99%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 419 TQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
           TQIMFETFN+PAMYVAIQAVLSLYA GRTTG+VLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155


>X16798-1|CAA34719.1|  375|Caenorhabditis elegans actin protein.
          Length = 375

 Score =  328 bits (806), Expect = 1e-90
 Identities = 150/155 (96%), Positives = 154/155 (99%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 419 TQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
           TQIMFETFN+PAMYVAIQAVLSLYA GRTTG+VLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155


>X16796-1|CAA34717.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  328 bits (806), Expect = 1e-90
 Identities = 150/155 (96%), Positives = 154/155 (99%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 419 TQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
           TQIMFETFN+PAMYVAIQAVLSLYA GRTTG+VLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155


>U64601-5|AAB04575.1|  376|Caenorhabditis elegans Actin protein 4,
           isoform a protein.
          Length = 376

 Score =  328 bits (806), Expect = 1e-90
 Identities = 150/155 (96%), Positives = 154/155 (99%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 419 TQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
           TQIMFETFN+PAMYVAIQAVLSLYA GRTTG+VLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155


>Z83241-1|CAB05817.1|  375|Caenorhabditis elegans Hypothetical
           protein T25C8.2 protein.
          Length = 375

 Score =  315 bits (774), Expect = 1e-86
 Identities = 143/153 (93%), Positives = 151/153 (98%)
 Frame = +2

Query: 65  DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 244
           ++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 245 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 424
           RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 62  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121

Query: 425 IMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
           IMFETFN+PAMYV IQAVLSLYA GRTTGIVLD
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLD 154


>U64601-6|AAT92068.1|  362|Caenorhabditis elegans Actin protein 4,
           isoform c protein.
          Length = 362

 Score =  289 bits (709), Expect = 8e-79
 Identities = 132/137 (96%), Positives = 136/137 (99%)
 Frame = +2

Query: 113 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 292
           +AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+T
Sbjct: 5   RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64

Query: 293 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 472
           NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 65  NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124

Query: 473 AVLSLYACGRTTGIVLD 523
           AVLSLYA GRTTG+VLD
Sbjct: 125 AVLSLYASGRTTGVVLD 141


>U64601-7|AAK77622.1|  332|Caenorhabditis elegans Actin protein 4,
           isoform b protein.
          Length = 332

 Score =  235 bits (574), Expect = 2e-62
 Identities = 107/111 (96%), Positives = 110/111 (99%)
 Frame = +2

Query: 191 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 370
           MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1   MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60

Query: 371 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
           LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA GRTTG+VLD
Sbjct: 61  LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 111


>AL132949-19|CAB70110.2|  374|Caenorhabditis elegans Hypothetical
           protein Y53F4B.22 protein.
          Length = 374

 Score =  197 bits (480), Expect = 5e-51
 Identities = 89/157 (56%), Positives = 119/157 (75%), Gaps = 4/157 (2%)
 Frame = +2

Query: 65  DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 235
           D DV A   +V+DNGSG+ KAGFAG+  P+  F + VGRP++  VM G    D ++G +A
Sbjct: 2   DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61

Query: 236 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 412
           +S RG+ +++YP+EHGI+ NW DMEKIW + F  ++L++ PEEHPVLLT+APLNP  NRE
Sbjct: 62  ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRE 121

Query: 413 KMTQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
           +  +I FETFN PA+Y+ +QAVLSLYA GRTTG+VLD
Sbjct: 122 RSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLD 158


>J01046-1|AAA27890.1|   86|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene IV, 5' end. ).
          Length = 86

 Score =  188 bits (458), Expect = 2e-48
 Identities = 85/86 (98%), Positives = 86/86 (100%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKI 316
           SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKI 86


>J01044-1|AAA27889.1|   86|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene III, 5' end. ).
          Length = 86

 Score =  186 bits (454), Expect = 6e-48
 Identities = 84/86 (97%), Positives = 86/86 (100%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKI 316
           SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKI 86


>J01042-1|AAA27887.1|   86|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene I, 5' end. ).
          Length = 86

 Score =  186 bits (454), Expect = 6e-48
 Identities = 84/86 (97%), Positives = 86/86 (100%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKI 316
           SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKI 86


>J01043-1|AAA27888.1|   83|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene II, 5' end. ).
          Length = 83

 Score =  182 bits (444), Expect = 1e-46
 Identities = 82/83 (98%), Positives = 83/83 (100%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDM 307
           SKRGILTLKYPIEHGI+TNWDDM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDM 83


>Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical
           protein K07C5.1 protein.
          Length = 395

 Score =  155 bits (376), Expect = 2e-38
 Identities = 76/150 (50%), Positives = 104/150 (69%), Gaps = 3/150 (2%)
 Frame = +2

Query: 83  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 256
           +VVDNG+G  K G+AG + P  +FPS+VGRP  +    VG  + KD  VG+E    R +L
Sbjct: 9   IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68

Query: 257 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 433
            + YP+++GI+ NWDDM  +W HTF  E L + P+E  +LLTE PLNP +NREKM Q+MF
Sbjct: 69  DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128

Query: 434 ETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
           E +   ++YVA+QAVL+LYA G  TG+V+D
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVD 158


>AC024200-9|AAF36012.1|  425|Caenorhabditis elegans Arp2/3 complex
           component protein 1 protein.
          Length = 425

 Score =  124 bits (299), Expect = 4e-29
 Identities = 67/158 (42%), Positives = 89/158 (56%), Gaps = 13/158 (8%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 202
           M    + A V+DNG+G  K G+AG+  P+ + PS       V     Q       V  G+
Sbjct: 1   MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60

Query: 203 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 379
              D ++GDEA S      T+KYPI HGI+ +WD ME+ W    +  LR  PE+H  LLT
Sbjct: 61  DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120

Query: 380 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 493
           E PLN   NRE   +IMFE+FN P +Y+A+QAVL+L A
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTA 158


>AC006833-3|AAF60947.2|  436|Caenorhabditis elegans Hypothetical
           protein ZK616.4 protein.
          Length = 436

 Score = 95.9 bits (228), Expect = 2e-20
 Identities = 61/169 (36%), Positives = 90/169 (53%), Gaps = 17/169 (10%)
 Frame = +2

Query: 68  DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 241
           D+V+ LV D GS   + GFAG++ P+   PS +             Q+    GD +  Q+
Sbjct: 9   DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68

Query: 242 KR------GILTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 376
           KR      G   +  P         ++ G+I +W+  EKI  H++ N L   P EHPVL 
Sbjct: 69  KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128

Query: 377 TEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
           +E+  N +A REK+T+IMFE F  PA Y++   VLS +A GRT G+++D
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVD 177


>Z46676-5|CAA86667.3|  418|Caenorhabditis elegans Hypothetical
           protein C08B11.6 protein.
          Length = 418

 Score = 49.6 bits (113), Expect = 1e-06
 Identities = 33/123 (26%), Positives = 58/123 (47%)
 Frame = +2

Query: 74  VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 253
           +  ++ DNG    K G    ++PR V  SIV + +H+   V +  +     +E   K  +
Sbjct: 3   LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57

Query: 254 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 433
             ++ PIE G + NWD  ++IW  TF   + V      + LT+      A  +  ++I+F
Sbjct: 58  FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115

Query: 434 ETF 442
           + F
Sbjct: 116 DYF 118


>U24189-2|AAC47513.1|  418|Caenorhabditis elegans actin-related
           protein-like protein.
          Length = 418

 Score = 49.6 bits (113), Expect = 1e-06
 Identities = 33/123 (26%), Positives = 58/123 (47%)
 Frame = +2

Query: 74  VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 253
           +  ++ DNG    K G    ++PR V  SIV + +H+   V +  +     +E   K  +
Sbjct: 3   LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57

Query: 254 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 433
             ++ PIE G + NWD  ++IW  TF   + V      + LT+      A  +  ++I+F
Sbjct: 58  FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115

Query: 434 ETF 442
           + F
Sbjct: 116 DYF 118


>U40799-8|AAA81487.1|  552|Caenorhabditis elegans Hypothetical
           protein F42C5.9 protein.
          Length = 552

 Score = 37.9 bits (84), Expect = 0.004
 Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 2/149 (1%)
 Frame = +2

Query: 83  LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 256
           L+++ GS   +AG    +   P++ FP+I  R     + VG       +       R I 
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240

Query: 257 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 436
                +E   I    D+ K        EL+V P ++ VLL+     P     ++ QI  E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298

Query: 437 TFNSPAMYVAIQAVLSLYACGRTTGIVLD 523
                +  +  Q  L LYA   TTG+V+D
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVD 327


>Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical
           protein T10B10.1 protein.
          Length = 428

 Score = 31.5 bits (68), Expect = 0.38
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 90  STMAPACARPVSPATTRPAPSSRP 161
           +T AP       PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340


>AC199170-9|ABO33267.1|  388|Caenorhabditis elegans Hypothetical
           protein T08D2.8 protein.
          Length = 388

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 18/36 (50%), Positives = 20/36 (55%)
 Frame = +3

Query: 81  RL*STMAPACARPVSPATTRPAPSSRPSWVALATRA 188
           RL S +AP  A P S A TR APS +   VA   RA
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266


>AF003386-14|AAK82896.1|  811|Caenorhabditis elegans Hypothetical
           protein F59E12.1 protein.
          Length = 811

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 204 PIPTITPWWRGRPTMDGKTARGASSPAKPALHMPEPL 94
           P  T TP  RGRP +    ++    P  P    P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372


>AF025453-5|AAY55851.1|  279|Caenorhabditis elegans Hypothetical
           protein C08F1.11 protein.
          Length = 279

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 113 KAGFAGDDAPRAVFPSIVGRPRHQG 187
           KA + G D P+A F  I+G   ++G
Sbjct: 44  KASYLGHDTPQATFREIIGNKEYRG 68


>AC024136-6|AAF35965.3|  425|Caenorhabditis elegans Hypothetical
           protein F54A3.1 protein.
          Length = 425

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +3

Query: 90  STMAPACARPVSPATTRPAPSSRPSWVALATRA 188
           S +AP  A P S A TR APS +   VA   RA
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270


>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
           protein.
          Length = 1759

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -3

Query: 254 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 171
           GY    GP  P  +  GP  P  PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414


>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
           protein.
          Length = 1758

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -3

Query: 254 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 171
           GY    GP  P  +  GP  P  PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413


>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
           isoform a protein.
          Length = 1758

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -3

Query: 254 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 171
           GY    GP  P  +  GP  P  PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413


>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
           isoform b protein.
          Length = 1759

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -3

Query: 254 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 171
           GY    GP  P  +  GP  P  PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414


>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
           collagen protein.
          Length = 1795

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -3

Query: 254 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 171
           GY    GP  P  +  GP  P  PG EG
Sbjct: 423 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 450


>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
           protein F29G6.3c protein.
          Length = 1453

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -1

Query: 358 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 191
           L G  Q +V  +VP  +H+    +D++    L     S+A+G V  +H GV + H  H
Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269


>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
           protein F29G6.3b protein.
          Length = 1785

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -1

Query: 358 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 191
           L G  Q +V  +VP  +H+    +D++    L     S+A+G V  +H GV + H  H
Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269


>Z78543-3|CAB01755.2|  772|Caenorhabditis elegans Hypothetical
           protein F29G6.3a protein.
          Length = 772

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -1

Query: 358 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 191
           L G  Q +V  +VP  +H+    +D++    L     S+A+G V  +H GV + H  H
Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,356,318
Number of Sequences: 27780
Number of extensions: 246093
Number of successful extensions: 1177
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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