Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31365
(614 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 414 e-116
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 414 e-116
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 413 e-116
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 413 e-116
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 413 e-116
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 413 e-116
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 413 e-116
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 413 e-116
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 413 e-116
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 413 e-116
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 390 e-109
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 239 1e-63
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 235 2e-62
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 148 3e-36
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 100 7e-22
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 99 3e-21
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 66 2e-11
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.37
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.49
U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical pr... 29 2.6
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 28 4.6
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 414 bits (1019), Expect = e-116
Identities = 196/204 (96%), Positives = 202/204 (99%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 91 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
GIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV
Sbjct: 151 GIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM 270
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
ES GIHET YNSIMKCD+DIRKDL
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDL 294
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 414 bits (1019), Expect = e-116
Identities = 196/204 (96%), Positives = 202/204 (99%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 91 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
GIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV
Sbjct: 151 GIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM 270
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
ES GIHET YNSIMKCD+DIRKDL
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDL 294
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 413 bits (1018), Expect = e-116
Identities = 195/204 (95%), Positives = 202/204 (99%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 91 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
G+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV
Sbjct: 151 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM 270
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
ES GIHET YNSIMKCD+DIRKDL
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDL 294
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 413 bits (1018), Expect = e-116
Identities = 195/204 (95%), Positives = 202/204 (99%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 47 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 106
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
G+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV
Sbjct: 107 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 166
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGM
Sbjct: 167 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM 226
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
ES GIHET YNSIMKCD+DIRKDL
Sbjct: 227 ESAGIHETSYNSIMKCDIDIRKDL 250
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 413 bits (1018), Expect = e-116
Identities = 195/204 (95%), Positives = 202/204 (99%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 77 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 136
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
G+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV
Sbjct: 137 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 196
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGM
Sbjct: 197 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM 256
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
ES GIHET YNSIMKCD+DIRKDL
Sbjct: 257 ESAGIHETSYNSIMKCDIDIRKDL 280
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 413 bits (1018), Expect = e-116
Identities = 195/204 (95%), Positives = 202/204 (99%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 91 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
G+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV
Sbjct: 151 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM 270
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
ES GIHET YNSIMKCD+DIRKDL
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDL 294
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 413 bits (1016), Expect = e-116
Identities = 194/204 (95%), Positives = 202/204 (99%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 91 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
G+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV
Sbjct: 151 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGM 270
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
ES GIHET YNSIMKCD+DIRKDL
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDL 294
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 413 bits (1016), Expect = e-116
Identities = 194/204 (95%), Positives = 202/204 (99%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 91 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
G+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV
Sbjct: 151 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGM 270
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
ES GIHET YNSIMKCD+DIRKDL
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDL 294
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 413 bits (1016), Expect = e-116
Identities = 194/204 (95%), Positives = 202/204 (99%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 91 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
G+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV
Sbjct: 151 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGM 270
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
ES GIHET YNSIMKCD+DIRKDL
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDL 294
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 413 bits (1016), Expect = e-116
Identities = 194/204 (95%), Positives = 202/204 (99%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 91 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
G+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV
Sbjct: 151 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGM 270
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
ES GIHET YNSIMKCD+DIRKDL
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDL 294
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 390 bits (960), Expect = e-109
Identities = 182/204 (89%), Positives = 194/204 (95%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMFETFN+PAMYV IQAVLSLYASGRTT
Sbjct: 90 FYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTT 149
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
GIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+FTTTAEREIV
Sbjct: 150 GIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIV 209
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKEKLCYVA DFE E+A AA+S+SLEKSYELPDGQVITIGNERFRCPE LFQP+F+GM
Sbjct: 210 RDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGM 269
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
E GIHET Y SIMKCDVDIRKDL
Sbjct: 270 EGAGIHETTYQSIMKCDVDIRKDL 293
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 239 bits (585), Expect = 1e-63
Identities = 114/202 (56%), Positives = 146/202 (72%)
Frame = +2
Query: 8 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGI 187
++L++ PEEHPVLLT+APLNP NRE+ +I FETFN PA+Y+ +QAVLSLYA+GRTTG+
Sbjct: 96 DQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGV 155
Query: 188 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 367
VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F + E EIVR+
Sbjct: 156 VLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVRE 215
Query: 368 IKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMES 547
+KE CY+ALD T + S++ SY LPD I I N FR PE LF+P +G E
Sbjct: 216 MKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEW 270
Query: 548 CGIHETVYNSIMKCDVDIRKDL 613
G+ V SIMKCDVD+R+ L
Sbjct: 271 PGMAHVVNQSIMKCDVDLRQTL 292
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 235 bits (574), Expect = 2e-62
Identities = 107/200 (53%), Positives = 143/200 (71%)
Frame = +2
Query: 11 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 190
+L + P+E +LLTE PLNP +NREKM Q+MFE + ++YVA+QAVL+LYA G TG+V
Sbjct: 97 KLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVV 156
Query: 191 LDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 370
+DSGDGV+H P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F +A+ E VR +
Sbjct: 157 VDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQM 216
Query: 371 KEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESC 550
KEKLCY+A D EQE A +T L + Y LPDG+VI +G ERF PE LFQP + +E
Sbjct: 217 KEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKA 276
Query: 551 GIHETVYNSIMKCDVDIRKD 610
G+ E ++ I D+D R D
Sbjct: 277 GLSELLFGCIQASDIDTRLD 296
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 148 bits (359), Expect = 3e-36
Identities = 85/220 (38%), Positives = 121/220 (55%), Gaps = 17/220 (7%)
Frame = +2
Query: 5 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT-- 178
+ LR PE+H LLTE PLN NRE +IMFE+FN P +Y+A+QAVL+L AS +
Sbjct: 105 FKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSRE 164
Query: 179 ------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 340
TG+V+DSGDGV+H +P+ +GY + I + +AGRD+T ++ +L +R ++
Sbjct: 165 ANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPA 224
Query: 341 TAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDG-QVIT-------IGNER 496
E+ + IKEK CYV D +E T K DG IT +G ER
Sbjct: 225 EQSYEVAKMIKEKFCYVCPDVMKEF--VKYDTDAAKWLRTYDGINSITKKPFNVDVGYER 282
Query: 497 FRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDL 613
F PE F P F E + I +T+ I +C +D+R+ L
Sbjct: 283 FLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGL 322
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 100 bits (240), Expect = 7e-22
Identities = 45/107 (42%), Positives = 72/107 (67%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
+ N L P EHPVL +E+ N +A REK+T+IMFE F PA Y++ VLS +A GRT
Sbjct: 113 YENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTH 172
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 322
G+++DSG + VP+++GYA+ HA+++ + G +T+ L ++L ++
Sbjct: 173 GLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQ 219
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 98.7 bits (235), Expect = 3e-21
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 6/207 (2%)
Frame = +2
Query: 11 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 190
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 191 LDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTAEREIV 361
+D G+ V+ VP+ +GY + AI + + + D L L+ Y+F + E+ I+
Sbjct: 326 VDIGERVN-IVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLIL 384
Query: 362 RDIKEKLCYVALDFEQEMATAAAST--SLEKSYELPDGQV-ITIGNERFRCPEALFQPSF 532
R E+ YV D+++E + T SL+ P Q I N RF C E LF+P
Sbjct: 385 RFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKK 444
Query: 533 LGMESCGIHETVYNSIMKCDVDIRKDL 613
G+++ G+H+ ++ +I++C +D R+ L
Sbjct: 445 WGLDTKGLHQLIHEAILQCPIDSRRTL 471
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 66.1 bits (154), Expect = 2e-11
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 26/200 (13%)
Frame = +2
Query: 92 TQIMFETFNSPAMYVAIQAVLSLYASGRTTG----IVLDSGDGVSHTVPIYEGYALPHAI 259
++I+F+ F ++ + L S + +V+DSG + G + ++
Sbjct: 111 SEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSV 170
Query: 260 LRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA---A 430
+R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M A
Sbjct: 171 IRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQ 228
Query: 431 STSLEKSYELPD------GQV-------------ITIGNERFRCPEALFQPSFLGMESCG 553
+ K Y +PD G V I +G ERF PE LF PS + ++ CG
Sbjct: 229 ENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCG 288
Query: 554 IHETVYNSIMKCDVDIRKDL 613
+ E V SI +C +R L
Sbjct: 289 VAEAVIESICQCPEALRPAL 308
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 66.1 bits (154), Expect = 2e-11
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 26/200 (13%)
Frame = +2
Query: 92 TQIMFETFNSPAMYVAIQAVLSLYASGRTTG----IVLDSGDGVSHTVPIYEGYALPHAI 259
++I+F+ F ++ + L S + +V+DSG + G + ++
Sbjct: 111 SEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSV 170
Query: 260 LRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA---A 430
+R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M A
Sbjct: 171 IRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQ 228
Query: 431 STSLEKSYELPD------GQV-------------ITIGNERFRCPEALFQPSFLGMESCG 553
+ K Y +PD G V I +G ERF PE LF PS + ++ CG
Sbjct: 229 GNTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCG 288
Query: 554 IHETVYNSIMKCDVDIRKDL 613
+ E V SI +C +R L
Sbjct: 289 VAEAVIESICQCPEALRPAL 308
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 210 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 115
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.49
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -2
Query: 355 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 221
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical
protein F59A3.8 protein.
Length = 577
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +1
Query: 217 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGNRS*HQGEALLCRP 396
++ +L++ S PR PP G + ++P+ DP G V+ + + + H E+L P
Sbjct: 72 NKPNLKKSPSNPRIPPGGSHPRKKPKVPNRDP--SGKHVNSDKKKPSAEAHDKESLSSPP 129
Query: 397 RLRAG 411
+ AG
Sbjct: 130 QTDAG 134
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 4.6
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2
Query: 59 PLNPKANREKMTQIMF-ETFNSPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 229
PL+ K+ K T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 235 PLDAKSKGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,550,385
Number of Sequences: 27780
Number of extensions: 228923
Number of successful extensions: 826
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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