Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31365
(614 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 394 e-110
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 394 e-110
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 394 e-110
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 390 e-109
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 390 e-109
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 390 e-109
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 389 e-109
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 388 e-108
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 387 e-108
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 362 e-100
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 330 3e-91
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 328 2e-90
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 226 8e-60
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 132 2e-31
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 128 3e-30
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 118 4e-27
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 99 1e-21
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 93 2e-19
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 84 8e-17
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 79 2e-15
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 36 0.016
At5g43500.2 68418.m05318 expressed protein 36 0.028
At5g43500.1 68418.m05319 expressed protein 36 0.028
At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PG... 29 1.9
At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, pu... 29 2.4
At3g24130.1 68416.m03030 pectinesterase family protein contains ... 29 2.4
At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive eff... 29 2.4
At5g67080.1 68418.m08458 protein kinase family protein contains ... 29 3.2
At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1) c... 29 3.2
At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1) c... 29 3.2
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 29 3.2
At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I) i... 28 5.7
At4g30520.1 68417.m04333 leucine-rich repeat family protein / pr... 27 7.5
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 27 9.9
At2g39480.1 68415.m04845 ABC transporter family protein related ... 27 9.9
At2g06010.1 68415.m00657 expressed protein 27 9.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 394 bits (971), Expect = e-110
Identities = 186/204 (91%), Positives = 195/204 (95%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 92 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 151
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT+AEREIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIV 211
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RD+KEKL Y+ALD+EQEM TA S+S+EKSYELPDGQVITIG ERFRCPE LFQPS +GM
Sbjct: 212 RDVKEKLAYIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGM 271
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
E+ GIHET YNSIMKCDVDIRKDL
Sbjct: 272 EAAGIHETTYNSIMKCDVDIRKDL 295
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 394 bits (969), Expect = e-110
Identities = 184/204 (90%), Positives = 196/204 (96%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 92 FYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTT 151
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIV 211
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKEKLCY+ALD+EQE+ TA S+S+EK+YELPDGQVITIG+ERFRCPE L+QPS +GM
Sbjct: 212 RDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGM 271
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
E+ GIHET YNSIMKCDVDIRKDL
Sbjct: 272 ENAGIHETTYNSIMKCDVDIRKDL 295
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 394 bits (969), Expect = e-110
Identities = 184/204 (90%), Positives = 196/204 (96%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 92 FYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTT 151
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIV 211
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKEKLCY+ALD+EQE+ TA S+S+EK+YELPDGQVITIG+ERFRCPE L+QPS +GM
Sbjct: 212 RDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGM 271
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
E+ GIHET YNSIMKCDVDIRKDL
Sbjct: 272 ENAGIHETTYNSIMKCDVDIRKDL 295
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 390 bits (959), Expect = e-109
Identities = 183/204 (89%), Positives = 195/204 (95%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT
Sbjct: 92 FYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 151
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
GIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIV 211
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKEKL +VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GM
Sbjct: 212 RDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGM 271
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
E+ GIHET YNSIMKCDVDIRKDL
Sbjct: 272 EAAGIHETTYNSIMKCDVDIRKDL 295
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 390 bits (959), Expect = e-109
Identities = 183/204 (89%), Positives = 195/204 (95%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT
Sbjct: 92 FYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 151
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
GIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIV 211
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKEKL +VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GM
Sbjct: 212 RDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGM 271
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
E+ GIHET YNSIMKCDVDIRKDL
Sbjct: 272 EAAGIHETTYNSIMKCDVDIRKDL 295
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 390 bits (959), Expect = e-109
Identities = 183/204 (89%), Positives = 195/204 (95%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT
Sbjct: 92 FYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 151
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
GIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIV 211
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKEKL +VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GM
Sbjct: 212 RDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGM 271
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
E+ GIHET YNSIMKCDVDIRKDL
Sbjct: 272 EAAGIHETTYNSIMKCDVDIRKDL 295
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 389 bits (957), Expect = e-109
Identities = 184/204 (90%), Positives = 195/204 (95%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 92 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 151
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIV 211
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RD+KEKL Y+ALDFEQE+ T+ S+S+EKS+ELPDGQVITIG ERFRCPE LFQPS +GM
Sbjct: 212 RDMKEKLSYIALDFEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGM 271
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
E+ GIHET YNSIMKCDVDIRKDL
Sbjct: 272 ENPGIHETTYNSIMKCDVDIRKDL 295
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 388 bits (954), Expect = e-108
Identities = 183/204 (89%), Positives = 195/204 (95%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 92 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 151
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIV 211
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RD+KEKL Y+ALD+EQE+ T+ S+S+EKS+ELPDGQVITIG ERFRCPE LFQPS +GM
Sbjct: 212 RDMKEKLSYIALDYEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGM 271
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
E+ GIHET YNSIMKCDVDIRKDL
Sbjct: 272 ENPGIHETTYNSIMKCDVDIRKDL 295
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 387 bits (952), Expect = e-108
Identities = 185/204 (90%), Positives = 193/204 (94%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTT
Sbjct: 92 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTT 151
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIV 211
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKEKL YVALD+EQE+ TA +S+S+EK+YELPDGQVITIG ERFRCPE LFQPS +GM
Sbjct: 212 RDIKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGM 271
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
E+ GIHET YNSIMKCDVDIRKDL
Sbjct: 272 EAPGIHETTYNSIMKCDVDIRKDL 295
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 362 bits (890), Expect = e-100
Identities = 165/204 (80%), Positives = 187/204 (91%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELR+ PEEHP+LLTEAPLNPK NREKMTQIMFE+F P+MY+ IQAVLSLY+SGRTT
Sbjct: 93 FYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTT 152
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+YL KI+ ERGY++TT+AEREIV
Sbjct: 153 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYTTSAEREIV 212
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKEKLCY+A+D+EQEM A S++++++YELPDGQVITIG ERFRCPE LFQ S +GM
Sbjct: 213 RDIKEKLCYIAVDYEQEMEKATTSSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIGM 272
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
E+ GIHET YNSIMKCDVDIRKDL
Sbjct: 273 ETSGIHETTYNSIMKCDVDIRKDL 296
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 330 bits (812), Expect = 3e-91
Identities = 157/204 (76%), Positives = 179/204 (87%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FY+ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTT
Sbjct: 47 FYSELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTT 106
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
G VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY T+AERE+V
Sbjct: 107 GTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY---TSAEREVV 163
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKE+ Y+ALD+EQEM A S++++++YELPDGQVITIG ERFRCPE LFQPS +GM
Sbjct: 164 RDIKEQFGYIALDYEQEMEKATKSSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIGM 223
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
E+ GIHE YNSIMKCD DIRKDL
Sbjct: 224 ETSGIHEKTYNSIMKCDDDIRKDL 247
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 328 bits (806), Expect = 2e-90
Identities = 151/204 (74%), Positives = 175/204 (85%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+SGRTT
Sbjct: 81 FYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTT 140
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
G+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTDYL++I+TERGY++TT+AEREIV
Sbjct: 141 GVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSAEREIV 200
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
RDIKEKLCYVALD+EQEM +++K+Y LPDGQ ITI ERF CPE LFQPS +G
Sbjct: 201 RDIKEKLCYVALDYEQEMEKTTKGWTIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGK 260
Query: 542 ESCGIHETVYNSIMKCDVDIRKDL 613
ES GIHE NSI+KC VD R+D+
Sbjct: 261 ESSGIHEATRNSILKCPVDTRRDM 284
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 226 bits (553), Expect = 8e-60
Identities = 99/201 (49%), Positives = 143/201 (71%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
FYNEL++ P + +LLT+ PLNP NREKM + MFE +N +++ IQAVL+LYA G T
Sbjct: 91 FYNELKINPSDCKILLTDPPLNPSKNREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLT 150
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 361
G+V+DSGDGV+H VP+ +GY+ PH R+++AGR +T YL+ +L+ RGY+ TA+ E V
Sbjct: 151 GLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTADFETV 210
Query: 362 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 541
R+IKEKLCY++ D+++E +T L K+Y LPDG+VI +G ERF+ PEALF P + +
Sbjct: 211 REIKEKLCYISYDYKRESQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDV 270
Query: 542 ESCGIHETVYNSIMKCDVDIR 604
E G+ + V+ I + D+D R
Sbjct: 271 EGDGMADMVFRCIQEMDIDNR 291
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 132 bits (318), Expect = 2e-31
Identities = 90/246 (36%), Positives = 130/246 (52%), Gaps = 42/246 (17%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 181
F + L + P EHP+LL E PLN + REK ++MFE + PA+++A VL+ +A+GR T
Sbjct: 114 FKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRAT 173
Query: 182 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG------YSF--- 334
+V+D G G + P+++GY L A++ L G LTD L+K L +G YSF
Sbjct: 174 SLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKGIKIRPRYSFKRK 233
Query: 335 ----------------TTTA-----EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKS 451
TT + +R IV DIK+ +C V + + + T+ S
Sbjct: 234 EVRAGEFQVEDVDIPDTTESYKLFCQRMIVGDIKDSICRVPDTPYDDKSYSNIPTT---S 290
Query: 452 YELPDGQVITIGNERFRCPEALFQPSFL----GMESC--------GIHETVYNSIMKCDV 595
YELPDGQ + IG +RF+ P+ +F PS + GME G+ V SI KCDV
Sbjct: 291 YELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCDV 350
Query: 596 DIRKDL 613
DIR++L
Sbjct: 351 DIRREL 356
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 128 bits (309), Expect = 3e-30
Identities = 73/215 (33%), Positives = 111/215 (51%), Gaps = 12/215 (5%)
Frame = +2
Query: 5 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT-- 178
+N LR PE+H LLTE+PL P +RE +I+FETFN P +Y+A+ +VL+L A T
Sbjct: 110 FNYLRCDPEDHYFLLTESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSK 169
Query: 179 ---TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 349
TG+V+D GDG +H VP+ EGY + I + +AG+D+T ++ +++ ERG +
Sbjct: 170 CEMTGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDS 229
Query: 350 REIVRDIKEKLCYVALD----FEQEMATAAASTSLEKSYELPDGQVIT--IGNERFRCPE 511
++ R +KE CY D F + A K + G T +G ERF PE
Sbjct: 230 FDVARKVKEMYCYTCSDIVKEFNKHDKEPAKYIKQWKGVKPKTGAPYTCDVGYERFLGPE 289
Query: 512 ALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDL 613
F P + + + + I +D R+ L
Sbjct: 290 VFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRAL 324
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 118 bits (283), Expect = 4e-27
Identities = 73/183 (39%), Positives = 96/183 (52%)
Frame = +2
Query: 32 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 211
E +L T+ PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G
Sbjct: 88 EGNILFTDPLCTPKAIREQLVQLMFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGK 147
Query: 212 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 391
P+ EG A R +L G +LT + L + S + V +KE+
Sbjct: 148 IDIAPVLEGAVQHIASKRFELGGTELTKLFAQELGKTNPSMNLSMSD--VEKLKEQYANC 205
Query: 392 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 571
A E E+A + + LPDGQVI+IG ER+ EALFQPS LG+E GI E +
Sbjct: 206 A---EDEIAYKKTQNCEIEQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVEQLV 262
Query: 572 NSI 580
I
Sbjct: 263 RII 265
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 99 bits (238), Expect = 1e-21
Identities = 61/173 (35%), Positives = 96/173 (55%), Gaps = 11/173 (6%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI-QAVLSLYASGRT 178
F + L +AP +LLTEAPL+ + + +++FE F ++Y+A Q+++ LY + R
Sbjct: 84 FTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLYIAHPQSLVHLYEASRQ 143
Query: 179 T---------GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 331
+V+D G +H VP+ + L HAI R+DL G+ T+YL ++++ R S
Sbjct: 144 PDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELVSYR--S 201
Query: 332 FTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKS-YELPDGQVITIG 487
E +V D KEKLC+V+LD +++ A +L KS Y LPDG T G
Sbjct: 202 INVMDETFLVDDAKEKLCFVSLDLLRDLRLARNGNTLIKSTYVLPDGVTHTKG 254
Score = 41.9 bits (94), Expect = 3e-04
Identities = 25/83 (30%), Positives = 40/83 (48%)
Frame = +2
Query: 341 TAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALF 520
T + V+D + +++L E+E K ++ + I + NERF PE LF
Sbjct: 250 THTKGYVKDPQAAKRFLSLS-EKESVVVMDKVGERKKADMNKNE-IDLTNERFLVPETLF 307
Query: 521 QPSFLGMESCGIHETVYNSIMKC 589
QP+ LGM G+ E + +I C
Sbjct: 308 QPADLGMNQAGLAECIVRAINSC 330
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 92.7 bits (220), Expect = 2e-19
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 11/207 (5%)
Frame = +2
Query: 5 YNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQAVL 154
+ ++V P P++++ PL + KA+R ++ +F N PA+ QAVL
Sbjct: 184 FTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQAVL 242
Query: 155 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERGYS 331
+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E S
Sbjct: 243 ALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNIS 302
Query: 332 FTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPE 511
F + VR +KEKLCYVALD++ E+ S + S E+ T+ ERF+ E
Sbjct: 303 FQSL---YTVRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGE 354
Query: 512 ALFQPSFLGMESCGIHETVYNSIMKCD 592
LFQP GM + +H+ V + CD
Sbjct: 355 ILFQPRLAGMRAMSLHQAVSLCMDHCD 381
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 83.8 bits (198), Expect = 8e-17
Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Frame = +2
Query: 5 YNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQAVL 154
+ ++V P P++++ PL + KA+R ++ +F N PA+ QAVL
Sbjct: 184 FTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQAVL 242
Query: 155 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERGYS 331
+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E S
Sbjct: 243 ALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNIS 302
Query: 332 FTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPE 511
F + VR +KEKLCYVALD++ E+ S + S E+ T+ ERF+ E
Sbjct: 303 FQSL---YTVRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGE 354
Query: 512 ALFQPSFLGMESCGIHETVY 571
LFQP G+ +H+ VY
Sbjct: 355 ILFQPRLAGII---VHKLVY 371
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 79.4 bits (187), Expect = 2e-15
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 5/133 (3%)
Frame = +2
Query: 32 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLS-----LYASGRTTGIVLD 196
+HP+L+TE NP +R KM +++FET+ PA+ + A S L+ + GIVL
Sbjct: 116 DHPILITECACNPVQSRSKMAELLFETYGVPAVAFGVDAAFSYKYNQLHGICKKDGIVLC 175
Query: 197 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 376
G +H++P +G + R ++ G +TDYL ++L+ + ++ E D+K
Sbjct: 176 PGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYLKQLLSLKYPFHSSRFTWEKAEDLKL 235
Query: 377 KLCYVALDFEQEM 415
+ CY+A D+ E+
Sbjct: 236 EHCYIAPDYASEI 248
Score = 44.8 bits (101), Expect = 5e-05
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +2
Query: 347 EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP---DGQVITIGNERFRCPEAL 517
E E+ R + +L + F Q++ + TS E P + I IG ERFRCPE L
Sbjct: 544 EAELAR-LSSRLQEIDPTFVQKVEGELSQTSGEVPRVRPLTEEDYKIVIGIERFRCPEIL 602
Query: 518 FQPSFLGMESCGIHETVYNSIMKCDVD 598
F P+ +G++ G+ E SI + D
Sbjct: 603 FHPNLIGIDQVGLDEMAGTSIRRLPHD 629
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 36.3 bits (80), Expect = 0.016
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2
Query: 2 FYNELRVAPEEHPVLLTEAPLNPKANREK 88
F N L + P EHP+LL E PLN + REK
Sbjct: 108 FRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 35.5 bits (78), Expect = 0.028
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +2
Query: 35 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 214
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 238 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 296
Query: 215 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 310
V + +G +LP+ L G D+ L+ I
Sbjct: 297 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 35.5 bits (78), Expect = 0.028
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +2
Query: 35 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 214
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 250 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 308
Query: 215 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 310
V + +G +LP+ L G D+ L+ I
Sbjct: 309 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 340
>At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PGP1)
identical to P-glycoprotein GI:3849833 from [Arabidopsis
thaliana]; homologous to mammalian mdr gene,contains
ATP-binding cassette; related to multi drug resistance
proteins
Length = 1286
Score = 29.5 bits (63), Expect = 1.9
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 167 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 346
+G+T +V SG G S V + E + P++ L L G+DL ++ L ++ +
Sbjct: 395 AGKTIALVGSSGSGKSTVVSLIERFYDPNSGQVL-LDGQDLKTLKLRWLRQQ-IGLVSQE 452
Query: 347 EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSY--ELPDGQVITIG 487
IKE + D +Q AA + S+ +LPDG +G
Sbjct: 453 PALFATSIKENILLGRPDADQVEIEEAARVANAHSFIIKLPDGFDTQVG 501
>At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein GI:3849833
from [Arabidopsis thaliana]; contains Pfam profiles
PF00005: ABC transporter and PF00664: ABC transporter
transmembrane region; identical to cDNA MDR-like
p-glycoprotein (At3g28860) GI:24324261
Length = 1252
Score = 29.1 bits (62), Expect = 2.4
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 6/158 (3%)
Frame = +2
Query: 32 EHPVLLTEAPLNPKANREKMTQIMFE--TFNSPAM--YVAIQAVLSLYASGRTTGIVLDS 199
+ P ++ + PL+ K + I F+ TF+ P+ + + + SG+T +V S
Sbjct: 344 QRPTIIQD-PLDGKCLDQVHGNIEFKDVTFSYPSRPDVMIFRNFNIFFPSGKTVAVVGGS 402
Query: 200 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 379
G G S V + E + P++ ++ L G ++ +K L E+ I E
Sbjct: 403 GSGKSTVVSLIERFYDPNS-GQILLDGVEIKTLQLKFLREQ-IGLVNQEPALFATTILEN 460
Query: 380 LCYVALDFEQEMATAAASTSLEKSY--ELPDGQVITIG 487
+ Y D AAAS + S+ LP G +G
Sbjct: 461 ILYGKPDATMVEVEAAASAANAHSFITLLPKGYDTQVG 498
>At3g24130.1 68416.m03030 pectinesterase family protein contains
Pfam profile: PF01095 Pectinesterase
Length = 335
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 349 LSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 221
L G G+R+T + D H V Q T ++ V +S+TF + Y
Sbjct: 86 LVGAGKRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSY 128
>At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1065
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +2
Query: 350 REIVRDIKEKLCYVALDFEQEMATAAASTSLE 445
R +++D KE+ C+ + ++ +A A AST++E
Sbjct: 826 RNLIQDAKERGCFHSAGEDESLAQAIASTNIE 857
>At5g67080.1 68418.m08458 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 344
Score = 28.7 bits (61), Expect = 3.2
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 1/126 (0%)
Frame = +2
Query: 137 AIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD-LTDYLMKIL 313
A+ V+ SG+T + + + +S + I G +P L GRD L+ +K
Sbjct: 195 ALGCVVVEMFSGKTAWSLKEGSNFMSLLLRIGVGDEVPMIPEELSEQGRDFLSKCFVKDP 254
Query: 314 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNE 493
+R + + D+ + DF M T STS +E PD ++ G++
Sbjct: 255 KKRWTAEMLLNHPFVTVDVDHDVLVKEEDFVVNMKTEDVSTSPRCPFEFPDWVSVSSGSQ 314
Query: 494 RFRCPE 511
P+
Sbjct: 315 TIDSPD 320
>At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 217 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 333
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 217 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 333
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 94 GHLLPVGLGVEGGFGEQHGVLLGG 23
G+ + VG+G+ GG G+ GV +GG
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGG 51
>At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I)
identical to P II nitrogen sensing protein GLB I
(GI:7268574) [Arabidopsis thaliana]; similar to nitrogen
regulatory protein P-II (PII signal transducing protein)
(SP:O30794) {Nostoc punctiforme}
Length = 196
Score = 27.9 bits (59), Expect = 5.7
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -3
Query: 237 PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATY-MAGELKVSNMIWVIFSLLALGLR 61
PS + V ++PS S +PVV + S+ Y + ++ + V +LL +G+R
Sbjct: 40 PSCLDLVTKSPSNNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIR 99
Query: 60 GASVSST---GCSSGAT 19
G +VS G G+T
Sbjct: 100 GVTVSDVRGFGAQGGST 116
>At4g30520.1 68417.m04333 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 648
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -3
Query: 591 SHFMMELYTVSWMPHDSIPRKEGWKRASGQRNLSLPMVIT*PSGS 457
S F MEL +S H ++ R G+ SG+R L P + P+GS
Sbjct: 343 SQFRMELEMISLAVHKNLLRLIGYCATSGERLLVYPYM---PNGS 384
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 284 DLTDYL-MKILTERGYSFTTTAEREI-VRDIKEKLCY 388
D TD + +KI + T + ER I VRD+K+ +CY
Sbjct: 6 DFTDLIRIKIKILHSTTHTLSVERTIPVRDLKQDICY 42
>At2g39480.1 68415.m04845 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1407
Score = 27.1 bits (57), Expect = 9.9
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 170 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 313
G+T +V SG G S + + E Y P A L L GRDL Y ++ L
Sbjct: 1186 GQTVAVVGVSGSGKSTIISLIERYYDPVAGQVL-LDGRDLKSYNLRWL 1232
>At2g06010.1 68415.m00657 expressed protein
Length = 188
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 544 FHTQEGRLEESLGTTEPLVTDGDHL 470
F+ GRLE SL E +VT D+L
Sbjct: 164 FNMSSGRLEASLDRVEAIVTHSDYL 188
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,392,337
Number of Sequences: 28952
Number of extensions: 228910
Number of successful extensions: 854
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -