Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31364
(799 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1498 + 26995209-26995752,26995945-26996513 32 0.46
01_06_1201 - 35380338-35380496,35381200-35381322,35381521-353820... 31 1.1
03_01_0082 + 653041-653137,653219-653496,653596-653689,653804-65... 31 1.4
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 30 1.9
08_01_0380 - 3376475-3377116,3377722-3377919,3378381-3378556,337... 30 2.5
05_06_0235 - 26609049-26609468,26610068-26610343,26611579-266117... 29 4.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 4.3
02_05_0240 - 27110752-27111180 29 4.3
07_03_0943 - 22778877-22780970,22781376-22781480,22781481-227820... 29 5.7
11_01_0511 + 3969874-3970269 28 7.5
08_01_1019 - 10290820-10291393,10293978-10294348 28 7.5
05_05_0127 - 22580720-22580808,22580936-22580987,22581703-225819... 28 7.5
03_05_0520 + 25139314-25139364,25139580-25139711,25141594-251417... 28 7.5
03_02_0485 - 8808139-8808618 28 7.5
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 28 9.9
>07_03_1498 + 26995209-26995752,26995945-26996513
Length = 370
Score = 32.3 bits (70), Expect = 0.46
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +1
Query: 319 RQLAEPSHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSD 498
++L P HW + P + + G G+ RF + TP E D+ + VH+ + SD
Sbjct: 245 KELEAPQHWSEMRCPQLANLGSGRFCIARFFHTWTTPMEPNSFGYDS-IKVHSFSDFDSD 303
Query: 499 TKSVYREYNREFLLPKGTN 555
+ S+ E F + GT+
Sbjct: 304 SDSIEFE-EHSFTVLTGTD 321
>01_06_1201 - 35380338-35380496,35381200-35381322,35381521-35382066,
35382285-35382392,35382695-35383225,35383614-35383743,
35384225-35385081,35385303-35385408,35387119-35387230,
35389255-35389347,35389723-35389771,35389859-35389897,
35390671-35390757,35391613-35391873,35391957-35392166,
35392413-35393507
Length = 1501
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 120 EKYPHQA---WRFFGYRYRILKHQRALRCRNEEDGRRNEQIQIRTHEQRKQQFLQE 278
EKYP A RF G+R R+L + L E+G I +E+RK +FL+E
Sbjct: 1213 EKYPVMAELIHRFQGFRERLLADPKFLHRLAIEEGISITTTLIAQYEKRKGRFLEE 1268
>03_01_0082 + 653041-653137,653219-653496,653596-653689,653804-653886,
654027-654247,654395-654533,654628-654710,654824-655036,
655099-655494,655587-655758,656085-656276,656363-656569,
656661-656753,656957-657156,657329-657838,658114-658184,
658322-658963,659057-659207,659425-659665
Length = 1360
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -3
Query: 167 SVSITEKSPSLMGIFLLRPLSAIFHVICRVEI-VETKQTLKRSRVNTFHWNNTH 9
S+ I+ S ++ ++L+P A IC + V++KQ+LK TF W +TH
Sbjct: 884 SLLISVGSKQVLTTWVLQPKVAENRHICSSGLDVDSKQSLKGDSAMTFQWLSTH 937
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +1
Query: 382 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEK 492
D K +++RFD+ + EE+ V D+ L++ +H+++
Sbjct: 140 DDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKE 176
>08_01_0380 -
3376475-3377116,3377722-3377919,3378381-3378556,
3378681-3379703,3380476-3380593
Length = 718
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 409 DVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKGT 552
DVS+ IVV +DNK+L A H S S +R + + +LP T
Sbjct: 41 DVSRSMDGSIVVHGLDNKILGDA-HPSSSSATSCFRTQSFDTVLPAST 87
>05_06_0235 -
26609049-26609468,26610068-26610343,26611579-26611746,
26611850-26611945
Length = 319
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 655 WIGMFLSVMASCGNGASTVSTPSPGQRKT*WP-QDLFPWATKTPCCILCTQI 503
W G+ V A+CG+G S + + WP ++ T+ PCCI+ T +
Sbjct: 82 WCGVDEEVEAACGDGV----VSSSNEMQELWPLGEVDQKGTRFPCCIVWTPL 129
>04_03_0018 -
9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 425 LPKRSLLRLSTTNYWSTPNTRRNLIRNLCTE 517
L ++S L LST++ +S + RRNL+R+ T+
Sbjct: 715 LKRKSFLSLSTSSIFSPLSPRRNLLRSTSTD 745
>02_05_0240 - 27110752-27111180
Length = 142
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 590 RCAYRGSAIATTRHHG-QEHSYPEALERSHHSPRV 691
RC + A A RHH Q + EALE+ HH RV
Sbjct: 4 RCFFPREAEAGGRHHHHQSKAAAEALEQLHHGGRV 38
>07_03_0943 -
22778877-22780970,22781376-22781480,22781481-22782059,
22782149-22782187,22782340-22782372
Length = 949
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 168 ILKHQRALRCRNEEDGRRNEQIQIRTH 248
+ K +R + C+NE GRRN R H
Sbjct: 629 VAKRRRLVSCKNERTGRRNTAANKRQH 655
>11_01_0511 + 3969874-3970269
Length = 131
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 451 VDNKLLVHAKHEEKSDTKSVYREYNREFLLP--KGTNPEAIKSFAVP 585
VD++ A EKS +SV R R LLP +G P + ++A+P
Sbjct: 21 VDSEPTREATEREKSLPRSVTRRRRRPHLLPARRGAPPGVVTAWAMP 67
>08_01_1019 - 10290820-10291393,10293978-10294348
Length = 314
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -1
Query: 544 WATKTPCCILCTQISYQISPRVWRGPVICCR 452
W+ TP C L S VWRG + CCR
Sbjct: 20 WSEMTPVC-LAEAFSRLGLEDVWRGAMACCR 49
>05_05_0127 -
22580720-22580808,22580936-22580987,22581703-22581908,
22582019-22582152,22582239-22582369,22583333-22583392,
22583615-22583755,22583880-22584347,22584524-22584686,
22585373-22585476,22585755-22585853,22586177-22586281,
22586516-22586596,22587168-22587986,22588497-22588553
Length = 902
Score = 28.3 bits (60), Expect = 7.5
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Frame = -3
Query: 617 QWRFHGKHTVPGTAKDLMASGFVPLGNKNSLL-----YSLYTDFVSDFSSCLAWTSNLLS 453
QW ++ HTVP A D P+GN NS++ YS Y +W SN S
Sbjct: 234 QWPYYYNHTVPNPAGD-------PVGNSNSIVNTTSSYS-YPSIQPPPPGTTSWKSNSSS 285
Query: 452 TVLTTISS 429
++ I +
Sbjct: 286 SIAPPIQA 293
>03_05_0520 +
25139314-25139364,25139580-25139711,25141594-25141731,
25143191-25143241,25143662-25143751,25143854-25144000,
25144108-25144218,25144307-25144375,25144777-25145517,
25145840-25146004,25146376-25146442,25146580-25146704,
25148714-25148983,25149065-25149199,25149316-25149497,
25149669-25149744
Length = 849
Score = 28.3 bits (60), Expect = 7.5
Identities = 9/31 (29%), Positives = 24/31 (77%)
Frame = +1
Query: 154 VIDTEFSSIRERFDAEMRKMEEEMSKFRSEL 246
V DTE ++ +E+F+A+++K +++ ++R ++
Sbjct: 18 VYDTENANQKEKFEADLKKEIKKLQRYRDQI 48
>03_02_0485 - 8808139-8808618
Length = 159
Score = 28.3 bits (60), Expect = 7.5
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Frame = +1
Query: 409 DVSQYTPEEIVVKTVDNKLLVHA-----KHEEKSDT-KSVYR---EYNREFLLPKGTNPE 561
DV EE+ V+ D +L + + EEKSD V R ++ R F LP+ T PE
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 562 AIKSFAVPG--TVCLP 603
IK+ G TV +P
Sbjct: 128 QIKASMENGVLTVTVP 143
>01_01_0128 -
1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 162 YRILKHQRALRCRNEEDGRRNEQIQIRTHEQRK 260
Y L+ QR R R EE+ R+ E+ + R +RK
Sbjct: 837 YLNLEEQRLQRLREEEEARKQEERRKREETERK 869
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,536,403
Number of Sequences: 37544
Number of extensions: 407960
Number of successful extensions: 1329
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1328
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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