Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31364
         (799 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   4.3  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   4.3  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   4.3  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   5.7  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   7.6  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   7.6  

>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
 Frame = +1

Query: 157 IDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQLAEP 336
           +D  + +++    A M+K+ E+M+   S +  +   N+ K          ++ S      
Sbjct: 81  LDGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNK-----IPEGANTTSTTKIID 135

Query: 337 SHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPE-EIVVKTVDNK 462
            H  ++N     D  D  +  +R  V    P+ E ++ TV ++
Sbjct: 136 GHVVTINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSE 178


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
 Frame = +1

Query: 157 IDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQLAEP 336
           +D  + +++    A M+K+ E+M+   S +  +   N+ K          ++ S      
Sbjct: 81  LDGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNK-----IPEGANTTSTTKIID 135

Query: 337 SHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPE-EIVVKTVDNK 462
            H  ++N     D  D  +  +R  V    P+ E ++ TV ++
Sbjct: 136 GHVVTINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSE 178


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
 Frame = +1

Query: 157 IDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQLAEP 336
           +D  + +++    A M+K+ E+M+   S +  +   N+ K          ++ S      
Sbjct: 81  LDGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNK-----IPEGANTTSTTKIID 135

Query: 337 SHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPE-EIVVKTVDNK 462
            H  ++N     D  D  +  +R  V    P+ E ++ TV ++
Sbjct: 136 GHVVAINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSE 178


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = -3

Query: 605 HGKHTVPGTAKDLMASGFVPLGNKNSLLYSLYTDF 501
           H  H +PG    +  +    L  + S  YSLY  F
Sbjct: 332 HNLHGMPGILGGIFGALMAALATEASYDYSLYEIF 366


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +1

Query: 619 HNSPSRTGTFLSRSTGAVSSFATSP 693
           HNSPS TG+    S    SS +TSP
Sbjct: 59  HNSPSPTGSSPQHSG---SSASTSP 80


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 462 FVVDSLNNDLF 430
           F+VD L NDLF
Sbjct: 96  FIVDRLRNDLF 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,719
Number of Sequences: 438
Number of extensions: 4598
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)