Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31363
(341 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical pr... 131 1e-31
U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel... 27 3.5
U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel... 27 3.5
U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel... 27 3.5
U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel... 27 3.5
AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltag... 27 3.5
AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calciu... 27 3.5
AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calciu... 27 3.5
AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calciu... 27 3.5
AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-depen... 27 3.5
Z81564-13|CAB04579.1| 243|Caenorhabditis elegans Hypothetical p... 27 4.7
Z81564-12|CAB04578.1| 263|Caenorhabditis elegans Hypothetical p... 27 4.7
U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde dehydr... 27 4.7
AL032643-9|CAA21664.1| 243|Caenorhabditis elegans Hypothetical ... 27 4.7
AL032643-8|CAA21663.1| 263|Caenorhabditis elegans Hypothetical ... 27 4.7
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 26 6.1
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 26 6.1
Z38016-1|CAA86114.1| 856|Caenorhabditis elegans serine/threonin... 26 8.1
AL117207-1|CAB60406.1| 856|Caenorhabditis elegans Hypothetical ... 26 8.1
>Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical
protein F13D12.4a protein.
Length = 523
Score = 131 bits (317), Expect = 1e-31
Identities = 56/83 (67%), Positives = 70/83 (84%)
Frame = +2
Query: 20 MINSNPYGNGTAIFTTNGATARKFSADIDVGQVGVNVPIPVPLSMFSFSGTRGSLLGTNH 199
+IN+NPYGNGTAIFT+NGATARKF+ ++DVGQ+G+NVPIPVPL MFSF+G+RGS LG +
Sbjct: 427 IINNNPYGNGTAIFTSNGATARKFTNEVDVGQIGINVPIPVPLPMFSFTGSRGSFLGDLN 486
Query: 200 FCGKQGLDFYTELKMVVSFWRES 268
F GK G+ FYT+ K V +W ES
Sbjct: 487 FYGKAGIQFYTQWKTVTQYWNES 509
>U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform c protein.
Length = 1852
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 232 GVEVQPLLPAEVVSSQ*TSARSRKREHRQR 143
G E+QPL P E+ R R R HR R
Sbjct: 1804 GGELQPLNPGEIEDLDDPEFRPRSRSHRPR 1833
>U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform a protein.
Length = 1837
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 232 GVEVQPLLPAEVVSSQ*TSARSRKREHRQR 143
G E+QPL P E+ R R R HR R
Sbjct: 1789 GGELQPLNPGEIEDLDDPEFRPRSRSHRPR 1818
>U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform d protein.
Length = 1885
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 232 GVEVQPLLPAEVVSSQ*TSARSRKREHRQR 143
G E+QPL P E+ R R R HR R
Sbjct: 1837 GGELQPLNPGEIEDLDDPEFRPRSRSHRPR 1866
>U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform e protein.
Length = 1844
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 232 GVEVQPLLPAEVVSSQ*TSARSRKREHRQR 143
G E+QPL P E+ R R R HR R
Sbjct: 1796 GGELQPLNPGEIEDLDDPEFRPRSRSHRPR 1825
>AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltage
sensitive calciumchannel alpha1 subunit isoform D
protein.
Length = 1844
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 232 GVEVQPLLPAEVVSSQ*TSARSRKREHRQR 143
G E+QPL P E+ R R R HR R
Sbjct: 1796 GGELQPLNPGEIEDLDDPEFRPRSRSHRPR 1825
>AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform C protein.
Length = 1852
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 232 GVEVQPLLPAEVVSSQ*TSARSRKREHRQR 143
G E+QPL P E+ R R R HR R
Sbjct: 1804 GGELQPLNPGEIEDLDDPEFRPRSRSHRPR 1833
>AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform B protein.
Length = 1885
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 232 GVEVQPLLPAEVVSSQ*TSARSRKREHRQR 143
G E+QPL P E+ R R R HR R
Sbjct: 1837 GGELQPLNPGEIEDLDDPEFRPRSRSHRPR 1866
>AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform A protein.
Length = 1837
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 232 GVEVQPLLPAEVVSSQ*TSARSRKREHRQR 143
G E+QPL P E+ R R R HR R
Sbjct: 1789 GGELQPLNPGEIEDLDDPEFRPRSRSHRPR 1818
>AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-dependent
calcium channelalpha13 subunit protein.
Length = 1837
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 232 GVEVQPLLPAEVVSSQ*TSARSRKREHRQR 143
G E+QPL P E+ R R R HR R
Sbjct: 1789 GGELQPLNPGEIEDLDDPEFRPRSRSHRPR 1818
>Z81564-13|CAB04579.1| 243|Caenorhabditis elegans Hypothetical
protein Y54E5A.8b protein.
Length = 243
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 250 YYHLQFGVEVQPLLPAEVVSSQ*TSARSRKRE 155
YY ++ G E+ P L AE++ S A R +E
Sbjct: 52 YYEIRGGKEMTPKLAAEIIQSMGKDADPRLKE 83
>Z81564-12|CAB04578.1| 263|Caenorhabditis elegans Hypothetical
protein Y54E5A.8a protein.
Length = 263
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 250 YYHLQFGVEVQPLLPAEVVSSQ*TSARSRKRE 155
YY ++ G E+ P L AE++ S A R +E
Sbjct: 72 YYEIRGGKEMTPKLAAEIIQSMGKDADPRLKE 103
>U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde
dehydrogenase protein 10 protein.
Length = 506
Score = 26.6 bits (56), Expect = 4.7
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +2
Query: 26 NSNPYGNGTAIFTTNGATARKFSADIDVGQVGVNVPIPVPLSMFSFSGTRGSLLGTNHFC 205
NS PYG +++++ + ++ G V N + LSM F G + S G
Sbjct: 428 NSTPYGLSATVWSSDSDELLNTANELRAGTVWCNTWLARDLSM-PFGGCKQS--GNGREG 484
Query: 206 GKQGLDFYTELKMV 247
L FY++ K V
Sbjct: 485 LHDSLHFYSDAKTV 498
>AL032643-9|CAA21664.1| 243|Caenorhabditis elegans Hypothetical
protein Y54E5A.8b protein.
Length = 243
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 250 YYHLQFGVEVQPLLPAEVVSSQ*TSARSRKRE 155
YY ++ G E+ P L AE++ S A R +E
Sbjct: 52 YYEIRGGKEMTPKLAAEIIQSMGKDADPRLKE 83
>AL032643-8|CAA21663.1| 263|Caenorhabditis elegans Hypothetical
protein Y54E5A.8a protein.
Length = 263
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 250 YYHLQFGVEVQPLLPAEVVSSQ*TSARSRKRE 155
YY ++ G E+ P L AE++ S A R +E
Sbjct: 72 YYEIRGGKEMTPKLAAEIIQSMGKDADPRLKE 103
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -2
Query: 232 GVEVQPLLPAEVVSSQ*TSARSRKREHRQRHGNGHVYAHLTDVDIR 95
G+E +P+ P E + +S S KR R++HG G + H VD++
Sbjct: 665 GIENRPVSPYEQLPI--SSRDSGKR--RKKHGRGSMGRHTLGVDVQ 706
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 128 VPIPVPLSMFSFSGTRGSLLGTNHFCGKQGLDFYTE-LKMVVSFWRESDV 274
+ + P++ + +LL HFC + D +TE +KM S R+ ++
Sbjct: 33 IVVLTPIAYQAIQRIHSNLLNDAHFCQARNRDLWTETMKMARSRGRDEEL 82
>Z38016-1|CAA86114.1| 856|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 856
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 42 GMERLFSPLMARRLGSSPRISTSV 113
G +L SP RR+G SPR+ V
Sbjct: 315 GSTKLDSPTPVRRIGESPRVQRRV 338
>AL117207-1|CAB60406.1| 856|Caenorhabditis elegans Hypothetical
protein Y60A3A.1 protein.
Length = 856
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 42 GMERLFSPLMARRLGSSPRISTSV 113
G +L SP RR+G SPR+ V
Sbjct: 315 GSTKLDSPTPVRRIGESPRVQRRV 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,775,241
Number of Sequences: 27780
Number of extensions: 117472
Number of successful extensions: 361
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 361
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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