Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31363
(341 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 0.44
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 1.8
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 2.4
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 3.1
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 3.1
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 3.1
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 3.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 3.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 3.1
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 20 9.5
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 20 9.5
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 20 9.5
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.2 bits (50), Expect = 0.44
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +2
Query: 26 NSNPYGNGTAIFTTNGATARKFSADIDVGQVGVNVPIPV 142
N+N Y N N + + I++ Q+ V VP+P+
Sbjct: 334 NNNNYNNNNYNNNYNNNCKKLYYNIINIEQIPVPVPVPI 372
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 22.2 bits (45), Expect = 1.8
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = +2
Query: 137 PVPLSMFSFSGTRGSLLGTNHFCGKQGLDFYTELKM 244
P+ + SGTR + C K G+ Y ++ M
Sbjct: 82 PISYKWITRSGTREQFIDMVARCNKAGVRIYVDVIM 117
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.8 bits (44), Expect = 2.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 107 VGQVGVNVPIPVPLSMFSF 163
+ Q+ V VPIPVP+ +F
Sbjct: 108 IEQIPVPVPIPVPVYYGNF 126
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 3.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 107 VGQVGVNVPIPVPLSMFSF 163
+ Q+ V VP+PVP+ +F
Sbjct: 108 IEQIPVPVPVPVPVYYGNF 126
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 3.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 107 VGQVGVNVPIPVPLSMFSF 163
+ Q+ V VP+PVP+ +F
Sbjct: 108 IEQIPVPVPVPVPVYYGNF 126
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 3.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 107 VGQVGVNVPIPVPLSMFSF 163
+ Q+ V VP+PVP+ +F
Sbjct: 108 IEQIPVPVPVPVPVYYGNF 126
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 3.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 107 VGQVGVNVPIPVPLSMFSF 163
+ Q+ V VP+PVP+ +F
Sbjct: 341 IEQIPVPVPVPVPVYYGNF 359
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 3.1
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +3
Query: 258 GGRATCRTRNRAXVCAHNNRL 320
GG +C NRA H RL
Sbjct: 494 GGEYSCMAENRAGKVTHAARL 514
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 3.1
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +3
Query: 258 GGRATCRTRNRAXVCAHNNRL 320
GG +C NRA H RL
Sbjct: 494 GGEYSCMAENRAGKVTHAARL 514
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 19.8 bits (39), Expect = 9.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 103 DIRGELPSRRAISGENSRSIPVRVRVD 23
+I G +R SGEN+ P VRV+
Sbjct: 38 NILGGYDARIRPSGENATDGPAVVRVN 64
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 19.8 bits (39), Expect = 9.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 103 DIRGELPSRRAISGENSRSIPVRVRVD 23
+I G +R SGEN+ P VRV+
Sbjct: 38 NILGGYDARIRPSGENATDGPAIVRVN 64
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 19.8 bits (39), Expect = 9.5
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = -2
Query: 217 PLLPAEVVSSQ*TSARSRKREHRQRHGNGHVYAHLTDVDIRGELP 83
P + A + + ++++R++E + G G A VD+R +P
Sbjct: 1156 PKMMAVEPTDKQANSKTRRQEMMREAGRGIESAKSYVVDVRVHVP 1200
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,585
Number of Sequences: 438
Number of extensions: 1681
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7839909
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -