Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31362
(736 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 412 e-115
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 411 e-115
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 411 e-115
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 409 e-115
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 409 e-115
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 408 e-114
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 408 e-114
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 408 e-114
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 407 e-114
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 377 e-105
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 316 1e-86
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 272 2e-73
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 225 2e-59
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 161 6e-40
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 158 3e-39
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 105 3e-23
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 104 7e-23
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 103 1e-22
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 98 5e-21
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 48 6e-06
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 48 6e-06
At5g43500.2 68418.m05318 expressed protein 36 0.037
At5g43500.1 68418.m05319 expressed protein 36 0.037
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 30 1.4
At3g24130.1 68416.m03030 pectinesterase family protein contains ... 29 3.2
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 29 3.2
At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2 (... 29 3.2
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.2
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.2
At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1) c... 29 4.2
At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1) c... 29 4.2
At5g25280.2 68418.m02999 serine-rich protein-related contains so... 28 7.4
At5g25280.1 68418.m02998 serine-rich protein-related contains so... 28 7.4
At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I) i... 28 7.4
At3g63070.1 68416.m07084 PWWP domain-containing protein putative... 28 7.4
At3g04570.1 68416.m00485 DNA-binding protein-related contains Pf... 28 7.4
At1g73880.1 68414.m08556 UDP-glucoronosyl/UDP-glucosyl transfera... 28 7.4
At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1 (... 27 9.8
At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to b... 27 9.8
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 412 bits (1015), Expect = e-115
Identities = 191/204 (93%), Positives = 199/204 (97%)
Frame = +2
Query: 68 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 247
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 248 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
GILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 428 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 607
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 608 RDLTDYLMKILTERGYSFTTTAER 679
RDLTDYLMKILTERGYSFTT+AER
Sbjct: 185 RDLTDYLMKILTERGYSFTTSAER 208
Score = 34.3 bits (75), Expect = 0.085
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3
Query: 681 EIVRDIKEKLCYVALDFQ 734
EIVRD+KEKL Y+ALD++
Sbjct: 209 EIVRDVKEKLAYIALDYE 226
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 411 bits (1013), Expect = e-115
Identities = 191/204 (93%), Positives = 198/204 (97%)
Frame = +2
Query: 68 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 247
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 248 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 428 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 607
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 608 RDLTDYLMKILTERGYSFTTTAER 679
RDLTD+LMKILTERGYSFTTTAER
Sbjct: 185 RDLTDHLMKILTERGYSFTTTAER 208
Score = 34.3 bits (75), Expect = 0.085
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3
Query: 681 EIVRDIKEKLCYVALDFQ 734
EIVRD+KEKL Y+ALDF+
Sbjct: 209 EIVRDMKEKLSYIALDFE 226
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 411 bits (1013), Expect = e-115
Identities = 191/204 (93%), Positives = 198/204 (97%)
Frame = +2
Query: 68 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 247
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 248 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 428 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 607
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 608 RDLTDYLMKILTERGYSFTTTAER 679
RDLTD+LMKILTERGYSFTTTAER
Sbjct: 185 RDLTDHLMKILTERGYSFTTTAER 208
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3
Query: 681 EIVRDIKEKLCYVALDFQ 734
EIVRD+KEKL Y+ALD++
Sbjct: 209 EIVRDMKEKLSYIALDYE 226
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 409 bits (1008), Expect = e-115
Identities = 190/204 (93%), Positives = 197/204 (96%)
Frame = +2
Query: 68 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 247
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 248 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 428 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 607
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 608 RDLTDYLMKILTERGYSFTTTAER 679
RDLTD LMKILTERGYSFTTTAER
Sbjct: 185 RDLTDALMKILTERGYSFTTTAER 208
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +3
Query: 681 EIVRDIKEKLCYVALDFQ 734
EIVRDIKEKLCY+ALD++
Sbjct: 209 EIVRDIKEKLCYIALDYE 226
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 409 bits (1008), Expect = e-115
Identities = 190/204 (93%), Positives = 197/204 (96%)
Frame = +2
Query: 68 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 247
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 248 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 428 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 607
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 608 RDLTDYLMKILTERGYSFTTTAER 679
RDLTD LMKILTERGYSFTTTAER
Sbjct: 185 RDLTDALMKILTERGYSFTTTAER 208
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +3
Query: 681 EIVRDIKEKLCYVALDFQ 734
EIVRDIKEKLCY+ALD++
Sbjct: 209 EIVRDIKEKLCYIALDYE 226
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 408 bits (1004), Expect = e-114
Identities = 186/204 (91%), Positives = 197/204 (96%)
Frame = +2
Query: 68 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 247
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 248 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 428 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 607
MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAG
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAG 184
Query: 608 RDLTDYLMKILTERGYSFTTTAER 679
RDLTDYLMKILTERGY FTTTAER
Sbjct: 185 RDLTDYLMKILTERGYMFTTTAER 208
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3
Query: 681 EIVRDIKEKLCYVALDFQ 734
EIVRDIKEKL +VA+D++
Sbjct: 209 EIVRDIKEKLSFVAVDYE 226
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 408 bits (1004), Expect = e-114
Identities = 186/204 (91%), Positives = 197/204 (96%)
Frame = +2
Query: 68 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 247
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 248 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 428 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 607
MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAG
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAG 184
Query: 608 RDLTDYLMKILTERGYSFTTTAER 679
RDLTDYLMKILTERGY FTTTAER
Sbjct: 185 RDLTDYLMKILTERGYMFTTTAER 208
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3
Query: 681 EIVRDIKEKLCYVALDFQ 734
EIVRDIKEKL +VA+D++
Sbjct: 209 EIVRDIKEKLSFVAVDYE 226
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 408 bits (1004), Expect = e-114
Identities = 186/204 (91%), Positives = 197/204 (96%)
Frame = +2
Query: 68 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 247
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 248 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 428 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 607
MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAG
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAG 184
Query: 608 RDLTDYLMKILTERGYSFTTTAER 679
RDLTDYLMKILTERGY FTTTAER
Sbjct: 185 RDLTDYLMKILTERGYMFTTTAER 208
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3
Query: 681 EIVRDIKEKLCYVALDFQ 734
EIVRDIKEKL +VA+D++
Sbjct: 209 EIVRDIKEKLSFVAVDYE 226
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 407 bits (1002), Expect = e-114
Identities = 190/204 (93%), Positives = 196/204 (96%)
Frame = +2
Query: 68 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 247
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 248 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
GILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 428 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 607
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 608 RDLTDYLMKILTERGYSFTTTAER 679
RDLTD LMKILTERGY FTTTAER
Sbjct: 185 RDLTDSLMKILTERGYMFTTTAER 208
Score = 35.1 bits (77), Expect = 0.049
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +3
Query: 681 EIVRDIKEKLCYVALDFQ 734
EIVRDIKEKL YVALD++
Sbjct: 209 EIVRDIKEKLAYVALDYE 226
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 377 bits (927), Expect = e-105
Identities = 167/204 (81%), Positives = 192/204 (94%)
Frame = +2
Query: 68 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 247
D+ A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 248 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
GIL+LKYPIEHG+++NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 428 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 607
MFE+F P+MY+ IQAVLSLY+SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 126 MFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 185
Query: 608 RDLTDYLMKILTERGYSFTTTAER 679
RDLT+YL KI+ ERGY++TT+AER
Sbjct: 186 RDLTEYLTKIMMERGYTYTTSAER 209
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/18 (77%), Positives = 18/18 (100%)
Frame = +3
Query: 681 EIVRDIKEKLCYVALDFQ 734
EIVRDIKEKLCY+A+D++
Sbjct: 210 EIVRDIKEKLCYIAVDYE 227
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 316 bits (775), Expect = 1e-86
Identities = 143/199 (71%), Positives = 170/199 (85%)
Frame = +2
Query: 83 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 262
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 263 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 442
K P+EHGI+ NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 443 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 622
+ PAMYV++Q+VL LY+SGRTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTD
Sbjct: 119 DVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTD 178
Query: 623 YLMKILTERGYSFTTTAER 679
YL++I+TERGY++TT+AER
Sbjct: 179 YLIEIMTERGYTYTTSAER 197
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +3
Query: 681 EIVRDIKEKLCYVALDFQ 734
EIVRDIKEKLCYVALD++
Sbjct: 198 EIVRDIKEKLCYVALDYE 215
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 272 bits (666), Expect = 2e-73
Identities = 125/163 (76%), Positives = 146/163 (89%)
Frame = +2
Query: 191 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 370
MVGM + D +VGD+A+++ GILTL YP+EHG+++NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 371 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 550
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VLDSGDGVS+ V
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIV 120
Query: 551 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 679
PIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY T+AER
Sbjct: 121 PIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY---TSAER 160
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +3
Query: 681 EIVRDIKEKLCYVALDFQ 734
E+VRDIKE+ Y+ALD++
Sbjct: 161 EVVRDIKEQFGYIALDYE 178
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 225 bits (550), Expect = 2e-59
Identities = 98/205 (47%), Positives = 141/205 (68%), Gaps = 2/205 (0%)
Frame = +2
Query: 68 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQS 241
D+ +V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 2 DNKNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSE 61
Query: 242 KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 421
R L + YP+ +GI+ NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM
Sbjct: 62 LRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMI 121
Query: 422 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 601
+ MFE +N +++ IQAVL+LYA G TG+V+DSGDGV+H VP+ +GY+ PH R+++
Sbjct: 122 ETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNV 181
Query: 602 AGRDLTDYLMKILTERGYSFTTTAE 676
AGR +T YL+ +L+ RGY+ TA+
Sbjct: 182 AGRHITAYLVDLLSRRGYAMNKTAD 206
Score = 31.1 bits (67), Expect = 0.79
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +3
Query: 681 EIVRDIKEKLCYVALDFQ 734
E VR+IKEKLCY++ D++
Sbjct: 208 ETVREIKEKLCYISYDYK 225
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 161 bits (390), Expect = 6e-40
Identities = 86/217 (39%), Positives = 128/217 (58%), Gaps = 22/217 (10%)
Frame = +2
Query: 68 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 217
D+V+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 218 -----------YVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEE 361
YVG +A S +R + + PI+ GI+++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 362 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 541
HP+LL E PLN + REK ++MFE + PA+++A VL+ +A+GR T +V+D G G +
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGST 184
Query: 542 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 652
P+++GY L A++ L G LTD L+K L +G
Sbjct: 185 TISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKG 221
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 158 bits (384), Expect = 3e-39
Identities = 88/217 (40%), Positives = 128/217 (58%), Gaps = 26/217 (11%)
Frame = +2
Query: 80 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 205
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 206 QKDSYVGDEAQSK-RGILT--LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 376
D Y+GDEA +K R T L YPIEHG + +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 377 TEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVS 541
TE+PL P +RE +I+FETFN P +Y+A+ +VL+L A T TG+V+D GDG +
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGAT 184
Query: 542 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 652
H VP+ EGY + I + +AG+D+T ++ +++ ERG
Sbjct: 185 HVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERG 221
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 105 bits (252), Expect = 3e-23
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Frame = +2
Query: 83 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 262
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 263 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 442
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 443 NSPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAILR 592
++Y+A Q+++ LY + R +V+D G +H VP+ + L HAI R
Sbjct: 122 GFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKR 181
Query: 593 LDLAGRDLTDYLMKILTER 649
+DL G+ T+YL ++++ R
Sbjct: 182 IDLGGKAFTNYLKELVSYR 200
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 104 bits (249), Expect = 7e-23
Identities = 54/132 (40%), Positives = 79/132 (59%), Gaps = 16/132 (12%)
Frame = +2
Query: 68 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 202
D+V+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 203 GQKDSYVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 379
G++ Y G +A + +R + + P + GI+T+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 380 EAPLNPKANREK 415
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 103 bits (247), Expect = 1e-22
Identities = 72/182 (39%), Positives = 93/182 (51%), Gaps = 2/182 (1%)
Frame = +2
Query: 80 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 256
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 257 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 433
TL PIE G+I +WD ME + + Y L E +L T+ PKA RE++ Q+MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 434 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 613
ETFN Y + QAVLSLYA GR +G +D G G P+ EG A R +L G +
Sbjct: 113 ETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTE 172
Query: 614 LT 619
LT
Sbjct: 173 LT 174
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 98.3 bits (234), Expect = 5e-21
Identities = 60/198 (30%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Frame = +2
Query: 83 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 262
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 263 -----KYPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQ 424
+ P + ++ ++ ME I + F + +HP+L+TE NP +R KM +
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 425 IMFETFNSPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 589
++FET+ PA+ + A S L+ + GIVL G +H++P +G +
Sbjct: 138 LLFETYGVPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSS 197
Query: 590 RLDLAGRDLTDYLMKILT 643
R ++ G +TDYL ++L+
Sbjct: 198 RTNIGGYHVTDYLKQLLS 215
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 48.0 bits (109), Expect = 6e-06
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Frame = +2
Query: 326 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 475
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 476 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 652
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 653 YSF 661
SF
Sbjct: 301 ISF 303
Score = 31.1 bits (67), Expect = 0.79
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3
Query: 687 VRDIKEKLCYVALDFQ 734
VR +KEKLCYVALD++
Sbjct: 309 VRTLKEKLCYVALDYK 324
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 48.0 bits (109), Expect = 6e-06
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Frame = +2
Query: 326 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 475
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 476 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 652
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 653 YSF 661
SF
Sbjct: 301 ISF 303
Score = 31.1 bits (67), Expect = 0.79
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3
Query: 687 VRDIKEKLCYVALDFQ 734
VR +KEKLCYVALD++
Sbjct: 309 VRTLKEKLCYVALDYK 324
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 35.5 bits (78), Expect = 0.037
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +2
Query: 362 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 541
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 238 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 296
Query: 542 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 637
V + +G +LP+ L G D+ L+ I
Sbjct: 297 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 35.5 bits (78), Expect = 0.037
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +2
Query: 362 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 541
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 250 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 308
Query: 542 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 637
V + +G +LP+ L G D+ L+ I
Sbjct: 309 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 340
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +3
Query: 30 PQHKHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSWVA 173
P H+ S A + +MAP PVSP T+ PAP S V+
Sbjct: 181 PGGAHSPKSSSAVSPATSPPGSMAPKSGSPVSPTTSPPAPPKSTSPVS 228
>At3g24130.1 68416.m03030 pectinesterase family protein contains
Pfam profile: PF01095 Pectinesterase
Length = 335
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 676 LSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 548
L G G+R+T + D H V Q T ++ V +S+TF + Y
Sbjct: 86 LVGAGKRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSY 128
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 421 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPD 314
G+ + VG+G+ GG G+ GV +GG G P+
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGGGNPNSNPGSAPN 63
>At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2
(PLDALPHA2) (PLD2) / choline phosphatase 2 identical to
phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from
[Arabidopsis thaliana]
Length = 810
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -1
Query: 433 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 308
+HDL GHLL P+G+ EG E G DT+ + GV D +
Sbjct: 760 EHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYM 804
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 227 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 406
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 407 REK 415
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 227 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 406
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 407 REK 415
REK
Sbjct: 225 REK 227
>At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 544 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 660
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 544 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 660
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At5g25280.2 68418.m02999 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 1 SRCRRVNTSVPNTNTHKVQDVRRRCCCA 84
+R V+++ P+ N HK+ D RRRC C+
Sbjct: 103 NRSIAVSSNKPS-NHHKIPDSRRRCMCS 129
>At5g25280.1 68418.m02998 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 1 SRCRRVNTSVPNTNTHKVQDVRRRCCCA 84
+R V+++ P+ N HK+ D RRRC C+
Sbjct: 103 NRSIAVSSNKPS-NHHKIPDSRRRCMCS 129
>At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I)
identical to P II nitrogen sensing protein GLB I
(GI:7268574) [Arabidopsis thaliana]; similar to nitrogen
regulatory protein P-II (PII signal transducing protein)
(SP:O30794) {Nostoc punctiforme}
Length = 196
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -2
Query: 564 PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATY-MAGELKVSNMIWVIFSLLALGLR 388
PS + V ++PS S +PVV + S+ Y + ++ + V +LL +G+R
Sbjct: 40 PSCLDLVTKSPSNNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIR 99
Query: 387 GASVSST---GCSSGAT 346
G +VS G G+T
Sbjct: 100 GVTVSDVRGFGAQGGST 116
>At3g63070.1 68416.m07084 PWWP domain-containing protein putative
transcription factor HUA2, Arabidopsis thaliana,
EMBL:AF116556
Length = 1347
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 583 HPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGK 684
HPPS G DR H+ PH+ HHR G+
Sbjct: 1274 HPPSSHGPRYHDR--HKGPHQSSSYSGHHRDSGR 1305
>At3g04570.1 68416.m00485 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 315
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -2
Query: 186 PWWRGRPTMDG--KTARGASSPAKPALHM 106
PWW G+ + G T G+S KP LH+
Sbjct: 4 PWWTGQVNLSGLETTPPGSSQLKKPDLHI 32
>At1g73880.1 68414.m08556 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 473
Score = 27.9 bits (59), Expect = 7.4
Identities = 37/125 (29%), Positives = 50/125 (40%), Gaps = 7/125 (5%)
Frame = -1
Query: 382 FGEQHGVLLGGDTQLIVEGVVPDLLHVI-----PVGDDTVLDGVLQSEDTSLA-LGLVTH 221
FG Q VL T + G+ +H I PV D+ +L D +A GLV
Sbjct: 287 FGSQV-VLTKEQTLALASGLEKSGVHFIWAVKEPVEKDSTRGNILDGFDDRVAGRGLVIR 345
Query: 220 VGV-FLAHTDHHALVARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVVAHLELCV 44
+A H A+ A TH G VVAG L Y +++VV L++ V
Sbjct: 346 GWAPQVAVLRHRAVGAFLTHCGWNSVVEAVVAGVLMLTWPMRADQYTDASLVVDELKVGV 405
Query: 43 CLCWG 29
C G
Sbjct: 406 RACEG 410
>At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1
(PLDALPHA1) (PLD1) / choline phosphatase 1 identical to
SP:Q38882 Phospholipase D alpha 1 (EC 3.1.4.4)
(AtPLDalpha1) (PLD alpha 1) (Choline phosphatase 1)
(Phosphatidylcholine-hydrolyzing phospholipase D 1)
(PLDalpha) [Arabidopsis thaliana]
Length = 810
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 433 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 308
+HDL GHLL P+G+ EG E G DT+ + G D L
Sbjct: 760 EHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGTKSDYL 804
>At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to
beta-1,3-glucanase-like protein (GI:14279169) [Olea
europaea] similar to Glucan endo-1,3-beta-glucosidase
precursor (EC 3.2.1.39) ((1-3)-beta- glucan
endohydrolase) ((1-3)-beta-glucanase) (Beta-1,3-
endoglucanase) (Swiss-Prot:P52409) [Triticum aestivum]
Length = 197
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 90 STMAPACARPVSPATTRPAPSSRP 161
S +A C P SP++TR PS+ P
Sbjct: 98 SNLANGCIYPSSPSSTRSPPSTTP 121
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,784,957
Number of Sequences: 28952
Number of extensions: 341769
Number of successful extensions: 1284
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1614253080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -