Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31361
(491 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1738 - 29141829-29141989,29142112-29142343,29142751-291427... 41 5e-04
05_05_0309 - 23987669-23988042,23989485-23989560 41 5e-04
03_02_0817 + 11492699-11492774,11493605-11493978 41 5e-04
01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097 41 5e-04
12_02_1027 + 25496311-25496811 39 0.003
01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858 38 0.004
01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651 38 0.006
11_01_0203 - 1610086-1610192,1610620-1610669,1610888-1611348 37 0.010
03_05_1166 - 30876802-30876899,30877233-30878685 32 0.22
08_01_0121 - 963297-963743 31 0.50
03_06_0014 - 31012116-31012229,31012773-31012985,31013058-310131... 30 1.2
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 30 1.2
03_03_0278 - 16126803-16129049 29 2.0
02_01_0282 + 1882844-1883413,1883519-1883644,1883733-1883930,188... 28 3.5
03_05_1060 - 30023407-30023553,30024274-30024390,30024958-300251... 27 6.2
>07_03_1738 -
29141829-29141989,29142112-29142343,29142751-29142792,
29143312-29143410,29143575-29143667,29143742-29143876,
29144251-29144290,29144475-29144844,29146575-29146650
Length = 415
Score = 41.1 bits (92), Expect = 5e-04
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +3
Query: 15 AELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 155
AEL H + LGEKL D EV E+ ++ D DG I Y F+K +MA
Sbjct: 104 AELRHVMTNLGEKLTDEEVDEMIREA--DVDGDGQINYEEFVKVMMA 148
>05_05_0309 - 23987669-23988042,23989485-23989560
Length = 149
Score = 41.1 bits (92), Expect = 5e-04
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +3
Query: 15 AELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 155
AEL H + LGEKL D EV E+ ++ D DG I Y F+K +MA
Sbjct: 104 AELRHVMTNLGEKLTDEEVDEMIREA--DVDGDGQINYEEFVKVMMA 148
>03_02_0817 + 11492699-11492774,11493605-11493978
Length = 149
Score = 41.1 bits (92), Expect = 5e-04
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +3
Query: 15 AELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 155
AEL H + LGEKL D EV E+ ++ D DG I Y F+K +MA
Sbjct: 104 AELRHVMTNLGEKLTDEEVDEMIREA--DVDGDGQINYEEFVKVMMA 148
>01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097
Length = 171
Score = 41.1 bits (92), Expect = 5e-04
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +3
Query: 15 AELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 155
AEL H + LGEKL D EV E+ ++ D DG I Y F+K +MA
Sbjct: 104 AELRHVMTNLGEKLTDEEVEEMIREA--DVDGDGQINYDEFVKVMMA 148
>12_02_1027 + 25496311-25496811
Length = 166
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +3
Query: 3 LMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVM 152
L+ AEL H +++LGEKL D EV ++ ++ D DG + + F++ +M
Sbjct: 115 LISAAELRHVMISLGEKLTDEEVEQMIREA--DLDGDGQVNFDEFVRMMM 162
>01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858
Length = 146
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +3
Query: 15 AELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 143
AEL H + LGEKL D EV E+ ++ D DG I Y F+K
Sbjct: 104 AELRHVMTNLGEKLTDEEVDEMIREA--DVDGDGQINYEEFVK 144
>01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651
Length = 187
Score = 37.5 bits (83), Expect = 0.006
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +3
Query: 18 ELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA*K 161
EL H + +GE+L D EV E+ + D DG I Y F+K +MA K
Sbjct: 105 ELRHVMANIGERLTDEEVGEMISEA--DVDGDGQINYEEFVKCMMAKK 150
>11_01_0203 - 1610086-1610192,1610620-1610669,1610888-1611348
Length = 205
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +3
Query: 18 ELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 155
EL H + LG+ L D E+A++ + D DG I Y FLK +MA
Sbjct: 110 ELRHVMANLGDPLSDDELADMLHEA--DSDGDGQINYNEFLKVMMA 153
>03_05_1166 - 30876802-30876899,30877233-30878685
Length = 516
Score = 32.3 bits (70), Expect = 0.22
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 313 WLRAPPEELSPPRALPAPVPQSRASVF*GPSHRTFVAGKDLITKD 179
+L PP+ SPP LP P P R ++ PS + K +K+
Sbjct: 210 YLWTPPKSSSPPTLLPPPPPPPREKMYPNPSGEPWHTRKPRFSKE 254
>08_01_0121 - 963297-963743
Length = 148
Score = 31.1 bits (67), Expect = 0.50
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +3
Query: 15 AELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 155
A+L H L ++GEKL+ E E ++ +D DG I Y F+++++A
Sbjct: 103 ADLRHVLTSIGEKLEPHEFDEWIRE-VDVA-PDGTIRYDDFIRRIVA 147
>03_06_0014 -
31012116-31012229,31012773-31012985,31013058-31013171,
31013909-31014040,31014624-31014692,31014763-31015017,
31015347-31015520,31016104-31016280,31016999-31017107,
31017343-31017506,31018221-31018517
Length = 605
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 12 GAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 134
G + T+ + ++ E EV D D D+DG+ PY +
Sbjct: 142 GGHVKRTITSETRSTENEEDHEVLHDAFDDNDEDGLAPYGS 182
>02_01_0075 -
522554-522616,522742-522748,523033-523136,523237-523368,
525209-525401,525978-526330,526693-526791,526864-526935,
527062-527213,527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,529370-529450,
530170-530271,530345-530440,531437-531444,531575-531616,
531830-531894,534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 325 GSAGWLRAPPEELSPPRALPAPVPQSRASVF*GPS 221
G A +PP PPR L +P+P+SRA PS
Sbjct: 3 GLAAADNSPPVAAPPPRRLSSPLPRSRAPPSPSPS 37
>03_03_0278 - 16126803-16129049
Length = 748
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +3
Query: 102 EDDDGMIPYAAFLKKVMA*KTSQLVISLV 188
+D+DGM Y AF++KV++ + QL IS +
Sbjct: 535 DDEDGMPRYYAFIQKVLSLEPFQLKISFL 563
>02_01_0282 + 1882844-1883413,1883519-1883644,1883733-1883930,
1884442-1884666,1884844-1885224,1885282-1885989,
1886546-1886839,1887211-1887709,1887949-1888721
Length = 1257
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 60 DSEVAEVTKDCMDPEDDDGMIPYAAF 137
D + AEVTKD D +D DGM A F
Sbjct: 931 DGDGAEVTKDGDDSDDSDGMDDDAMF 956
>03_05_1060 -
30023407-30023553,30024274-30024390,30024958-30025129,
30026116-30026198,30026299-30026917,30027157-30027280,
30027637-30027745,30028214-30028399,30028716-30028763,
30028808-30028979,30029034-30029209
Length = 650
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 328 AGSAGWLRAPPEELSPPRALPAPVPQSRA 242
AG AG L E +P ALP P P + A
Sbjct: 418 AGDAGVLHGKAHEGAPSMALPPPAPSAAA 446
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,488,373
Number of Sequences: 37544
Number of extensions: 212467
Number of successful extensions: 956
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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