Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31360
(528 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623... 135 2e-32
04_04_0417 - 25052305-25052398,25052583-25052672,25052740-250529... 127 6e-30
07_03_0920 - 22603868-22603964,22604110-22604222,22604281-226044... 125 3e-29
04_04_1134 + 31137326-31137337,31137964-31138004,31138089-311381... 125 3e-29
04_04_1135 + 31140032-31140043,31140552-31140592,31140680-311407... 113 1e-25
07_03_0919 - 22594980-22595111,22595398-22595427,22595522-225955... 71 8e-13
08_02_0383 - 16539472-16539633,16543044-16543205 44 6e-05
04_04_1693 + 35404336-35404515,35405732-35406019,35406189-354062... 37 0.012
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 32 0.33
06_01_0747 - 5587261-5587356,5587472-5587855,5588133-5588192,558... 31 0.76
11_06_0289 - 21969248-21973516 28 5.3
11_06_0185 + 21018045-21022307 28 5.3
03_05_0248 + 22348504-22348568,22349064-22349371,22349476-223500... 28 5.3
03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,352... 27 9.3
>08_01_0706 -
6235817-6235988,6236028-6236338,6236421-6236627,
6236718-6236889,6236994-6237249,6238015-6238073,
6238693-6238782,6238869-6239013,6239598-6239712,
6240690-6240701
Length = 512
Score = 135 bits (327), Expect = 2e-32
Identities = 60/101 (59%), Positives = 75/101 (74%)
Frame = +1
Query: 103 KLPERRLRVPTLTRKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEK 282
K P + + +KCPFTG VSIRGRI+ G KM RTI++RR+YLH++ KY R+EK
Sbjct: 35 KTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEK 94
Query: 283 RHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 405
RH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFNV+KV
Sbjct: 95 RHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVIKV 134
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +3
Query: 84 NVGLGFKTPREAIEGTYIDKE 146
N+GLGFKTPREAIEGTYIDK+
Sbjct: 29 NIGLGFKTPREAIEGTYIDKK 49
>04_04_0417 -
25052305-25052398,25052583-25052672,25052740-25052905,
25053547-25053647,25053735-25053775,25054170-25054181
Length = 167
Score = 127 bits (306), Expect = 6e-30
Identities = 61/108 (56%), Positives = 75/108 (69%), Gaps = 7/108 (6%)
Frame = +1
Query: 103 KLPERRLRVPTLTRKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNR--- 273
K P + + +KCPFTG VSIRGRI+ G KM RTI++RR+YLH++ KY R
Sbjct: 44 KTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVN 103
Query: 274 ----FEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 405
+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 104 LVAGYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 150
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +3
Query: 84 NVGLGFKTPREAIEGTYIDKE 146
N+GLGFKTPREAIEGTYIDK+
Sbjct: 38 NIGLGFKTPREAIEGTYIDKK 58
>07_03_0920 -
22603868-22603964,22604110-22604222,22604281-22604429,
22604732-22604832,22604917-22604957,22605584-22605595
Length = 170
Score = 125 bits (301), Expect = 3e-29
Identities = 61/110 (55%), Positives = 75/110 (68%), Gaps = 9/110 (8%)
Frame = +1
Query: 103 KLPERRLRVPTLTRKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN---- 270
K P + + +KCPFTG VSIRGRI+ G KM RTI++RR+YLH++ KY
Sbjct: 44 KTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGA 103
Query: 271 -----RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 405
R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 104 NLPPCRYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 152
Score = 44.4 bits (100), Expect = 6e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 84 NVGLGFKTPREAIEGTYIDKE 146
++GLGFKTPREAIEGTYIDK+
Sbjct: 38 SIGLGFKTPREAIEGTYIDKK 58
>04_04_1134 +
31137326-31137337,31137964-31138004,31138089-31138189,
31138489-31138637,31138696-31138808,31138954-31139050
Length = 170
Score = 125 bits (301), Expect = 3e-29
Identities = 61/110 (55%), Positives = 75/110 (68%), Gaps = 9/110 (8%)
Frame = +1
Query: 103 KLPERRLRVPTLTRKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN---- 270
K P + + +KCPFTG VSIRGRI+ G KM RTI++RR+YLH++ KY
Sbjct: 44 KTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGA 103
Query: 271 -----RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 405
R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 104 NLPPCRYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 152
Score = 44.4 bits (100), Expect = 6e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 84 NVGLGFKTPREAIEGTYIDKE 146
++GLGFKTPREAIEGTYIDK+
Sbjct: 38 SIGLGFKTPREAIEGTYIDKK 58
>04_04_1135 +
31140032-31140043,31140552-31140592,31140680-31140780,
31141113-31141419,31141565-31141661
Length = 185
Score = 113 bits (271), Expect = 1e-25
Identities = 61/125 (48%), Positives = 75/125 (60%), Gaps = 24/125 (19%)
Frame = +1
Query: 103 KLPERRLRVPTLTRKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNR--- 273
K P + + +KCPFTG VSIRGRI+ G KM RTI++RR+YLH++ KY R
Sbjct: 44 KTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVN 103
Query: 274 ---------------------FEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 390
+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRF
Sbjct: 104 NYGFYLCFFSFFFPISDLGCRYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRF 162
Query: 391 NVLKV 405
NVLKV
Sbjct: 163 NVLKV 167
Score = 44.4 bits (100), Expect = 6e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 84 NVGLGFKTPREAIEGTYIDKE 146
++GLGFKTPREAIEGTYIDK+
Sbjct: 38 SIGLGFKTPREAIEGTYIDKK 58
>07_03_0919 -
22594980-22595111,22595398-22595427,22595522-22595587,
22596021-22596107,22596868-22596921,22597696-22597762,
22598099-22598215,22598536-22598637,22598784-22598902,
22598966-22599049,22599220-22599354,22599470-22599505,
22599581-22599700,22600557-22600645,22601507-22601596,
22601629-22601802,22602135-22602235,22602323-22602363,
22602872-22602883
Length = 551
Score = 70.5 bits (165), Expect = 8e-13
Identities = 29/57 (50%), Positives = 38/57 (66%)
Frame = +1
Query: 103 KLPERRLRVPTLTRKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNR 273
K P + + +KCPFTG VSIRGRI+ G KM RTI++RR+YLH++ KY R
Sbjct: 44 KTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQR 100
Score = 44.4 bits (100), Expect = 6e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 84 NVGLGFKTPREAIEGTYIDKE 146
++GLGFKTPREAIEGTYIDK+
Sbjct: 38 SIGLGFKTPREAIEGTYIDKK 58
>08_02_0383 - 16539472-16539633,16543044-16543205
Length = 107
Score = 44.4 bits (100), Expect = 6e-05
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +1
Query: 187 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 366
+ G+V KMQ+++V+ D L + YNR+ KR H D IGD V + R
Sbjct: 4 VVGIVVSNKMQKSVVVAVDRLFHHKMYNRYVKRTSKFMAHDET--EDCNIGDRVKLDPSR 61
Query: 367 PLSKTVRFNVLKV 405
PLSK + V ++
Sbjct: 62 PLSKRKHWVVAEI 74
>04_04_1693 + 35404336-35404515,35405732-35406019,35406189-35406278,
35406487-35406564,35406638-35406718,35407300-35407350,
35407788-35407933,35408169-35408235,35408328-35408387,
35408472-35408501,35408776-35408835,35408936-35409052,
35409790-35409903,35410068-35410166,35410572-35410697,
35410774-35410848,35410958-35411029,35411167-35411277,
35411760-35411843,35413149-35413256,35414207-35414308,
35414393-35414455,35414524-35414598,35414901-35414972,
35415063-35415187,35415251-35415302,35415380-35415448,
35415525-35415540,35415941-35415989,35416607-35417180
Length = 1077
Score = 36.7 bits (81), Expect = 0.012
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = +1
Query: 187 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 366
LTG V K +T+ + L PKY R E+ + H P ++GD+V + R
Sbjct: 972 LTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DPD-NQFKVGDVVELRRSR 1029
Query: 367 PLSKTVRF 390
P+SKT F
Sbjct: 1030 PISKTKHF 1037
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 31.9 bits (69), Expect = 0.33
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 376 WTKVCIRRSLQYHQSPRP*SKATNARTYSCAVSRTY 269
W C RR Y +SP P + R+YS + SR+Y
Sbjct: 129 WKNRCYRRGRSYSRSPSPRRGRSRGRSYSRSRSRSY 164
>06_01_0747 -
5587261-5587356,5587472-5587855,5588133-5588192,
5588428-5588484,5588663-5588800,5588901-5588966,
5589234-5589452,5589522-5589737,5589813-5589884,
5589952-5590205,5590356-5590525,5590840-5591029,
5592211-5592331,5592838-5592921,5593003-5593365,
5594530-5594724,5594938-5595933,5596329-5596370
Length = 1240
Score = 30.7 bits (66), Expect = 0.76
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 103 KLPERRLRVPTLTRKCPFTGNVSIRGRILTG 195
KL + +RVP++ KC G+++++G + TG
Sbjct: 576 KLLQNTIRVPSVQEKCSKEGSLALQGTVFTG 606
>11_06_0289 - 21969248-21973516
Length = 1422
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 199 VQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 333
++KM + T + +H LPK+ E + LS CF +VE
Sbjct: 1251 LEKMVLSSTCIESISGVHGLPKFEELELNSSSCGRLLSSCFYNVE 1295
>11_06_0185 + 21018045-21022307
Length = 1420
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 199 VQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 333
++KM + T + +H LPK+ E + LS CF +VE
Sbjct: 1249 LEKMVLSSTCIESISGVHGLPKFEELELNSSSCGRLLSSCFYNVE 1293
>03_05_0248 +
22348504-22348568,22349064-22349371,22349476-22350039,
22350082-22350128,22351244-22351715,22352349-22352611
Length = 572
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 151 PFTGNVSIRGRILTGVVQKM-KMQRTIVIRRDYLHYLPKY 267
PFTG++S G + + KM + +V +DYLH K+
Sbjct: 471 PFTGDMSQSGDAIVAALMKMLAINPHLVTDKDYLHTAMKH 510
>03_01_0458 -
3521938-3522024,3522133-3522213,3522673-3522806,
3523189-3523270,3523420-3523692,3523953-3524162,
3524252-3524337,3525197-3525289,3526003-3526227,
3526320-3526930,3529328-3529395,3529491-3529679,
3529773-3529901,3530013-3532484
Length = 1579
Score = 27.1 bits (57), Expect = 9.3
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = -2
Query: 197 TPVRMRPRIETLPVKGHFLVNVGTLNRLSGSFEA*TNITYGDACPSSSCHLSCSGKR 27
TP R IE + + L+ N S S + + GD PSSSC S SG R
Sbjct: 243 TPEERRKEIE-VRLAAMRLMEQQKHNATSASSSTSQSQSPGDEAPSSSCQSSVSGHR 298
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,239,379
Number of Sequences: 37544
Number of extensions: 274151
Number of successful extensions: 592
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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