Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31360
(528 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ... 181 1e-45
BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. 181 1e-45
BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 p... 181 1e-45
BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 p... 181 1e-45
BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 p... 181 1e-45
BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. 181 1e-45
BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 p... 181 1e-45
BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 p... 181 1e-45
AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 p... 181 1e-45
AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11 p... 142 7e-34
AY259177-1|AAP22073.1| 293|Homo sapiens iodotyrosine dehalogena... 30 4.4
>X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for
ribosomal protein S11. ).
Length = 158
Score = 181 bits (441), Expect = 1e-45
Identities = 82/101 (81%), Positives = 91/101 (90%)
Frame = +1
Query: 103 KLPERRLRVPTLTRKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEK 282
K P+ + + +KCPFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEK
Sbjct: 45 KTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEK 104
Query: 283 RHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 405
RH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 105 RHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
Score = 45.2 bits (102), Expect = 1e-04
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 84 NVGLGFKTPREAIEGTYIDKE 146
N+GLGFKTP+EAIEGTYIDK+
Sbjct: 39 NIGLGFKTPKEAIEGTYIDKK 59
>BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 181 bits (441), Expect = 1e-45
Identities = 82/101 (81%), Positives = 91/101 (90%)
Frame = +1
Query: 103 KLPERRLRVPTLTRKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEK 282
K P+ + + +KCPFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEK
Sbjct: 45 KTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEK 104
Query: 283 RHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 405
RH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 105 RHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
Score = 45.2 bits (102), Expect = 1e-04
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 84 NVGLGFKTPREAIEGTYIDKE 146
N+GLGFKTP+EAIEGTYIDK+
Sbjct: 39 NIGLGFKTPKEAIEGTYIDKK 59
>BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 181 bits (441), Expect = 1e-45
Identities = 82/101 (81%), Positives = 91/101 (90%)
Frame = +1
Query: 103 KLPERRLRVPTLTRKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEK 282
K P+ + + +KCPFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEK
Sbjct: 45 KTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEK 104
Query: 283 RHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 405
RH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 105 RHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
Score = 45.2 bits (102), Expect = 1e-04
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 84 NVGLGFKTPREAIEGTYIDKE 146
N+GLGFKTP+EAIEGTYIDK+
Sbjct: 39 NIGLGFKTPKEAIEGTYIDKK 59
>BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 181 bits (441), Expect = 1e-45
Identities = 82/101 (81%), Positives = 91/101 (90%)
Frame = +1
Query: 103 KLPERRLRVPTLTRKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEK 282
K P+ + + +KCPFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEK
Sbjct: 45 KTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEK 104
Query: 283 RHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 405
RH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 105 RHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
Score = 45.2 bits (102), Expect = 1e-04
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 84 NVGLGFKTPREAIEGTYIDKE 146
N+GLGFKTP+EAIEGTYIDK+
Sbjct: 39 NIGLGFKTPKEAIEGTYIDKK 59
>BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 181 bits (441), Expect = 1e-45
Identities = 82/101 (81%), Positives = 91/101 (90%)
Frame = +1
Query: 103 KLPERRLRVPTLTRKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEK 282
K P+ + + +KCPFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEK
Sbjct: 45 KTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEK 104
Query: 283 RHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 405
RH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 105 RHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
Score = 45.2 bits (102), Expect = 1e-04
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 84 NVGLGFKTPREAIEGTYIDKE 146
N+GLGFKTP+EAIEGTYIDK+
Sbjct: 39 NIGLGFKTPKEAIEGTYIDKK 59
>BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 181 bits (441), Expect = 1e-45
Identities = 82/101 (81%), Positives = 91/101 (90%)
Frame = +1
Query: 103 KLPERRLRVPTLTRKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEK 282
K P+ + + +KCPFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEK
Sbjct: 45 KTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEK 104
Query: 283 RHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 405
RH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 105 RHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
Score = 45.2 bits (102), Expect = 1e-04
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 84 NVGLGFKTPREAIEGTYIDKE 146
N+GLGFKTP+EAIEGTYIDK+
Sbjct: 39 NIGLGFKTPKEAIEGTYIDKK 59
>BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 181 bits (441), Expect = 1e-45
Identities = 82/101 (81%), Positives = 91/101 (90%)
Frame = +1
Query: 103 KLPERRLRVPTLTRKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEK 282
K P+ + + +KCPFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEK
Sbjct: 45 KTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEK 104
Query: 283 RHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 405
RH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 105 RHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
Score = 45.2 bits (102), Expect = 1e-04
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 84 NVGLGFKTPREAIEGTYIDKE 146
N+GLGFKTP+EAIEGTYIDK+
Sbjct: 39 NIGLGFKTPKEAIEGTYIDKK 59
>BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 181 bits (441), Expect = 1e-45
Identities = 82/101 (81%), Positives = 91/101 (90%)
Frame = +1
Query: 103 KLPERRLRVPTLTRKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEK 282
K P+ + + +KCPFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEK
Sbjct: 45 KTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEK 104
Query: 283 RHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 405
RH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 105 RHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
Score = 45.2 bits (102), Expect = 1e-04
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 84 NVGLGFKTPREAIEGTYIDKE 146
N+GLGFKTP+EAIEGTYIDK+
Sbjct: 39 NIGLGFKTPKEAIEGTYIDKK 59
>AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 181 bits (441), Expect = 1e-45
Identities = 82/101 (81%), Positives = 91/101 (90%)
Frame = +1
Query: 103 KLPERRLRVPTLTRKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEK 282
K P+ + + +KCPFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEK
Sbjct: 45 KTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEK 104
Query: 283 RHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 405
RH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 105 RHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
Score = 45.2 bits (102), Expect = 1e-04
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 84 NVGLGFKTPREAIEGTYIDKE 146
N+GLGFKTP+EAIEGTYIDK+
Sbjct: 39 NIGLGFKTPKEAIEGTYIDKK 59
>AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11
protein.
Length = 83
Score = 142 bits (344), Expect = 7e-34
Identities = 64/70 (91%), Positives = 68/70 (97%)
Frame = +1
Query: 196 VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLS 375
VV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLS
Sbjct: 1 VVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLS 60
Query: 376 KTVRFNVLKV 405
KTVRFNVLKV
Sbjct: 61 KTVRFNVLKV 70
>AY259177-1|AAP22073.1| 293|Homo sapiens iodotyrosine dehalogenase
1 isoform B protein protein.
Length = 293
Score = 30.3 bits (65), Expect = 4.4
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = -1
Query: 243 IAADHDSSLHLHFLNDAGEDAAADRNVTSEGTLPCQ---CRYPQSPLW 109
I H ++ H H + G + A ++S+G C+ C Y S LW
Sbjct: 234 ITMRHQTARHRHLIEGPGRSSEACSKLSSQGRPECRSGDCHYHSSQLW 281
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,254,979
Number of Sequences: 237096
Number of extensions: 1453805
Number of successful extensions: 2709
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2709
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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