Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31358
         (650 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    80   5e-14
UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ...    48   2e-04
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    46   0.001
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    40   0.052
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    38   0.28 
UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus tropicalis|...    36   0.84 
UniRef50_UPI0000DA1C3D Cluster: PREDICTED: similar to CCR4-NOT t...    33   4.5  
UniRef50_Q7N0G3 Cluster: Similarities with ribonuclease; n=1; Ph...    33   4.5  
UniRef50_Q8WXI7 Cluster: Mucin-16; n=23; cellular organisms|Rep:...    33   5.9  
UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subuni...    33   7.8  
UniRef50_A2D9Z7 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 79.8 bits (188), Expect = 5e-14
 Identities = 44/74 (59%), Positives = 48/74 (64%)
 Frame = -2

Query: 373 GAPTARRTNATTSFLTATILVYXXXXXXXXXXXTRLALQLFLVKIFKVYSFRLRGLVRVP 194
           G P AR  + TTSFLTA  L+Y           TRLALQ  LVK FKV SF+L+GL RV 
Sbjct: 30  GGPPARSQDPTTSFLTAATLIYAIGAGITAAAGTRLALQWILVKGFKVDSFQLQGLERVL 89

Query: 193 YRYFSSLPPRAGSG 152
           Y YFSSLPPR GSG
Sbjct: 90  YCYFSSLPPRVGSG 103


>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
           LRRG00114 - Rattus norvegicus (Rat)
          Length = 223

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = -2

Query: 139 LLPSLDVVAVSQAPSPESNPDSP 71
           LLPSLDVVAVSQAPSPE NPDSP
Sbjct: 167 LLPSLDVVAVSQAPSPELNPDSP 189


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 38/102 (37%), Positives = 49/102 (48%)
 Frame = -2

Query: 331 LTATILVYXXXXXXXXXXXTRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPRAGSG 152
           LTATIL+Y           TRLALQL   K+   +    +  +  PY   S         
Sbjct: 314 LTATILIYAIGAGITAAAGTRLALQLIFGKVLSSHHSNYKTKIW-PYIVIS--------- 363

Query: 151 *FARLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVAETTIES 26
                L  L++ A+SQAPSPESN +SPLPV  M+     I+S
Sbjct: 364 --CHYLSYLEL-AISQAPSPESNSNSPLPVKAMLGQYPNIKS 402


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 39.9 bits (89), Expect = 0.052
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = -1

Query: 209 PRKSPVSLFFVTTSPCREW 153
           PRKSPV LFFVTTSP REW
Sbjct: 24  PRKSPVLLFFVTTSPGREW 42


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 37.5 bits (83), Expect = 0.28
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = -2

Query: 172 PPRAGSG*FARLLPSLDVVAVSQAPSP 92
           PP+  SG  +RLL  +D+VA+SQAPSP
Sbjct: 46  PPKVSSGKVSRLLLPVDIVAISQAPSP 72



 Score = 34.3 bits (75), Expect = 2.6
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -1

Query: 299 SWNYRGCWHQTCP 261
           SWNYR CWHQT P
Sbjct: 7   SWNYRSCWHQTGP 19


>UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus
          tropicalis|Rep: Novel protein - Xenopus tropicalis
          (Western clawed frog) (Silurana tropicalis)
          Length = 118

 Score = 35.9 bits (79), Expect = 0.84
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +2

Query: 11 MSALSTFDGSFCDYHG 58
          MSALSTFDG+FC YHG
Sbjct: 1  MSALSTFDGTFCAYHG 16


>UniRef50_UPI0000DA1C3D Cluster: PREDICTED: similar to CCR4-NOT
           transcription complex, subunit 3; n=1; Rattus
           norvegicus|Rep: PREDICTED: similar to CCR4-NOT
           transcription complex, subunit 3 - Rattus norvegicus
          Length = 750

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = -2

Query: 181 SSLPPRAGSG*FARLLPSLDVVAVSQAPSPESNPDSPLP 65
           +++P   G G  A   P L + A S  PSPE  PD+PLP
Sbjct: 607 AAIPTGHGRGRLAPHAPPLXLRAHSAVPSPEPLPDTPLP 645


>UniRef50_Q7N0G3 Cluster: Similarities with ribonuclease; n=1;
           Photorhabdus luminescens subsp. laumondii|Rep:
           Similarities with ribonuclease - Photorhabdus
           luminescens subsp. laumondii
          Length = 272

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = -1

Query: 419 SPTICSANVSVSPRMRCTDSAAH-KCNYELFNRNNFSIRYWSWNYRGCWHQTC 264
           SP  C        R++ ++  A  +  YE F    FS   +SW   G W QTC
Sbjct: 92  SPAFCKGKAKNIERLKKSNKLAEAQREYEKFELQCFSENKFSWVIHGLWAQTC 144


>UniRef50_Q8WXI7 Cluster: Mucin-16; n=23; cellular organisms|Rep:
            Mucin-16 - Homo sapiens (Human)
          Length = 22152

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = -2

Query: 187  YFSSLPPRAGSG*FARLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVA 44
            + ++ P    S  F+ + PS+   +   + SPES P SPLPVT ++ +
Sbjct: 5621 WMTTPPVEETSSGFSLMSPSMTSPSPVSSTSPESIPSSPLPVTALLTS 5668


>UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subunit
           p20; n=1; Polaromonas naphthalenivorans CJ2|Rep:
           Peptidase C14, caspase catalytic subunit p20 -
           Polaromonas naphthalenivorans (strain CJ2)
          Length = 562

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -1

Query: 395 VSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWS 297
           V+  PR+R  D AA + NY L NR+N+ +  W+
Sbjct: 163 VNAPPRVRAADPAAVQANY-LANRSNYEVSQWT 194


>UniRef50_A2D9Z7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 872

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -2

Query: 136 LPSLDVVAVSQAPSPESNPDSPLPVTTMVVAETTIES**GRHLKD 2
           +PSL  V++SQ   P+  P +PLP    +++E   E   G  + D
Sbjct: 67  IPSLPPVSISQTIKPQIIPQNPLPTMNHIISEPLDEPASGEEMAD 111


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,241,987
Number of Sequences: 1657284
Number of extensions: 13648850
Number of successful extensions: 34642
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 33238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34627
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)