Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31358
         (650 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_01_0019 + 403078-404211                                             31   1.1  
12_01_0861 + 8153108-8153266,8154633-8155136                           29   2.4  
01_05_0005 - 16886553-16886946,16887079-16887404                       28   7.4  
03_06_0399 - 33632811-33633107,33633236-33633385,33633705-336340...    27   9.8  
03_03_0090 + 14367033-14367279,14367402-14368205,14368314-143700...    27   9.8  

>09_01_0019 + 403078-404211
          Length = 377

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +3

Query: 72  GESGFDSGEGA*ETATTSKEGSRRANYPLPARGGSDEK*RYG 197
           G S  DSG GA ++A   K  SRR  +      GSD   R+G
Sbjct: 321 GASDGDSGSGASDSADDRKRSSRRRRHRKSESSGSDGDERHG 362


>12_01_0861 + 8153108-8153266,8154633-8155136
          Length = 220

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = -2

Query: 196 PYRYFSSLPPRAGSG*FARLLPSLDVVAVSQAPSPESNP--DSPLPVTTMVVAE 41
           P    SS  P    G   RL  S  +VA+ + P P S+P  D P   TT+ + E
Sbjct: 94  PRSLLSSPSPHCQEGHDPRLCVSAGLVAIPRCPPPTSSPSLDPPESSTTVALIE 147


>01_05_0005 - 16886553-16886946,16887079-16887404
          Length = 239

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 326 RNNFSIRYWSWNYRGC 279
           R+N S RYW W   GC
Sbjct: 90  RSNSSFRYWRWQPHGC 105


>03_06_0399 -
           33632811-33633107,33633236-33633385,33633705-33634029,
           33635315-33635982,33636967-33637212,33637405-33637545,
           33637807-33637856,33637943-33638060,33638304-33638910,
           33639339-33639463,33639813-33639869,33639952-33640023,
           33640100-33640232,33640305-33640428,33640522-33640576,
           33640672-33641322
          Length = 1272

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 133 PSLDVVAVSQAPSPESNPDSPLP 65
           P LD   ++Q PSP +NP  P P
Sbjct: 55  PPLDEETLAQFPSPPTNPSPPPP 77


>03_03_0090 +
           14367033-14367279,14367402-14368205,14368314-14370039,
           14370135-14370219,14370398-14370457,14370744-14370836
          Length = 1004

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -1

Query: 644 PQLSLLN--HYLGVLKTNKIEPRSYSIIPCTKYS 549
           P++++ N  H L +LK  KI P   +I  C +YS
Sbjct: 812 PEVTIRNILHALHILKAEKIFPTESNIADCIRYS 845


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,118,577
Number of Sequences: 37544
Number of extensions: 393687
Number of successful extensions: 1031
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)