Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31357
         (800 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   353   1e-99
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.   329   2e-92
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    26   0.35 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          25   1.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   1.1  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   4.4  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   5.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   7.6  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    22   7.6  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  353 bits (867), Expect = 1e-99
 Identities = 161/190 (84%), Positives = 177/190 (93%)
 Frame = +1

Query: 43  MVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 222
           MVD A L+KLE GFSKL  SDSKSLLKKYL+++VFD LK KKTSF STLLDCIQSG+ENL
Sbjct: 1   MVDQAVLDKLETGFSKLSSSDSKSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENL 60

Query: 223 DSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVV 402
           DSGVGIYAPDAE+Y++FA+LFDPIIEDYH GFKKTDKHPPK++GDVD+LGNLDPA EF+V
Sbjct: 61  DSGVGIYAPDAEAYTLFADLFDPIIEDYHGGFKKTDKHPPKDFGDVDSLGNLDPANEFIV 120

Query: 403 STRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQL 582
           STRVRCGRSLEGYPFNPCLTE+QYKEME+KVS TLS LEGELKGTFYPLTGMSKETQQ+L
Sbjct: 121 STRVRCGRSLEGYPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGTFYPLTGMSKETQQKL 180

Query: 583 IDDHFLFKGG 612
           IDDHFLFK G
Sbjct: 181 IDDHFLFKEG 190



 Score =  135 bits (326), Expect = 5e-34
 Identities = 59/64 (92%), Positives = 62/64 (96%)
 Frame = +2

Query: 608 EGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMGGDLQQVYKRLVSA 787
           EGDRFLQAANACRFWPTGRGIYHN++KTFLVWCNEEDHLRIISMQMGGDL QVY+RLV A
Sbjct: 189 EGDRFLQAANACRFWPTGRGIYHNDDKTFLVWCNEEDHLRIISMQMGGDLGQVYRRLVHA 248

Query: 788 VNEI 799
           VNEI
Sbjct: 249 VNEI 252


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score =  329 bits (808), Expect = 2e-92
 Identities = 149/174 (85%), Positives = 164/174 (94%)
 Frame = +1

Query: 91  LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSV 270
           L  SDSKSLLKKYL+++VFD LK KKTSF STLLDCIQSG+ENLDSGVGIYAPDAE+Y++
Sbjct: 1   LSSSDSKSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTL 60

Query: 271 FAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFN 450
           FA+LFDPIIEDYH GFKKTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRSLEGYPFN
Sbjct: 61  FADLFDPIIEDYHGGFKKTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEGYPFN 120

Query: 451 PCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLFKGG 612
           PCLTE+QYKEME+KVS TLS LEGELKGTFYPLTGMSKETQQ+LIDDHFLFK G
Sbjct: 121 PCLTEAQYKEMEEKVSSTLSGLEGELKGTFYPLTGMSKETQQKLIDDHFLFKEG 174



 Score = 61.7 bits (143), Expect = 8e-12
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = +2

Query: 608 EGDRFLQAANACRFWPTGRGIYHNENKT 691
           EGDRFLQAANA RFWPTGRGIYHN++KT
Sbjct: 173 EGDRFLQAANAXRFWPTGRGIYHNDDKT 200


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
 Frame = -3

Query: 438 PLERAAAAHAGGDHELAGGVEVAER---VHVSPVLGRVLVGLLEAIVVVLDDRVKQLGEH 268
           P+++ A     GD  L G + V ER   +   PV+ +  V  LEA++  LD    Q    
Sbjct: 106 PVKKEAVVE--GDLVLGGLMMVHERQDRLTCGPVMPQGGVQALEAMLYTLDKLNTQDIVP 163

Query: 267 GVRLGVRRV-DTDAGVQVLDTRLDAVK 190
           GVR+G   + D D     L+  +D +K
Sbjct: 164 GVRIGAHILDDCDNDTYGLEMSVDFIK 190


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 438 VPLQPLPHRVPVQGDGGQGLRHPVQPRGRAQGHVLPPHRHVEGDP 572
           VP   L +R+ V  DG +  ++  QP G  +  +LP  +  EG P
Sbjct: 570 VPSDVLYNRLVVSEDGSETFKYSSQPYGFPERLLLPKGKK-EGMP 613


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 438 VPLQPLPHRVPVQGDGGQGLRHPVQPRGRAQGHVLPPHRHVEGDP 572
           VP   L +R+ V  DG +  ++  QP G  +  +LP  +  EG P
Sbjct: 570 VPSDVLYNRLVVSEDGSETFKYSSQPYGFPERLLLPKGKK-EGMP 613


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 138 GSIRQPEEQKDLIRIHPP 191
           GS  QP+EQ+ L  + PP
Sbjct: 33  GSAEQPKEQEPLPPVTPP 50


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 206 RVSRTWTPASVSTRRTPSRTP 268
           +V   W P  +  RRTP  TP
Sbjct: 352 QVFLNWMPRLLMMRRTPYSTP 372


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 20 QVPEKPQQWSTPQPSR 67
          Q P+ PQ+ S P PS+
Sbjct: 29 QSPQAPQRGSPPNPSQ 44


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 647 FWPTGRGIYHNENKTFLVWCNEEDHLRIISMQM 745
           F+  GRGI + + K   V  +++ H++I    M
Sbjct: 99  FFLHGRGIVYRDLKLDNVLLDQDGHIKIADFGM 131


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.134    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,406
Number of Sequences: 438
Number of extensions: 4354
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)