Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31355
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.1  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 507 GHWLYECST*IIKCV 551
           GHWL + +  +I CV
Sbjct: 784 GHWLQKATEHVIGCV 798


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 507 GHWLYECST*IIKCV 551
           GHWL + +  +I CV
Sbjct: 784 GHWLQKATEHVIGCV 798


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 507 GHWLYECST*IIKCV 551
           GHWL + +  +I CV
Sbjct: 784 GHWLQKATEHVIGCV 798


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 507 GHWLYECST*IIKCV 551
           GHWL + +  +I CV
Sbjct: 784 GHWLQKATEHVIGCV 798


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +3

Query: 564  PIEYAIVSQTFVATCHKIRFAFEIFNGSRFG 656
            PI+Y +V   F ++   +    +IF    FG
Sbjct: 1080 PIDYTLVFSKFTSSIRMLLIQGQIFGLITFG 1110


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 10  ILFINFCIYN*YTKVLADTLS*LFTIKMTYRKLHIQF 120
           +LF+  CIY+ +   +  T+  LF     +  +H+ F
Sbjct: 160 LLFL-LCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLF 195


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,344
Number of Sequences: 336
Number of extensions: 2927
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)