Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31353
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical pr... 164 5e-41
D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese super... 164 5e-41
D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese super... 164 5e-41
X85790-1|CAA59790.1| 218|Caenorhabditis elegans mangenese super... 149 2e-36
X77021-1|CAA54319.1| 218|Caenorhabditis elegans manganese super... 149 2e-36
U42844-5|AAB53822.1| 218|Caenorhabditis elegans Sod (superoxide... 149 2e-36
Z81545-2|CAB04438.1| 212|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81555-3|CAB04513.1| 221|Caenorhabditis elegans Hypothetical pr... 28 4.5
AF026555-1|AAB97516.1| 221|Caenorhabditis elegans GATA transcri... 28 4.5
U64833-9|AAS47683.1| 312|Caenorhabditis elegans Serpentine rece... 27 7.9
>Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical
protein F10D11.1 protein.
Length = 221
Score = 164 bits (398), Expect = 5e-41
Identities = 71/97 (73%), Positives = 84/97 (86%)
Frame = +1
Query: 157 DFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGID 336
DFGS DNL+ QLS ++VAVQGSGWGWLGY + K L++ATC NQDPL+ATTGLVPLFGID
Sbjct: 123 DFGSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGID 182
Query: 337 VWEHAYYLQYKNVRADYVKAIFDVANWNDISQRYEKA 447
VWEHAYYLQYKNVR DYV AI+ +ANW ++S+R+ KA
Sbjct: 183 VWEHAYYLQYKNVRPDYVNAIWKIANWKNVSERFAKA 219
>D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 221
Score = 164 bits (398), Expect = 5e-41
Identities = 71/97 (73%), Positives = 84/97 (86%)
Frame = +1
Query: 157 DFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGID 336
DFGS DNL+ QLS ++VAVQGSGWGWLGY + K L++ATC NQDPL+ATTGLVPLFGID
Sbjct: 123 DFGSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGID 182
Query: 337 VWEHAYYLQYKNVRADYVKAIFDVANWNDISQRYEKA 447
VWEHAYYLQYKNVR DYV AI+ +ANW ++S+R+ KA
Sbjct: 183 VWEHAYYLQYKNVRPDYVNAIWKIANWKNVSERFAKA 219
>D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese
superoxide dismutaseprecursor protein.
Length = 221
Score = 164 bits (398), Expect = 5e-41
Identities = 71/97 (73%), Positives = 84/97 (86%)
Frame = +1
Query: 157 DFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGID 336
DFGS DNL+ QLS ++VAVQGSGWGWLGY + K L++ATC NQDPL+ATTGLVPLFGID
Sbjct: 123 DFGSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGID 182
Query: 337 VWEHAYYLQYKNVRADYVKAIFDVANWNDISQRYEKA 447
VWEHAYYLQYKNVR DYV AI+ +ANW ++S+R+ KA
Sbjct: 183 VWEHAYYLQYKNVRPDYVNAIWKIANWKNVSERFAKA 219
>X85790-1|CAA59790.1| 218|Caenorhabditis elegans mangenese
superoxide dismutase protein.
Length = 218
Score = 149 bits (361), Expect = 2e-36
Identities = 67/97 (69%), Positives = 80/97 (82%)
Frame = +1
Query: 157 DFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGID 336
DFGS DNL+ +LS ++AVQGSGWGWLGY K+ K L+IATC NQDPL+ G+VPLFGID
Sbjct: 123 DFGSLDNLQKRLSDITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGID 179
Query: 337 VWEHAYYLQYKNVRADYVKAIFDVANWNDISQRYEKA 447
VWEHAYYLQYKNVR DYV AI+ +ANW +IS+R+ A
Sbjct: 180 VWEHAYYLQYKNVRPDYVHAIWKIANWKNISERFANA 216
>X77021-1|CAA54319.1| 218|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 218
Score = 149 bits (361), Expect = 2e-36
Identities = 67/97 (69%), Positives = 80/97 (82%)
Frame = +1
Query: 157 DFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGID 336
DFGS DNL+ +LS ++AVQGSGWGWLGY K+ K L+IATC NQDPL+ G+VPLFGID
Sbjct: 123 DFGSLDNLQKRLSDITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGID 179
Query: 337 VWEHAYYLQYKNVRADYVKAIFDVANWNDISQRYEKA 447
VWEHAYYLQYKNVR DYV AI+ +ANW +IS+R+ A
Sbjct: 180 VWEHAYYLQYKNVRPDYVHAIWKIANWKNISERFANA 216
>U42844-5|AAB53822.1| 218|Caenorhabditis elegans Sod (superoxide
dismutase) protein3 protein.
Length = 218
Score = 149 bits (361), Expect = 2e-36
Identities = 67/97 (69%), Positives = 80/97 (82%)
Frame = +1
Query: 157 DFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGID 336
DFGS DNL+ +LS ++AVQGSGWGWLGY K+ K L+IATC NQDPL+ G+VPLFGID
Sbjct: 123 DFGSLDNLQKRLSDITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGID 179
Query: 337 VWEHAYYLQYKNVRADYVKAIFDVANWNDISQRYEKA 447
VWEHAYYLQYKNVR DYV AI+ +ANW +IS+R+ A
Sbjct: 180 VWEHAYYLQYKNVRPDYVHAIWKIANWKNISERFANA 216
>Z81545-2|CAB04438.1| 212|Caenorhabditis elegans Hypothetical
protein F49H6.2 protein.
Length = 212
Score = 32.7 bits (71), Expect = 0.21
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 183 ESTVDSFCGSTGLRLGLAWLQQTNEEIANSYMPEPGSSAGHHWIGPALRNRCMGA 347
+ T DS C S G L Q+ + +ANS++ G+S+ WIG CM +
Sbjct: 90 QPTADSLCSSEGAVLSSIQSQEELDYMANSFIALNGASSA-FWIGAERTAACMSS 143
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 186 STVDSFCGSTGLRLGLAWLQQTNEEIANSYMPEPGSSAGHHWIG 317
+T +C S G L T+ +A+S E GS+ G WIG
Sbjct: 45 NTAKEYCDSHGYSLATVDNAITSNFLASSAATEFGSNNGQFWIG 88
>Z81555-3|CAB04513.1| 221|Caenorhabditis elegans Hypothetical
protein F58E10.2 protein.
Length = 221
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 280 QNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADY 387
Q+ DP Q +T + P+FG + Y QY + DY
Sbjct: 72 QSYDPAQQSTPVHPMFGSLDMMNCYSQQYPQIGQDY 107
>AF026555-1|AAB97516.1| 221|Caenorhabditis elegans GATA
transcription factor END-1 protein.
Length = 221
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 280 QNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADY 387
Q+ DP Q +T + P+FG + Y QY + DY
Sbjct: 72 QSYDPAQQSTPVHPMFGSLDMMNCYSQQYPQIGQDY 107
>U64833-9|AAS47683.1| 312|Caenorhabditis elegans Serpentine
receptor, class x protein115 protein.
Length = 312
Score = 27.5 bits (58), Expect = 7.9
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = -3
Query: 480 FNRFS*NYSLERFFISLRYII---PVGYIENSFHVVGTNVFVLKIVRVLPYIDSEERDQS 310
FN+ N S+ I+ ++I P Y+ + + NVF +IV PY+ S Q
Sbjct: 37 FNKICVNKSVANVHIATAFLIWAAPCAYLNDYYLPQQFNVFFGQIVGWAPYLMSGPFTQI 96
Query: 309 SGGLQRILVLACSY 268
S + R + ++ Y
Sbjct: 97 SLAVNRAVAISFPY 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,219,989
Number of Sequences: 27780
Number of extensions: 281332
Number of successful extensions: 666
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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