Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31353
         (608 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.4  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   9.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   9.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   9.4  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   9.4  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 212 TATEAVDS*FFKLSQDPKSINDPIL 138
           T T++    FF+L Q+PK  N+  L
Sbjct: 540 TPTDSYIRSFFELLQNPKVSNEQFL 564


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 195 DSFCGSTGLRLGLAWLQQ 248
           D +CG   +R GL+WL++
Sbjct: 685 DLYCG---IRAGLSWLER 699


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 195 DSFCGSTGLRLGLAWLQQ 248
           D +CG   +R GL+WL++
Sbjct: 723 DLYCG---IRAGLSWLER 737


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 127 LMSQRIGSLIDFGSWDNLKNQL 192
           L S+R   L  FGSW N  N L
Sbjct: 660 LYSKRPDLLHLFGSWSNRPNLL 681


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 127 LMSQRIGSLIDFGSWDNLKNQL 192
           L S+R   L  FGSW N  N L
Sbjct: 660 LYSKRPDLLHLFGSWSNRPNLL 681


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 127 LMSQRIGSLIDFGSWDNLKNQL 192
           L S+R   L  FGSW N  N L
Sbjct: 660 LYSKRPDLLHLFGSWSNRPNLL 681


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 346 APIHRFRRAGPIQW 305
           AP+ RF+  GP  W
Sbjct: 550 APVWRFQPWGPFTW 563


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,062
Number of Sequences: 438
Number of extensions: 3744
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)