Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31353
(608 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g10920.1 68416.m01317 superoxide dismutase [Mn], mitochondria... 124 3e-29
At3g56350.1 68416.m06266 superoxide dismutase [Mn], putative / m... 110 8e-25
At4g25100.3 68417.m03608 superoxide dismutase [Fe], chloroplast ... 77 9e-15
At4g25100.2 68417.m03607 superoxide dismutase [Fe], chloroplast ... 77 9e-15
At4g25100.1 68417.m03606 superoxide dismutase [Fe], chloroplast ... 77 9e-15
At5g23310.1 68418.m02727 superoxide dismutase [Fe] / iron supero... 76 2e-14
At5g51100.1 68418.m06335 superoxide dismutase [Fe], putative / i... 69 3e-12
At1g72300.1 68414.m08358 leucine-rich repeat transmembrane prote... 31 0.60
At3g11390.1 68416.m01387 DC1 domain-containing protein contains ... 29 3.2
At4g05530.1 68417.m00842 short-chain dehydrogenase/reductase (SD... 27 7.4
At3g18660.1 68416.m02370 glycogenin glucosyltransferase (glycoge... 27 7.4
At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11) ide... 27 9.7
At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11) ide... 27 9.7
At3g15570.1 68416.m01973 phototropic-responsive NPH3 family prot... 27 9.7
>At3g10920.1 68416.m01317 superoxide dismutase [Mn], mitochondrial
(SODA) / manganese superoxide dismutase (MSD1) identical
to manganese superoxide dismutase [Arabidopsis thaliana]
gi|3273751|gb|AAC24832
Length = 231
Score = 124 bits (300), Expect = 3e-29
Identities = 60/104 (57%), Positives = 73/104 (70%), Gaps = 3/104 (2%)
Frame = +1
Query: 142 IGSLID--FGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTG- 312
+GS ID FGS + L ++S AVQGSGW WLG +K++KKL + T NQDPL G
Sbjct: 125 LGSAIDAHFGSLEGLVKKMSAEGAAVQGSGWVWLGLDKELKKLVVDTTANQDPLVTKGGS 184
Query: 313 LVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRYEK 444
LVPL GIDVWEHAYYLQYKNVR +Y+K ++ V NW S+ YEK
Sbjct: 185 LVPLVGIDVWEHAYYLQYKNVRPEYLKNVWKVINWKYASEVYEK 228
>At3g56350.1 68416.m06266 superoxide dismutase [Mn], putative /
manganese superoxide dismutase, putative similar to
manganese superoxide dismutase (MSD1) [Arabidopsis
thaliana] gi|3273751|gb|AAC24832
Length = 241
Score = 110 bits (264), Expect = 8e-25
Identities = 54/105 (51%), Positives = 70/105 (66%), Gaps = 4/105 (3%)
Frame = +1
Query: 142 IGSLID--FGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTG- 312
+ S ID FGS + L +++ AVQGSGW W G ++++K+L + T NQDPL T G
Sbjct: 130 LASAIDAHFGSLEGLIQKMNAEGAAVQGSGWVWFGLDRELKRLVVETTANQDPL-VTKGS 188
Query: 313 -LVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRYEK 444
LVPL GIDVWEHAYY QYKN RA+Y+K I+ V NW + +EK
Sbjct: 189 HLVPLIGIDVWEHAYYPQYKNARAEYLKNIWTVINWKYAADVFEK 233
>At4g25100.3 68417.m03608 superoxide dismutase [Fe], chloroplast
(SODB) / iron superoxide dismutase (FSD1) identical to
Fe-superoxide dismutase [Arabidopsis thaliana]
gi|166700|gb|AAA32791; supported by cDNA, Ceres:32935
Length = 212
Score = 77.0 bits (181), Expect = 9e-15
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +1
Query: 157 DFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGID 336
DF S++ + + A+ G+GW WL Y+ + K+ + T +PL G PL ID
Sbjct: 113 DFTSYEKFYEEFNAAAATQFGAGWAWLAYSNEKLKV-VKTPNAVNPL--VLGSFPLLTID 169
Query: 337 VWEHAYYLQYKNVRADYVKAIF-DVANWNDISQRYEKA 447
VWEHAYYL ++N R DY+K ++ +W +S R E A
Sbjct: 170 VWEHAYYLDFQNRRPDYIKTFMTNLVSWEAVSARLEAA 207
>At4g25100.2 68417.m03607 superoxide dismutase [Fe], chloroplast
(SODB) / iron superoxide dismutase (FSD1) identical to
Fe-superoxide dismutase [Arabidopsis thaliana]
gi|166700|gb|AAA32791; supported by cDNA, Ceres:32935
Length = 212
Score = 77.0 bits (181), Expect = 9e-15
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +1
Query: 157 DFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGID 336
DF S++ + + A+ G+GW WL Y+ + K+ + T +PL G PL ID
Sbjct: 113 DFTSYEKFYEEFNAAAATQFGAGWAWLAYSNEKLKV-VKTPNAVNPL--VLGSFPLLTID 169
Query: 337 VWEHAYYLQYKNVRADYVKAIF-DVANWNDISQRYEKA 447
VWEHAYYL ++N R DY+K ++ +W +S R E A
Sbjct: 170 VWEHAYYLDFQNRRPDYIKTFMTNLVSWEAVSARLEAA 207
>At4g25100.1 68417.m03606 superoxide dismutase [Fe], chloroplast
(SODB) / iron superoxide dismutase (FSD1) identical to
Fe-superoxide dismutase [Arabidopsis thaliana]
gi|166700|gb|AAA32791; supported by cDNA, Ceres:32935
Length = 212
Score = 77.0 bits (181), Expect = 9e-15
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +1
Query: 157 DFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGID 336
DF S++ + + A+ G+GW WL Y+ + K+ + T +PL G PL ID
Sbjct: 113 DFTSYEKFYEEFNAAAATQFGAGWAWLAYSNEKLKV-VKTPNAVNPL--VLGSFPLLTID 169
Query: 337 VWEHAYYLQYKNVRADYVKAIF-DVANWNDISQRYEKA 447
VWEHAYYL ++N R DY+K ++ +W +S R E A
Sbjct: 170 VWEHAYYLDFQNRRPDYIKTFMTNLVSWEAVSARLEAA 207
>At5g23310.1 68418.m02727 superoxide dismutase [Fe] / iron
superoxide dismutase 3 (FSD3) identical to iron
superoxide dismutase 3 [Arabidopsis thaliana]
gi|3273757|gb|AAC24834
Length = 263
Score = 76.2 bits (179), Expect = 2e-14
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Frame = +1
Query: 157 DFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQ-DPLQATTGLVPLFGI 333
DFGS+ N + + + A++ GSGW WL ++ ++L++ N +PL +P+ +
Sbjct: 153 DFGSFTNFREKFTNAALTQFGSGWVWLVLKREERRLEVVKTSNAINPLVWDD--IPIICV 210
Query: 334 DVWEHAYYLQYKNVRADYVKAIFD-VANWNDISQRYEKA 447
DVWEH+YYL YKN RA Y+ + + +WN R +A
Sbjct: 211 DVWEHSYYLDYKNDRAKYINTFLNHLVSWNAAMSRMARA 249
>At5g51100.1 68418.m06335 superoxide dismutase [Fe], putative / iron
superoxide dismutase, putative similar to Fe-superoxide
dismutase precursor [Medicago sativa]
gi|16974682|gb|AAL32441
Length = 305
Score = 68.5 bits (160), Expect = 3e-12
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 17/122 (13%)
Frame = +1
Query: 157 DFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLV------ 318
DFGS++ + +A+ + GSGW WL Y + +L +A N P + LV
Sbjct: 155 DFGSFEEFLERFKSAAASNFGSGWTWLAY--KANRLDVANAVNPLPKEEDKKLVIVKTPN 212
Query: 319 ----------PLFGIDVWEHAYYLQYKNVRADYVKAIFD-VANWNDISQRYEKALK*IIS 465
PL ID WEHAYYL ++N RA+Y+ + + +W +S R E A+ +
Sbjct: 213 AVNPLVWDYSPLLTIDTWEHAYYLDFENRRAEYINTFMEKLVSWETVSTRLESAIARAVQ 272
Query: 466 RK 471
R+
Sbjct: 273 RE 274
>At1g72300.1 68414.m08358 leucine-rich repeat transmembrane protein
kinase, putative similar to GI:3641252 from [Malus x
domestica] (Plant Mol. Biol. 40 (6), 945-957 (1999))
Length = 1095
Score = 31.1 bits (67), Expect = 0.60
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Frame = -2
Query: 394 LSRSRHER------FCTEDSTRAPIHRFRRAGPIQWWPAEDP 287
LSR++HE +C DS R I+ F G + +W E+P
Sbjct: 851 LSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENP 892
>At3g11390.1 68416.m01387 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 710
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 296 RGSWFWHVAICNFFICLL*PSQPQP 222
+G+WF+H ICNF + L Q P
Sbjct: 241 QGNWFYHCPICNFCLDLSCSQQSVP 265
>At4g05530.1 68417.m00842 short-chain dehydrogenase/reductase (SDR)
family protein similar to peroxisomal short-chain
alcohol dehydrogenase GI:4105190 from [Homo sapiens]
Length = 254
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 262 ISSFVCCSQANPSLSPVLPQKLSTVDSL 179
I VC + ANPS P+L K + +D L
Sbjct: 89 IDIVVCNAAANPSTDPILSSKEAVLDKL 116
>At3g18660.1 68416.m02370 glycogenin glucosyltransferase
(glycogenin)-related low similarity to glycogenin-1 from
Homo sapiens [SP|P46976], Oryctolagus cuniculus
[SP|P13280]
Length = 655
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -2
Query: 544 FSCSNKDSPCVVLKRL*ITKLV*PIFLKLFT*ALFHISEIYHSSWLHRK*LSRSRHERFC 365
FS +K+S C + I KL+ I L + + E YH S H SR + R+
Sbjct: 55 FSTQDKNSSCCCFTKFQIVKLLLFILLSATLFTIIYSPEAYHHSLSHSS--SRRQDPRYF 112
Query: 364 TE 359
++
Sbjct: 113 SD 114
>At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.1 bits (57), Expect = 9.7
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +3
Query: 243 QQTNEEIANSYM-PEPGSSAGHHWIGPALRNRCMGARVLSSVQKRSCRLRESYFRCSQLE 419
Q+T + +N PE G+S HWI + + +GAR V ++ +S+ ++
Sbjct: 348 QETTDSGSNPMRTPEAGASPVGHWIPAHVDHYGLGARSQVPVDRKWALGLQSHAHPREI- 406
Query: 420 *YISEI*KSAQVNN--FKKIG*TNL 488
++E+ K+ Q N +KKIG N+
Sbjct: 407 --MNEVLKALQELNVCWKKIGHYNM 429
>At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.1 bits (57), Expect = 9.7
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +3
Query: 243 QQTNEEIANSYM-PEPGSSAGHHWIGPALRNRCMGARVLSSVQKRSCRLRESYFRCSQLE 419
Q+T + +N PE G+S HWI + + +GAR V ++ +S+ ++
Sbjct: 348 QETTDSGSNPMRTPEAGASPVGHWIPAHVDHYGLGARSQVPVDRKWALGLQSHAHPREI- 406
Query: 420 *YISEI*KSAQVNN--FKKIG*TNL 488
++E+ K+ Q N +KKIG N+
Sbjct: 407 --MNEVLKALQELNVCWKKIGHYNM 429
>At3g15570.1 68416.m01973 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000
Length = 452
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 252 NEEIANSYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQKRSCRLRESYFR 404
N +S P +++G H++ RC+ R ++ Q RLRE R
Sbjct: 316 NSSSISSTTRSPTNASGSHYLEGGSAARCLSKREMNVQQAEIRRLREDVVR 366
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,357,450
Number of Sequences: 28952
Number of extensions: 258092
Number of successful extensions: 691
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1216725696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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