Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31351
(483 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-2|CAA99795.2| 351|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81530-8|CAB04305.2| 329|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z74039-6|CAA98505.2| 331|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z71180-7|CAK55177.1| 647|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical pr... 27 7.1
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 27 7.1
U23510-7|AAC46785.1| 261|Caenorhabditis elegans Hypothetical pr... 27 7.1
AL021475-8|CAK55192.1| 647|Caenorhabditis elegans Hypothetical ... 27 7.1
AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical ... 27 7.1
AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical ... 27 7.1
AL021475-3|CAI79247.1| 465|Caenorhabditis elegans Hypothetical ... 27 7.1
AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein. 27 7.1
AF016420-8|AAB65305.1| 364|Caenorhabditis elegans Serpentine re... 27 9.4
>Z75530-2|CAA99795.2| 351|Caenorhabditis elegans Hypothetical
protein C47E8.4 protein.
Length = 351
Score = 28.7 bits (61), Expect = 2.3
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 88 HRKLLNIFNYDDFLWNLCHSINKRKKECTKDKLLTRNNILCVNKLLVLRYYYISKHII 261
HRK + I + L +I KKE T+ K T N++ V + L++ ++Y + I
Sbjct: 219 HRKNMKIKKGNTISQCLGRAIEALKKEFTELKSCTAENLMFVKEDLIIPHFYTFQDFI 276
>Z81530-8|CAB04305.2| 329|Caenorhabditis elegans Hypothetical
protein F36D1.3 protein.
Length = 329
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 109 RYLKVFYELRHNKICR*NILITSLKLKVTQKFCFS 5
R + VFY HN+ICR + SL + V CF+
Sbjct: 131 RAIIVFYPKNHNEICR-RFMKFSLPITVILPCCFT 164
>Z74039-6|CAA98505.2| 331|Caenorhabditis elegans Hypothetical
protein K03B8.6 protein.
Length = 331
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/55 (21%), Positives = 24/55 (43%)
Frame = +1
Query: 130 WNLCHSINKRKKECTKDKLLTRNNILCVNKLLVLRYYYISKHIIFSHYRQLEIWF 294
W + H + K+K+ K + + +C K + + +F+ R +IWF
Sbjct: 110 WRITHVVPKKKEAEVPKKAMALSFDVCPEKFDAITKGINGRTYVFARERVYQIWF 164
>Z71180-7|CAK55177.1| 647|Caenorhabditis elegans Hypothetical
protein F22E12.4e protein.
Length = 647
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 112 NYDDFLWNLCHSINKRKKECTKDKLLTRNNILCVNKLLVLRYYYISKHIIFS 267
NY D N+ +S ++ + L R L +++ +VLR YI++H+I S
Sbjct: 246 NYKDHNKNVVYSTTLQEHQ---KHLQNRGLALSIHQAMVLRLRYIAEHVIRS 294
>Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 112 NYDDFLWNLCHSINKRKKECTKDKLLTRNNILCVNKLLVLRYYYISKHIIFS 267
NY D N+ +S ++ + L R L +++ +VLR YI++H+I S
Sbjct: 322 NYKDHNKNVVYSTTLQEHQ---KHLQNRGLALSIHQAMVLRLRYIAEHVIRS 370
>Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 112 NYDDFLWNLCHSINKRKKECTKDKLLTRNNILCVNKLLVLRYYYISKHIIFS 267
NY D N+ +S ++ + L R L +++ +VLR YI++H+I S
Sbjct: 322 NYKDHNKNVVYSTTLQEHQ---KHLQNRGLALSIHQAMVLRLRYIAEHVIRS 370
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/78 (20%), Positives = 38/78 (48%)
Frame = +1
Query: 136 LCHSINKRKKECTKDKLLTRNNILCVNKLLVLRYYYISKHIIFSHYRQLEIWFVLKIQDN 315
+C I+K++K + N+ ++ + R+ +S HI H ++ ++++
Sbjct: 964 ICIEISKKRKSDQLELTTDINSDWYFSRKDINRFSKLSMHI---HLKEKREGILIRMVTE 1020
Query: 316 EKKGLCELTPNKQVQWRR 369
+KK L N+++ W+R
Sbjct: 1021 DKKDLQISHENRRISWQR 1038
>U23510-7|AAC46785.1| 261|Caenorhabditis elegans Hypothetical
protein R12C12.6a protein.
Length = 261
Score = 27.1 bits (57), Expect = 7.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 202 ILCVNKLLVLRYYYISKHIIFS 267
+ C LLVL +Y S+H +FS
Sbjct: 10 VSCTGALLVLLVFYFSEHFLFS 31
>AL021475-8|CAK55192.1| 647|Caenorhabditis elegans Hypothetical
protein F22E12.4e protein.
Length = 647
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 112 NYDDFLWNLCHSINKRKKECTKDKLLTRNNILCVNKLLVLRYYYISKHIIFS 267
NY D N+ +S ++ + L R L +++ +VLR YI++H+I S
Sbjct: 246 NYKDHNKNVVYSTTLQEHQ---KHLQNRGLALSIHQAMVLRLRYIAEHVIRS 294
>AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 112 NYDDFLWNLCHSINKRKKECTKDKLLTRNNILCVNKLLVLRYYYISKHIIFS 267
NY D N+ +S ++ + L R L +++ +VLR YI++H+I S
Sbjct: 322 NYKDHNKNVVYSTTLQEHQ---KHLQNRGLALSIHQAMVLRLRYIAEHVIRS 370
>AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 112 NYDDFLWNLCHSINKRKKECTKDKLLTRNNILCVNKLLVLRYYYISKHIIFS 267
NY D N+ +S ++ + L R L +++ +VLR YI++H+I S
Sbjct: 322 NYKDHNKNVVYSTTLQEHQ---KHLQNRGLALSIHQAMVLRLRYIAEHVIRS 370
>AL021475-3|CAI79247.1| 465|Caenorhabditis elegans Hypothetical
protein F22E12.4c protein.
Length = 465
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 112 NYDDFLWNLCHSINKRKKECTKDKLLTRNNILCVNKLLVLRYYYISKHIIFS 267
NY D N+ +S ++ + L R L +++ +VLR YI++H+I S
Sbjct: 64 NYKDHNKNVVYSTTLQEHQ---KHLQNRGLALSIHQAMVLRLRYIAEHVIRS 112
>AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein.
Length = 723
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 112 NYDDFLWNLCHSINKRKKECTKDKLLTRNNILCVNKLLVLRYYYISKHIIFS 267
NY D N+ +S ++ + L R L +++ +VLR YI++H+I S
Sbjct: 322 NYKDHNKNVVYSTTLQEHQ---KHLQNRGLALSIHQAMVLRLRYIAEHVIRS 370
>AF016420-8|AAB65305.1| 364|Caenorhabditis elegans Serpentine
receptor, class r protein5 protein.
Length = 364
Score = 26.6 bits (56), Expect = 9.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 235 YYYISKHIIFSHYRQLEIWFVLKIQDNEKKGLC 333
Y + KH I SH LE +L+++DN+ C
Sbjct: 118 YSWSKKHFISSHLESLENIRLLRLKDNKNIDNC 150
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,011,053
Number of Sequences: 27780
Number of extensions: 205612
Number of successful extensions: 468
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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