Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31349
(321 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 26 0.11
S78567-1|AAB34900.1| 141|Tribolium castaneum GABA receptor subu... 22 1.8
AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH trans... 21 4.2
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 4.2
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 20 5.5
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 20 5.5
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 20 5.5
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 19 9.7
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 19 9.7
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 19 9.7
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 19 9.7
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 25.8 bits (54), Expect = 0.11
Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = -2
Query: 296 YRAPPRGGQHP-ARSHPRQPPQEAQRCR 216
Y PP GGQ P +PR PP + R
Sbjct: 65 YGGPPSGGQPPQGMPYPRFPPYDRMDIR 92
Score = 20.2 bits (40), Expect = 5.5
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 278 GGQHPARSHPRQPPQE 231
GGQ A H + PP +
Sbjct: 191 GGQQGANMHQQGPPHQ 206
>S78567-1|AAB34900.1| 141|Tribolium castaneum GABA receptor subunit
protein.
Length = 141
Score = 21.8 bits (44), Expect = 1.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 72 IFSWAAFSLDKWSRPARRSL 131
I SW +F L++ + PAR +L
Sbjct: 83 IISWVSFWLNRNATPARVAL 102
>AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH
transcription factor protein.
Length = 193
Score = 20.6 bits (41), Expect = 4.2
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 286 PLEEANIQHEATLANLRKK 230
P +IQH+ +AN+R++
Sbjct: 88 PQSFEDIQHQRVMANVRER 106
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 20.6 bits (41), Expect = 4.2
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = -2
Query: 290 APPRGGQHPARSHPRQPPQEAQRCR 216
A P G P S PR ++ CR
Sbjct: 53 ASPTPGDVPTPSSPRSISEDPLNCR 77
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 20.2 bits (40), Expect = 5.5
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 84 AAFSLDKWS 110
AAF LD+WS
Sbjct: 910 AAFGLDQWS 918
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 20.2 bits (40), Expect = 5.5
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 84 AAFSLDKWS 110
AAF LD+WS
Sbjct: 910 AAFGLDQWS 918
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 20.2 bits (40), Expect = 5.5
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 278 GGQHPARSHPRQPPQE 231
GGQ A H + PP +
Sbjct: 193 GGQQGANMHQQGPPHQ 208
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 19.4 bits (38), Expect = 9.7
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -3
Query: 106 HLSNEKAAQEKIVKQLQHQLNEVQSKADE 20
HLS Q+ I + + +NE + DE
Sbjct: 85 HLSQYDTCQQGIYPENKTLINETSLQLDE 113
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 19.4 bits (38), Expect = 9.7
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -3
Query: 106 HLSNEKAAQEKIVKQLQHQLNEVQSKADE 20
HLS Q+ I + + +NE + DE
Sbjct: 85 HLSQYDTCQQGIYPENKTLINETSLQLDE 113
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 19.4 bits (38), Expect = 9.7
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -3
Query: 106 HLSNEKAAQEKIVKQLQHQLNEVQSKADE 20
HLS Q+ I + + +NE + DE
Sbjct: 85 HLSQYDTCQQGIYPENKTLINETSLQLDE 113
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 19.4 bits (38), Expect = 9.7
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -2
Query: 272 QHPARSHPRQPPQEAQRC 219
Q+ R+H + P E Q C
Sbjct: 151 QNHERTHTGEKPFECQEC 168
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,650
Number of Sequences: 336
Number of extensions: 744
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used: 6048897
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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