Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31349
(321 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 30 0.008
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 24 0.52
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 24 0.52
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 2.1
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 2.1
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 2.1
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 4.8
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 4.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 4.8
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 20 6.4
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 20 6.4
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 20 8.4
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 29.9 bits (64), Expect = 0.008
Identities = 20/79 (25%), Positives = 39/79 (49%)
Frame = -3
Query: 283 LEEANIQHEATLANLRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDH 104
L + +I L + ++H+ + + +Q Q + + + +ER YFS + D +
Sbjct: 77 LLQQHILSPTQLQSFMQQHSLYLQQQQQQHHQDSSSEHASNQERFGYFSSLKDHQHQFAE 136
Query: 103 LSNEKAAQEKIVKQLQHQL 47
L +K E+ ++QLQ QL
Sbjct: 137 LGRKKL--EQAIQQLQEQL 153
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.8 bits (49), Expect = 0.52
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 72 IFSWAAFSLDKWSRPARRSL 131
I SW +F LD+ + PAR SL
Sbjct: 257 IVSWVSFWLDQSAVPARVSL 276
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.8 bits (49), Expect = 0.52
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 72 IFSWAAFSLDKWSRPARRSL 131
I SW +F LD+ + PAR SL
Sbjct: 257 IVSWVSFWLDQSAVPARVSL 276
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 2.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 72 IFSWAAFSLDKWSRPARRSL 131
I SW +F L++ + PAR +L
Sbjct: 236 IISWVSFWLNRNATPARVAL 255
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 2.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 72 IFSWAAFSLDKWSRPARRSL 131
I SW +F L++ + PAR +L
Sbjct: 236 IISWVSFWLNRNATPARVAL 255
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.8 bits (44), Expect = 2.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 72 IFSWAAFSLDKWSRPARRSL 131
I SW +F L++ + PAR +L
Sbjct: 175 IISWVSFWLNRNATPARVAL 194
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 4.8
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2
Query: 266 PARSHPRQPPQEAQRC 219
PA SH R PP+ + C
Sbjct: 473 PAFSHSRCPPEIHKSC 488
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 4.8
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2
Query: 266 PARSHPRQPPQEAQRC 219
PA SH R PP+ + C
Sbjct: 473 PAFSHSRCPPEIHKSC 488
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 4.8
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 272 QHPARSHPRQPPQE 231
QH A P QPP +
Sbjct: 1074 QHTAEGVPEQPPHD 1087
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 20.2 bits (40), Expect = 6.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 70 RSFLGQPFRW 99
RS L QPF+W
Sbjct: 218 RSNLSQPFQW 227
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 20.2 bits (40), Expect = 6.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 70 RSFLGQPFRW 99
RS L QPF+W
Sbjct: 308 RSNLSQPFQW 317
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 19.8 bits (39), Expect = 8.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 237 RRLARVASCWMLASS 281
RR +A CW L S+
Sbjct: 207 RRKGSIARCWSLDST 221
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,824
Number of Sequences: 438
Number of extensions: 862
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6968808
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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