Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31349
(321 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g08120.1 68418.m00947 myosin heavy chain-related identical to... 37 0.003
At5g54670.1 68418.m06807 kinesin-like protein C (KATC) 35 0.014
At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50... 34 0.024
At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zi... 33 0.032
At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zi... 33 0.032
At3g03920.1 68416.m00407 Gar1 RNA-binding region family protein ... 33 0.032
At4g00760.1 68417.m00106 two-component responsive regulator fami... 33 0.056
At5g67240.1 68418.m08475 exonuclease family protein contains exo... 32 0.074
At1g67230.1 68414.m07652 expressed protein 32 0.074
At3g18390.1 68416.m02339 expressed protein contains Pfam domain,... 32 0.098
At1g09470.1 68414.m01059 expressed protein ; expression supporte... 32 0.098
At4g27180.1 68417.m03904 kinesin-like protein B (KATB) 31 0.17
At4g13170.1 68417.m02049 60S ribosomal protein L13A (RPL13aC) ri... 31 0.17
At5g32590.1 68418.m03867 myosin heavy chain-related similar to M... 31 0.23
At3g50110.1 68416.m05478 phosphatase-related similar to PTEN1 GI... 31 0.23
At3g28770.1 68416.m03591 expressed protein 31 0.23
At1g67930.1 68414.m07757 Golgi transport complex protein-related... 31 0.23
At3g22790.1 68416.m02873 kinase interacting family protein simil... 30 0.30
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 30 0.30
At1g12430.1 68414.m01436 armadillo/beta-catenin repeat family pr... 30 0.30
At5g48760.1 68418.m06034 60S ribosomal protein L13A (RPL13aD) 30 0.40
At3g60840.1 68416.m06806 microtubule associated protein (MAP65/A... 30 0.40
At3g05130.1 68416.m00557 expressed protein ; expression supporte... 30 0.40
At2g45460.1 68415.m05654 forkhead-associated domain-containing p... 30 0.40
At2g41020.2 68415.m05066 WW domain-containing protein contains P... 30 0.40
At2g41020.1 68415.m05067 WW domain-containing protein contains P... 30 0.40
At2g33793.1 68415.m04145 expressed protein 30 0.40
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 30 0.40
At5g27330.1 68418.m03263 expressed protein 29 0.53
At4g29750.1 68417.m04237 expressed protein contains Pfam domain,... 29 0.53
At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 29 0.69
At5g16180.1 68418.m01891 hypothetical protein contains Pfam doma... 29 0.69
At4g24100.1 68417.m03460 protein kinase family protein contains ... 29 0.69
At1g04890.1 68414.m00486 hypothetical protein contains Pfam prof... 29 0.69
At4g02195.1 68417.m00292 syntaxin 42 (SYP42) / TLG2b identical t... 29 0.92
At3g15950.1 68416.m02017 DNA topoisomerase-related similar to DN... 29 0.92
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 29 0.92
At1g74690.1 68414.m08650 calmodulin-binding family protein low s... 29 0.92
At5g05210.1 68418.m00555 nucleolar matrix protein-related contai... 28 1.2
At4g31570.1 68417.m04483 expressed protein 28 1.2
At3g17360.1 68416.m02218 kinesin motor protein-related similar t... 28 1.2
At1g64690.1 68414.m07333 expressed protein 28 1.2
At3g54630.1 68416.m06044 expressed protein weak similarity to re... 28 1.6
At1g13030.1 68414.m01511 sphere organelles protein-related conta... 28 1.6
At1g12330.1 68414.m01425 expressed protein 28 1.6
At1g11650.2 68414.m01337 RNA-binding protein 45 (RBP45), putativ... 28 1.6
At5g15920.1 68418.m01862 structural maintenance of chromosomes (... 27 2.8
At4g38070.1 68417.m05377 bHLH family protein contains Pfam profi... 27 2.8
At2g22140.1 68415.m02630 expressed protein ; expression supporte... 27 2.8
At1g73460.1 68414.m08504 protein kinase family protein contains ... 27 2.8
At3g54870.1 68416.m06079 armadillo/beta-catenin repeat family pr... 27 3.7
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 27 3.7
At3g23350.1 68416.m02945 expressed protein ; expression supporte... 27 3.7
At1g74770.1 68414.m08663 expressed protein 27 3.7
At1g61000.1 68414.m06868 Nuf2 family protein contains Pfam PF038... 27 3.7
At1g50500.1 68414.m05664 membrane trafficking VPS53 family prote... 27 3.7
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 27 3.7
At5g66540.1 68418.m08389 expressed protein ; supported by full-L... 26 4.9
At5g47180.2 68418.m05818 vesicle-associated membrane family prot... 26 4.9
At5g47180.1 68418.m05817 vesicle-associated membrane family prot... 26 4.9
At5g26980.1 68418.m03219 syntaxin 41 (SYP41) / TLG2a identical t... 26 4.9
At4g10730.1 68417.m01753 protein kinase family protein contains ... 26 4.9
At1g13890.1 68414.m01630 SNAP25 homologous protein, putative / s... 26 4.9
At5g61460.1 68418.m07712 structural maintenance of chromosomes (... 26 6.5
At5g52280.1 68418.m06488 protein transport protein-related low s... 26 6.5
At5g45720.1 68418.m05621 hypothetical protein 26 6.5
At5g07660.1 68418.m00877 structural maintenance of chromosomes (... 26 6.5
At4g14330.1 68417.m02207 phragmoplast-associated kinesin-related... 26 6.5
At4g13630.1 68417.m02121 expressed protein contains Pfam profile... 26 6.5
At3g45850.1 68416.m04962 kinesin motor protein-related kinesin-r... 26 6.5
At1g73450.1 68414.m08503 protein kinase, putative similar to nuc... 26 6.5
At5g46795.1 68418.m05765 expressed protein 25 8.6
At5g26770.2 68418.m03191 expressed protein 25 8.6
At5g26770.1 68418.m03190 expressed protein 25 8.6
At4g26660.1 68417.m03841 expressed protein weak similarity to ph... 25 8.6
At2g46050.1 68415.m05728 pentatricopeptide (PPR) repeat-containi... 25 8.6
At2g38720.1 68415.m04755 microtubule associated protein (MAP65/A... 25 8.6
At2g22795.1 68415.m02704 expressed protein 25 8.6
At2g10350.1 68415.m01087 Ulp1 protease family protein similar to... 25 8.6
At1g09720.1 68414.m01091 kinase interacting family protein simil... 25 8.6
>At5g08120.1 68418.m00947 myosin heavy chain-related identical to
myosin heavy chain-like protein GI:1732515 from
[Arabidopsis thaliana]
Length = 326
Score = 36.7 bits (81), Expect = 0.003
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -3
Query: 226 NDAVSEMGEQLDQLNKLKAKAEKERAQYFSE-VNDLRAGLDHLSNEKAAQEKIVKQLQHQ 50
ND V + D+ K A AEKE E VNDL+ L +EK K ++ ++Q
Sbjct: 114 NDDVMNNSREDDENAKALAGAEKEEMSRLREQVNDLQTKL----SEKEEVLKSMEMSKNQ 169
Query: 49 LNEVQSKADEANR 11
+NE+Q K + NR
Sbjct: 170 VNEIQEKLEATNR 182
>At5g54670.1 68418.m06807 kinesin-like protein C (KATC)
Length = 754
Score = 34.7 bits (76), Expect = 0.014
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Frame = -3
Query: 304 ELGTGP-PLEEAN--IQHEATLANLRKKHNDAV----SEMGEQLDQLNKLKAKAEKERAQ 146
ELG L+ AN IQ + L +++N ++ S++ LD+ ++ + EKER
Sbjct: 176 ELGKAQGDLQTANQRIQSVNDMYKLLQEYNSSLQLYNSKLQGDLDEAHETIKRGEKERTA 235
Query: 145 YFSEVNDLR----AGLDHLSNEKAAQEKIVKQLQHQLNEVQS 32
+ +L+ A + L+ KA+QE I+KQ +NE+ S
Sbjct: 236 IIENIGNLKGQFSALQEQLAASKASQEDIMKQKGELVNEIAS 277
>At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50)
identical to DNA repair-recombination protein GI:7110148
from [Arabidopsis thaliana]
Length = 1316
Score = 33.9 bits (74), Expect = 0.024
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -3
Query: 244 NLRKKHNDAVSEMGEQLDQLNKLKAKAEKE-RAQYFSEVNDLRAGLDHLSNEKAAQEKIV 68
NL+KKH + E +++ + K + EK+ + + + + D LS + EK V
Sbjct: 550 NLKKKHKKIIDECKDRIRGVLKGRLPPEKDMKREIVQALRSIEREYDDLSLKSREAEKEV 609
Query: 67 KQLQHQLNEVQSKADEANR 11
LQ ++ EV + + N+
Sbjct: 610 NMLQMKIQEVNNSLFKHNK 628
>At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 33.5 bits (73), Expect = 0.032
Identities = 19/89 (21%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Frame = -3
Query: 280 EEANIQHEATLANLRKKHNDAVSEM-GEQLDQLNKLKAKAEKERAQYFSEVNDLR-AGLD 107
+E +Q+ L +KK + E+ + ++LN+L + EK + +++ E+N ++ +
Sbjct: 264 QELLVQNLRQLVEEKKKDMKEIEELCSVKSEELNQLMEEKEKNQQKHYRELNAIQERTMS 323
Query: 106 HLSNEKAAQEKIVKQLQHQLNEVQSKADE 20
H+ EK+ + L+ + +++ K +E
Sbjct: 324 HIQKIVDDHEKLKRLLESERKKLEIKCNE 352
>At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 33.5 bits (73), Expect = 0.032
Identities = 19/89 (21%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Frame = -3
Query: 280 EEANIQHEATLANLRKKHNDAVSEM-GEQLDQLNKLKAKAEKERAQYFSEVNDLR-AGLD 107
+E +Q+ L +KK + E+ + ++LN+L + EK + +++ E+N ++ +
Sbjct: 264 QELLVQNLRQLVEEKKKDMKEIEELCSVKSEELNQLMEEKEKNQQKHYRELNAIQERTMS 323
Query: 106 HLSNEKAAQEKIVKQLQHQLNEVQSKADE 20
H+ EK+ + L+ + +++ K +E
Sbjct: 324 HIQKIVDDHEKLKRLLESERKKLEIKCNE 352
>At3g03920.1 68416.m00407 Gar1 RNA-binding region family protein
contains Pfam profile PF04410: Gar1 protein RNA binding
region
Length = 202
Score = 33.5 bits (73), Expect = 0.032
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +1
Query: 187 AGRAAHPSRRRHRCASCGGWRGWLRAGCWPPRGGARYPIR 306
AGR SR R R S RG R G +PPRGG+R R
Sbjct: 158 AGRGRGDSRGRGRGGSFSRGRGAPRGGRFPPRGGSRGSFR 197
>At4g00760.1 68417.m00106 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver domain
Length = 367
Score = 32.7 bits (71), Expect = 0.056
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Frame = -3
Query: 304 ELGTGPPLEEANIQHEATL-ANLRKKHNDA------VSEMGEQLDQLNKLKAKAEKERAQ 146
++ PP + +I H +L A L+K +N++ + + ++L Q NK K +A+ + +
Sbjct: 138 QIDINPPEKNHSITHTQSLGAELKKNNNNSEVETEDLDKYKDELGQGNKRKERADTDTGE 197
Query: 145 YFSEVNDLRAGLDHLSNEKAAQEKIVKQLQHQLNEVQSKADEANRSR 5
+ + N G D L ++K + LQ++ E +EAN R
Sbjct: 198 HTEKNN----GSD-LGDQKKPKLLFADDLQNETLEAVPNIEEANNER 239
>At5g67240.1 68418.m08475 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 745
Score = 32.3 bits (70), Expect = 0.074
Identities = 21/78 (26%), Positives = 40/78 (51%)
Frame = -3
Query: 259 EATLANLRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQ 80
E AN +D + EM E ++L ++ E + E+ +L+ L+ ++ AQ
Sbjct: 668 ETKEANANHCEDDHLKEMEELKEKLKAMEFAISCEG--HSKEIEELKQKLNAKEHQIQAQ 725
Query: 79 EKIVKQLQHQLNEVQSKA 26
+KI+ L+ +L + QSK+
Sbjct: 726 DKIIANLKMKLEKKQSKS 743
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 32.3 bits (70), Expect = 0.074
Identities = 21/88 (23%), Positives = 40/88 (45%)
Frame = -3
Query: 283 LEEANIQHEATLANLRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDH 104
+EE + E L +KH + ++ +L ++ + + E +E L +
Sbjct: 388 MEEKVAKREQALDRKLEKHKEKENDFDLRLKGISGREKALKSEEKALETEKKKLLEDKEI 447
Query: 103 LSNEKAAQEKIVKQLQHQLNEVQSKADE 20
+ N KA EK+ + Q QL+E+ + DE
Sbjct: 448 ILNLKALVEKVSGENQAQLSEINKEKDE 475
>At3g18390.1 68416.m02339 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 848
Score = 31.9 bits (69), Expect = 0.098
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = -3
Query: 241 LRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVN-DLRAGLDHLSNEKAAQEKIVK 65
+R + +AV +G+++ A+ + +A++ E+ D R + ++ + A ++VK
Sbjct: 556 VRNREIEAVQPVGDKVPAEAGTLAEFYEAQARWGKEITPDHREKMIEEAS-RVANARVVK 614
Query: 64 QLQHQLNEVQSKADEANR 11
++QH+LN QSK A +
Sbjct: 615 RIQHKLNLAQSKFQRAEK 632
>At1g09470.1 68414.m01059 expressed protein ; expression supported
by MPSS
Length = 336
Score = 31.9 bits (69), Expect = 0.098
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = -3
Query: 235 KKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQLQ 56
K+H D V+ +GEQL+ L K E + Q E+ L+ D + + K +++
Sbjct: 141 KEHEDQVTRLGEQLENLRKELRVRESSQKQLRDEL--LKVEGDIMRAVSVVKTKENSEVR 198
Query: 55 HQLNEVQSKADE 20
+ LNE K E
Sbjct: 199 NMLNEDTPKNSE 210
>At4g27180.1 68417.m03904 kinesin-like protein B (KATB)
Length = 745
Score = 31.1 bits (67), Expect = 0.17
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Frame = -3
Query: 283 LEEAN--IQHEATLANLRKKHNDAV----SEMGEQLDQLNKLKAKAEKERAQYFSEVNDL 122
L+ AN IQ + L +++N ++ S++ LD+ ++ + EKER + +L
Sbjct: 175 LQTANQRIQAVNDMYKLLQEYNSSLQLYNSKLQGDLDEAHENIKRGEKERTGIVESIGNL 234
Query: 121 ----RAGLDHLSNEKAAQEKIVKQLQHQLNEVQS 32
+A D L+ K +Q+ ++KQ +NE+ S
Sbjct: 235 KGQFKALQDQLAASKVSQDDVMKQKDELVNEIVS 268
>At4g13170.1 68417.m02049 60S ribosomal protein L13A (RPL13aC)
ribosomal protein L13a -Lupinus luteus,PID:e1237871
Length = 206
Score = 31.1 bits (67), Expect = 0.17
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3
Query: 277 EANIQHEATLANLRKKHNDAVSEMGEQLDQLNKLKAKAEK 158
E H T+ L K + M E+ QLNKL+ KAEK
Sbjct: 149 EVGWNHYDTIKELETKRKERSQVMYERKKQLNKLRTKAEK 188
>At5g32590.1 68418.m03867 myosin heavy chain-related similar to
Myosin heavy chain, non-muscle (Zipper protein) (Myosin
II)(SP:Q99323) {Drosophila melanogaster}
Length = 761
Score = 30.7 bits (66), Expect = 0.23
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = -3
Query: 235 KKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQLQ 56
+ NDA ++ +QLD L+ K+ E + + ++ L + + E L
Sbjct: 497 RSSNDARQKLEDQLDNLSSELMKSNGELQDQYQRYDKIQEELSTARDTLSESESSAYDLS 556
Query: 55 HQLNEVQSK 29
+QL+E+Q K
Sbjct: 557 NQLSELQLK 565
>At3g50110.1 68416.m05478 phosphatase-related similar to PTEN1
GI:5566292 from [Drosophila melanogaster]; contains
prosite evidence: PS00383: Tyrosine specific protein
phosphatases active site
Length = 632
Score = 30.7 bits (66), Expect = 0.23
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = -3
Query: 235 KKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAG--LDHLSNEKAAQEKIVKQ 62
K +D+ + + + K K+ ++ FS+ + G + +NEK A
Sbjct: 509 KSKSDSTQQQSQSSSSADSSKLKSNEKDDDVFSDSDGEEEGNSQSYSTNEKTASSMHTTS 568
Query: 61 LQHQLNEVQSKAD-EANRS 8
HQ+NE + D ANRS
Sbjct: 569 KPHQINEPPKRDDPSANRS 587
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 30.7 bits (66), Expect = 0.23
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -3
Query: 238 RKKHNDAVS-EMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQ 62
RKK D E E + K + K EK+++Q+ V + NE+ ++ K ++
Sbjct: 1111 RKKEEDKKDMEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKEIES 1170
Query: 61 LQHQLNEVQSKADEANRSR 5
+ Q NEV K ++++ +
Sbjct: 1171 SKSQKNEVDKKEKKSSKDQ 1189
>At1g67930.1 68414.m07757 Golgi transport complex protein-related
similar to golgi transport complex protein (GTC90)
GB:5453670 [Homo sapiens] (stimulates in vitro Golgi
transport J. Biol. Chem. 273 (45), 29565-29576 (1998))
Length = 832
Score = 30.7 bits (66), Expect = 0.23
Identities = 22/98 (22%), Positives = 45/98 (45%)
Frame = -3
Query: 301 LGTGPPLEEANIQHEATLANLRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDL 122
L +G P A H+A + ND +S E L QL+ L + A+ + S V+ L
Sbjct: 74 LASGSPASTAERLHQAIRLLDSQLRNDVISRHPELLAQLSSL-SHADVSLSSLRSSVSSL 132
Query: 121 RAGLDHLSNEKAAQEKIVKQLQHQLNEVQSKADEANRS 8
++ + + ++ + K ++ QL+ + + + + S
Sbjct: 133 QSSIRRVRSDLSEPIKSIRSKSVQLSNLHTATELLSHS 170
>At3g22790.1 68416.m02873 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 30.3 bits (65), Expect = 0.30
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = -3
Query: 259 EATLANLRKKHNDAVSEMGEQLDQLNK-LKAKAEKERAQYFSEVNDLRAGLDHLSNEKAA 83
E + NL++ H+ SE L + N+ L+ + E+ +V D + SN+ A
Sbjct: 271 ETEVENLKQAHSRLHSEKEAGLAEYNRCLEMISNLEK-----KVRDAEENAQNFSNQSAK 325
Query: 82 QEKIVKQLQHQLNEVQSKAD 23
E +K L+H+L +V D
Sbjct: 326 AEDEIKALRHELVKVNEVKD 345
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094) [Homo
sapiens]
Length = 927
Score = 30.3 bits (65), Expect = 0.30
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -3
Query: 259 EATLANLRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDL 122
+A L LR++H A+ MGE+ ++L +L+A + Y +VN L
Sbjct: 877 KAELEALRQRHAAALELMGERDEELEELRADIVDLKEMYREQVNML 922
>At1g12430.1 68414.m01436 armadillo/beta-catenin repeat family
protein / kinesin motor family protein
Length = 919
Score = 30.3 bits (65), Expect = 0.30
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -3
Query: 178 LKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQLQHQLNEVQSKADEAN 14
+ + + A EV++L+ L + K A E+ V +L+HQLNE + N
Sbjct: 519 ITSNGNRSIAPALEEVSELKKLLQKEAQSKMAAEEEVNRLKHQLNEFKKVEASGN 573
Score = 29.1 bits (62), Expect = 0.69
Identities = 25/100 (25%), Positives = 43/100 (43%)
Frame = -3
Query: 307 GELGTGPPLEEANIQHEATLANLRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVN 128
G P LEE + L L +K + E++++L + +K A SE+
Sbjct: 523 GNRSIAPALEEVS-----ELKKLLQKEAQSKMAAEEEVNRLKHQLNEFKKVEASGNSEIM 577
Query: 127 DLRAGLDHLSNEKAAQEKIVKQLQHQLNEVQSKADEANRS 8
L L++ + +K E + L QL ++ ADE R+
Sbjct: 578 RLHKMLENETQQKEKLEGEIATLHSQLLQLSLTADETRRN 617
>At5g48760.1 68418.m06034 60S ribosomal protein L13A (RPL13aD)
Length = 206
Score = 29.9 bits (64), Expect = 0.40
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 277 EANIQHEATLANLRKKHNDAVSEMGEQLDQLNKLKAKAEK 158
E H T+ L K + + E+ QLNKL+ KAEK
Sbjct: 149 EVGWNHYDTIKELETKRKERAHVVYERKKQLNKLRVKAEK 188
>At3g60840.1 68416.m06806 microtubule associated protein
(MAP65/ASE1) family protein low similarity to protein
regulating cytokinesis 1 (PRC1) [Homo sapiens]
GI:2865521; contains Pfam profile PF03999: Microtubule
associated protein (MAP65/ASE1 family)
Length = 648
Score = 29.9 bits (64), Expect = 0.40
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Frame = -3
Query: 283 LEEANIQHEATLANLRKKHNDAVSEMGEQLDQLNK-----------LKAKAEKERAQYFS 137
LE N+Q L LRK+ + + E +DQL K LK A +E
Sbjct: 74 LENVNVQ----LDGLRKRKAERMIRFNEVIDQLLKLSLQLGNPTDYLKKFAAEETDLSLQ 129
Query: 136 EVNDLRAGLDHLSNEKAAQEKIVKQLQHQLNEVQSKADE 20
+ +LR+ L L NEK+ + + V+ L LN + S E
Sbjct: 130 RLEELRSQLGELQNEKSKRLEEVECLLKTLNSLCSVLGE 168
>At3g05130.1 68416.m00557 expressed protein ; expression supported
by MPSS
Length = 634
Score = 29.9 bits (64), Expect = 0.40
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 211 EMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNE 92
E Q+D L + K + E E A+Y E LR LD +S+E
Sbjct: 68 EKRNQIDSLVQAKDELETELARYCQEKTGLRDELDQVSDE 107
>At2g45460.1 68415.m05654 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 915
Score = 29.9 bits (64), Expect = 0.40
Identities = 16/80 (20%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = -3
Query: 256 ATLANLRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQ- 80
A + L + +++ E+GE++ + ++A + + + +L+ GLD N++ +
Sbjct: 314 AQVNKLSAEQKNSIDELGERVSASLQTLSEANEVIQSQKASIAELKTGLDEERNQRREER 373
Query: 79 EKIVKQLQHQLNEVQSKADE 20
E + +L+ ++ Q +A E
Sbjct: 374 ETAIAELKAAIHRCQIEAQE 393
>At2g41020.2 68415.m05066 WW domain-containing protein contains Pfam
domain PF00397: WW domain
Length = 382
Score = 29.9 bits (64), Expect = 0.40
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 190 GRAAHPSRRRHRCASCGGW 246
G+ HP + RC+ CGGW
Sbjct: 291 GKGEHPPSQLPRCSGCGGW 309
>At2g41020.1 68415.m05067 WW domain-containing protein contains Pfam
domain PF00397: WW domain
Length = 463
Score = 29.9 bits (64), Expect = 0.40
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 190 GRAAHPSRRRHRCASCGGW 246
G+ HP + RC+ CGGW
Sbjct: 291 GKGEHPPSQLPRCSGCGGW 309
>At2g33793.1 68415.m04145 expressed protein
Length = 212
Score = 29.9 bits (64), Expect = 0.40
Identities = 17/79 (21%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = -3
Query: 238 RKKHNDAVSEMGEQL-DQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQ-EKIVK 65
RKK +++S + ++ ++++LK+K EKER + ++ +++ ++AA+ E++ K
Sbjct: 59 RKKKEESISSVSTEVKSKIDELKSKLEKERQNFSKALSKSSKECENILKDEAAKFEELHK 118
Query: 64 Q-LQHQLNEVQSKADEANR 11
+ ++ + + +Q D ++
Sbjct: 119 KFVKDKADHLQGLKDTISK 137
>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
myosin heavy chain (GI:1850913) [Entamoeba histolytica];
similar to Intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae]
Length = 555
Score = 29.9 bits (64), Expect = 0.40
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -3
Query: 259 EATLANLRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQ---YFSEVNDLRAGL 110
EA LA+ K H + E+ Q N+ +A+ E+E+ + +++ND++ L
Sbjct: 215 EAELASKAKDHESTLEEVNRLQGQKNETEAELEREKQEKPALLNQINDVQKAL 267
Score = 25.4 bits (53), Expect = 8.6
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = -3
Query: 226 NDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQLQHQL 47
N + ++ ++ D L A K+ EVN L+ + E +++ L +Q+
Sbjct: 201 NQKLEDVKKERDGLEAELASKAKDHESTLEEVNRLQGQKNETEAELEREKQEKPALLNQI 260
Query: 46 NEVQ 35
N+VQ
Sbjct: 261 NDVQ 264
>At5g27330.1 68418.m03263 expressed protein
Length = 628
Score = 29.5 bits (63), Expect = 0.53
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = -3
Query: 202 EQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQLQHQLNEV 38
EQ+++L K K E E E N ++ ++ + + +EK+V+QL + NE+
Sbjct: 326 EQINELVKEKTVKESELEGLMVENNSIKKEIEMAMVQFSDKEKLVEQLLREKNEL 380
>At4g29750.1 68417.m04237 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 776
Score = 29.5 bits (63), Expect = 0.53
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = -3
Query: 196 LDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQLQHQLNEVQSKADEA 17
+D + K K K + +F E++D + EK +K +Q+QH +E + DE+
Sbjct: 67 IDTHQRKKTK-RKPKPGFFEEISDKWSSRISPKTEKLPWQKQEEQIQHHEDEEDEEGDES 125
Query: 16 NRSRS 2
+ + S
Sbjct: 126 SSNLS 130
>At5g48600.1 68418.m06011 structural maintenance of chromosomes
(SMC) family protein similar to SP|P50532 Chromosome
assembly protein XCAP-C {Xenopus laevis}; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1241
Score = 29.1 bits (62), Expect = 0.69
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = -3
Query: 253 TLANLRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEK 74
+L NL D +M E ++L K ++ EK + + N+LRA + + K
Sbjct: 282 SLQNLENSLKDERVKMDESNEELKKFESVHEKHKKRQEVLDNELRACKEKFKEFERQDVK 341
Query: 73 IVKQLQHQLNEVQSKADEANRSRS 2
+ L+H +++ D+ + S
Sbjct: 342 HREDLKHVKQKIKKLEDKLEKDSS 365
>At5g16180.1 68418.m01891 hypothetical protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 718
Score = 29.1 bits (62), Expect = 0.69
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = -3
Query: 205 GEQLDQLNKLKAKAE-KERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQLQHQLNEVQSK 29
G+QL + NK E +E + F E++ + EKA EK +K +H+L+ ++SK
Sbjct: 487 GKQLKETNKSGTLLEFQELQRKFGEMDPRNLETEA---EKARLEKELKSQEHKLSILKSK 543
Query: 28 ADEAN 14
+++N
Sbjct: 544 IEKSN 548
>At4g24100.1 68417.m03460 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 709
Score = 29.1 bits (62), Expect = 0.69
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 166 AEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQLQHQL 47
+E+ER S ++DLRA LD L+ E ++ QLQ +L
Sbjct: 663 SERERL-LLSSISDLRARLDDLTEELDIEKSKYSQLQQKL 701
>At1g04890.1 68414.m00486 hypothetical protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 494
Score = 29.1 bits (62), Expect = 0.69
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = -3
Query: 280 EEANIQHEATLANLRKKHNDAVSEMGEQLDQLNKLKA----KAEKERAQYFSEVNDLRAG 113
++ N A + +R +V ++ E L + +A + +KER+ S ++ A
Sbjct: 176 QQVNSNSSAEQSFVRNVEKRSVRDLEELLKEERAARATVCVELDKERSAAASAADEAMAM 235
Query: 112 LDHLSNEKAAQEKIVKQLQHQLNE 41
+ L +EKAA E +Q Q + E
Sbjct: 236 IHRLQDEKAAIEMEARQFQRLVEE 259
>At4g02195.1 68417.m00292 syntaxin 42 (SYP42) / TLG2b identical to
SP|Q9SWH4 Syntaxin 42 (AtSYP42) (AtTLG2b) {Arabidopsis
thaliana}
Length = 323
Score = 28.7 bits (61), Expect = 0.92
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 6/93 (6%)
Frame = -3
Query: 280 EEANIQHEATLANLRKKHNDAVSEMGEQLDQLNKLK------AKAEKERAQYFSEVNDLR 119
+E +++ R D + MG Q KLK A+ E+E Q VNDL
Sbjct: 189 DEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKLKEGQHVSAEREREIQQVLGSVNDLA 248
Query: 118 AGLDHLSNEKAAQEKIVKQLQHQLNEVQSKADE 20
+ LS Q IV ++ + + V + +E
Sbjct: 249 QIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEE 281
>At3g15950.1 68416.m02017 DNA topoisomerase-related similar to DNA
topoisomerase IV subunit A (GI:26454107) [Mycoplasma
penetrans]
Length = 772
Score = 28.7 bits (61), Expect = 0.92
Identities = 18/86 (20%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = -3
Query: 271 NIQHEATLANLRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLR-AGLDHLSN 95
++ E L L K+ D +E+G D+++K + + ++ + +N+L+ AG D ++
Sbjct: 77 SLSEEPALETL-KESVDTSAELGAVTDEVDKPSSMLDHIELEFEAHINELKEAGSDGINK 135
Query: 94 EKAAQEKIVKQLQHQLNEVQSKADEA 17
+ +++ +H++ E + EA
Sbjct: 136 VEESKDDEEAARRHKMLEAIEREFEA 161
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 28.7 bits (61), Expect = 0.92
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = -3
Query: 217 VSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQLQHQLNEV 38
+SE+ QL + + A A + A+ S++ + +H++ E+ + V QLQ +L
Sbjct: 583 LSEVKAQLKENVENAATASVKVAELTSKLQEH----EHIAGERDVLNEQVLQLQKELQAA 638
Query: 37 QSKADEANRSRS 2
QS DE ++ S
Sbjct: 639 QSSIDEQKQAHS 650
>At1g74690.1 68414.m08650 calmodulin-binding family protein low
similarity to SF16 protein [Helianthus annuus]
GI:560150; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 587
Score = 28.7 bits (61), Expect = 0.92
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Frame = -3
Query: 289 PPLEEANIQHEATLANLRKKHNDAV-SEMGEQLD---QLNKLKAKAEKERAQYFSEVNDL 122
P +E+ I+ E +LRK HN V S + Q ++ K K EK R + V++
Sbjct: 323 PAVEDPQIELEKVKRSLRKVHNPVVESSIQPQRSPRKEVEKPKLGVEKTRESSYPLVHET 382
Query: 121 RAGLDHLSNEKAAQEKIVKQLQHQLNEVQ 35
++ +EK QE I +Q + +++ ++
Sbjct: 383 AEEPVNVCDEKKKQE-ISEQPEEEVHALE 410
>At5g05210.1 68418.m00555 nucleolar matrix protein-related contains
Pfam domain, PF04935: Surfeit locus protein 6
Length = 386
Score = 28.3 bits (60), Expect = 1.2
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -3
Query: 244 NLRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEK 74
NL+K D + L L+ LK K EKER S+ L+ L +K QEK
Sbjct: 71 NLKKAKRDKLDPEKSALTTLDLLKEKIEKERLA--SQKQKLKKKHADLREQKLEQEK 125
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 28.3 bits (60), Expect = 1.2
Identities = 21/91 (23%), Positives = 43/91 (47%)
Frame = -3
Query: 283 LEEANIQHEATLANLRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDH 104
L ++N+ EAT ++ V+ + + LDQ ++ +ER Y ++ L A +
Sbjct: 1781 LSDSNVV-EATSRDIAVVETPDVASLTKDLDQALHVQKLTREERDLYMAKQQSLVAENEA 1839
Query: 103 LSNEKAAQEKIVKQLQHQLNEVQSKADEANR 11
L + ++ +KQ + + V+ K + A R
Sbjct: 1840 LDKKIIELQEFLKQEEQKSASVREKLNVAVR 1870
>At3g17360.1 68416.m02218 kinesin motor protein-related similar to
KLP2 protein GB:CAA63826 from [Xenopus laevis]
Length = 2008
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -3
Query: 160 KERAQYFSEVND-LRAGLDHLSNEKAAQEKIVKQLQHQLNEVQSK 29
K+R Q +E ND LRA + L EKAA E+ + + + +N ++ +
Sbjct: 1530 KQRIQILAEQNDELRALVSDLCKEKAAAEEGLDEQRDLVNRLEKE 1574
>At1g64690.1 68414.m07333 expressed protein
Length = 273
Score = 28.3 bits (60), Expect = 1.2
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = -3
Query: 214 SEMGEQLDQLNKLKAKAEKER-AQYFSEVNDLRAGLDHLSNEKAAQEKIVKQLQHQLNEV 38
SE+G+ D++ +LKA+ + ER A+ +E+ + D + E+ A+E Q + E+
Sbjct: 75 SELGKAQDEIKELKAELDYERKARRRAELMIKKLAKD-VEEERMAREAEEMQNKRLFKEL 133
Query: 37 QSKADEANRSR 5
S+ E R +
Sbjct: 134 SSEKSEMVRMK 144
>At3g54630.1 68416.m06044 expressed protein weak similarity to
retinoblastoma-associated protein HEC [Homo sapiens]
GI:2501873
Length = 568
Score = 27.9 bits (59), Expect = 1.6
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = -3
Query: 211 EMGEQLDQLNK---LKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQLQHQLNE 41
E+ +L+ L K K EK +A ++VN R + ++ A EK+V++ + E
Sbjct: 226 ELEAKLESLRKGPSKKESLEKVKADLENDVNKFRTIVVEYTDRNPAMEKVVEE---KAKE 282
Query: 40 VQSKADEANR 11
+++K +E R
Sbjct: 283 LKAKEEERER 292
>At1g13030.1 68414.m01511 sphere organelles protein-related contains
weak similarity to Swiss-Prot:Q09003 sphere organelles
protein SPH-1 (Sphere protein 1) [Xenopus laevis]
Length = 608
Score = 27.9 bits (59), Expect = 1.6
Identities = 22/90 (24%), Positives = 44/90 (48%)
Frame = -3
Query: 289 PPLEEANIQHEATLANLRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGL 110
PP E + + + + ++KK + +GE D+ N A +ER Q +R G
Sbjct: 73 PPFESSCVLKDKDIVCVKKKKESLLEIVGEDSDE-NVYNAIEVEERPQ-------IRPGE 124
Query: 109 DHLSNEKAAQEKIVKQLQHQLNEVQSKADE 20
L+NE+ +E + + + +E++ +A+E
Sbjct: 125 MLLANEEFQKETGGYESESEEDELEEEAEE 154
>At1g12330.1 68414.m01425 expressed protein
Length = 505
Score = 27.9 bits (59), Expect = 1.6
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Frame = -3
Query: 283 LEEANIQHEATLANLRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDH 104
L A + H+ L KK DAV E +L A+ EK+ + ++L++GLD
Sbjct: 176 LAVAELSHK--LIQATKKKEDAVIEAS----RLKSSMAELEKKLNKLEIYCHNLKSGLDE 229
Query: 103 LSNEKAA--------QEKIVKQLQHQLNEVQSKADEANRS 8
SN+K + ++I++Q ++E +S +RS
Sbjct: 230 CSNKKQSVPIRKDGFNDRIIQQFLVSVSESRSSIRALSRS 269
>At1g11650.2 68414.m01337 RNA-binding protein 45 (RBP45), putative
similar to gb|U90212 DNA binding protein ACBF from
Nicotiana tabacum and contains 3 PF|00076 RNA
recognition motif domains. ESTs gb|T44278, gb|R65195,
gb|N65904, gb|H37499, gb|R90487, gb|N95952, gb|T44278,
gb|Z20166, gb|N96891, gb|W43137, gb|F15504, gb|F1
Length = 405
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 299 GYRAPPRGGQHPARSHPRQPPQEAQ 225
GY+ P+ GQ P P+QPPQ+ Q
Sbjct: 380 GYQQTPQAGQQP----PQQPPQQQQ 400
>At5g15920.1 68418.m01862 structural maintenance of chromosomes
(SMC) family protein (MSS2) similar to SMC-related
protein MSS2 [Arabidopsis thaliana] GI:9965743; contains
Pfam profiles PF02483: SMC family C-terminal domain,
PF02463: RecF/RecN/SMC N terminal domain
Length = 1053
Score = 27.1 bits (57), Expect = 2.8
Identities = 23/100 (23%), Positives = 41/100 (41%)
Frame = -3
Query: 301 LGTGPPLEEANIQHEATLANLRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDL 122
+ T LEE Q E + K D V+ E L L + K + S+V +L
Sbjct: 324 VATYKELEELKKQEEHRQERILKATEDLVAAERE-LQNLPVYERPVAKLE-ELSSQVTEL 381
Query: 121 RAGLDHLSNEKAAQEKIVKQLQHQLNEVQSKADEANRSRS 2
++ N+K EK++ Q ++ L + K + + +
Sbjct: 382 HHSINGKKNQKEDNEKLLSQKRYTLRQCVDKLKDMENANN 421
>At4g38070.1 68417.m05377 bHLH family protein contains Pfam profile:
PF00010 helix-loop-helix DNA-binding domain; PMID:
12679534; putative bHLH131 transcription factor
Length = 1513
Score = 27.1 bits (57), Expect = 2.8
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -3
Query: 235 KKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAG---LDHLSNEKAAQEKIVK 65
K+ + S + EQLDQ N AKA+ E + V L LD N+ +K V+
Sbjct: 457 KREGNCYSLLMEQLDQKNAALAKAQMEIKEERESVACLLKRIEMLDLFENQNIQMQKEVE 516
Query: 64 QLQHQLNE 41
+ + + E
Sbjct: 517 RFKEMVEE 524
>At2g22140.1 68415.m02630 expressed protein ; expression supported
by MPSS
Length = 506
Score = 27.1 bits (57), Expect = 2.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -3
Query: 88 AAQEKIVKQLQHQLNEVQSKADEANRSR 5
A +EK +++ Q +L + SKA+EA R R
Sbjct: 194 AMEEKKLRKEQERLEKAASKAEEAERKR 221
>At1g73460.1 68414.m08504 protein kinase family protein contains
protein kinase domain Pfam:PF00069
Length = 1169
Score = 27.1 bits (57), Expect = 2.8
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -3
Query: 238 RKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAG 113
RK H D V +Q D + + + A + SEV D AG
Sbjct: 578 RKSHRDDVYVEDDQHDSVRSIGVGINSDAADFGSEVRDSLAG 619
>At3g54870.1 68416.m06079 armadillo/beta-catenin repeat family
protein / kinesin motor family protein kinesin,
Syncephalastrum racemosum, AJ225894
Length = 941
Score = 26.6 bits (56), Expect = 3.7
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = -3
Query: 283 LEEANIQHEAT---LANLRKKHNDAVSE---MGEQLDQLNKLKAKAEKERAQYFSEVNDL 122
LEE + +E+T L ++ ++D + + +GE++ + + EK+R Q SE++ L
Sbjct: 685 LEELSQMYESTVDELQTVKLDYDDLLQQKEKLGEEVRDMKERLLLEEKQRKQMESELSKL 744
Query: 121 RAGLDHLSNEKAAQEK 74
+ L +E +EK
Sbjct: 745 KKNL--RESENVVEEK 758
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 160 KERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQLQHQLNE 41
KE Y S L +DHL+ E Q K+ +H+L +
Sbjct: 448 KEEFDYESLCRKLETQVDHLTAEVERQNKLRNSEKHELEK 487
>At3g54670.1 68416.m06049 structural maintenance of chromosomes
(SMC) family protein similar to SMC1 protein [Bos
taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC
protein) [Xenopus laevis] GI:3328231; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 26.6 bits (56), Expect = 3.7
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = -3
Query: 232 KHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGL-DHLS-NEKAAQEKIVKQL 59
KH+ + +M + + +LNK K+R ++ L + L D+ E+A + I +
Sbjct: 338 KHSKEIEQMQKSIKELNKKMELFNKKRQDSSGKLPMLDSQLQDYFRLKEEAGMKTIKLRD 397
Query: 58 QHQLNEVQSKAD-EANRS 8
+H++ E Q + D EA R+
Sbjct: 398 EHEVLERQRRTDLEALRN 415
>At3g23350.1 68416.m02945 expressed protein ; expression supported
by MPSS
Length = 225
Score = 26.6 bits (56), Expect = 3.7
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Frame = -3
Query: 232 KHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVK-QLQ 56
K D +SE +D NKL K + + S + AG L+ + + K K Q
Sbjct: 147 KRIDLISESYSLIDDENKLSEKDQASKETLVSGICTKLAGFSPLNKFQGGRTKAAKFQTL 206
Query: 55 HQLNEVQSKA-DEAN 14
+ V SK D N
Sbjct: 207 SNVERVSSKCYDRCN 221
>At1g74770.1 68414.m08663 expressed protein
Length = 985
Score = 26.6 bits (56), Expect = 3.7
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = -3
Query: 271 NIQHEATLAN-LRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSN 95
NI H ++ + L KH D VS + ++ +LN L + A + ++ R L
Sbjct: 685 NISHSFSIDHELETKHFDKVSFILNEMSELNMLVSTINTTAADHDRKMKYERLCLSLREI 744
Query: 94 EKAAQEKIVKQLQHQLNEV 38
K+ + + + +QH+ E+
Sbjct: 745 CKSMHKLLSEHIQHEETEL 763
>At1g61000.1 68414.m06868 Nuf2 family protein contains Pfam PF03800:
Nuf2 family domain; similar to Myosin-like protein NUF2
(Nuclear filament-containing protein 2) (Nuclear
division protein nuf2) (Swiss-Prot:Q10173)
[Schizosaccharomyces pombe]
Length = 974
Score = 26.6 bits (56), Expect = 3.7
Identities = 15/68 (22%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = -3
Query: 199 QLDQLNKLKAKAEKERAQYF----SEVNDLRAGLDHLSNEKAAQEKIVKQLQHQLNEVQS 32
+L+QLN+ + EKE+A F ++N+L+ ++ E ++ V+ + +++ +
Sbjct: 328 KLEQLNESLKQLEKEKAVMFDDWTKQLNELKVEVESRRRELETRQTNVESVVAMVDDNTA 387
Query: 31 KADEANRS 8
K ++ +S
Sbjct: 388 KTNQVRQS 395
>At1g50500.1 68414.m05664 membrane trafficking VPS53 family protein
contains Pfam domain PF04100: Vps53-like, N-terminal
Length = 798
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/57 (21%), Positives = 28/57 (49%)
Frame = -3
Query: 187 LNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQLQHQLNEVQSKADEA 17
+ K++ + + A S V + A + V++L H++ E++SKA+++
Sbjct: 27 MQKIQGEIRRVDASILSAVRQQSNSGTKAKEDLADATRAVEELSHKIQEIKSKAEQS 83
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 26.6 bits (56), Expect = 3.7
Identities = 23/88 (26%), Positives = 36/88 (40%)
Frame = -3
Query: 292 GPPLEEANIQHEATLANLRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAG 113
G + E + HE + NL K D E+ E + ++ +A + + N +A
Sbjct: 20 GVVIPEVHNSHE--VENLDKAPEDLKDEVQESIPVPDEQEASEDHDEVMLHPVHNPAKA- 76
Query: 112 LDHLSNEKAAQEKIVKQLQHQLNEVQSK 29
EKAAQEK K+ + E K
Sbjct: 77 -----KEKAAQEKAAKEEAEDVAEANKK 99
>At5g66540.1 68418.m08389 expressed protein ; supported by
full-Length cDNA gi:12057175 from [Arabidopsis thaliana]
Length = 524
Score = 26.2 bits (55), Expect = 4.9
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -3
Query: 202 EQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQL 59
++LD+ K AE A+YF + N A H K + K+L
Sbjct: 378 KELDESKSKKGLAEVYEAEYFQKANPAFAPTTHSDELKKEASMLFKKL 425
>At5g47180.2 68418.m05818 vesicle-associated membrane family protein
/ VAMP family protein similar to VAP27 GI:6688926
[Nicotiana plumbaginifolia], to VAMP-associated protein
B GI:4240464 [Rattus norvegicus] and to
Vesicle-associated membrane protein/synaptobrevin
binding protein (VAP-33) (SP:Q16943)[Aplysia
californica]
Length = 220
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 112 LDHLSNEKAAQEKIVKQLQHQLNEVQSKADEAN 14
+ L E+ A K +QLQH+L V+ + ++ N
Sbjct: 156 IQRLKEERDAAVKQTQQLQHELETVRRRRNQRN 188
>At5g47180.1 68418.m05817 vesicle-associated membrane family protein
/ VAMP family protein similar to VAP27 GI:6688926
[Nicotiana plumbaginifolia], to VAMP-associated protein
B GI:4240464 [Rattus norvegicus] and to
Vesicle-associated membrane protein/synaptobrevin
binding protein (VAP-33) (SP:Q16943)[Aplysia
californica]
Length = 220
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 112 LDHLSNEKAAQEKIVKQLQHQLNEVQSKADEAN 14
+ L E+ A K +QLQH+L V+ + ++ N
Sbjct: 156 IQRLKEERDAAVKQTQQLQHELETVRRRRNQRN 188
>At5g26980.1 68418.m03219 syntaxin 41 (SYP41) / TLG2a identical to
SP|O65359 Syntaxin 41 (AtSYP41) (AtTLG2a) {Arabidopsis
thaliana}
Length = 322
Score = 26.2 bits (55), Expect = 4.9
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = -3
Query: 238 RKKHNDAVSEMGEQLD--QLNKLK------AKAEKERAQYFSEVNDLRAGLDHLSNEKAA 83
R ++ + G+ L+ Q++K+K + EKE Q VNDL + LS
Sbjct: 200 RNRYRPEEDDFGDMLNEHQMSKIKKSEEVSVEREKEIQQVVESVNDLAQIMKDLSALVID 259
Query: 82 QEKIVKQLQHQLNEVQSKADE 20
Q IV ++ + + V + ++
Sbjct: 260 QGTIVDRIDYNIENVATTVED 280
>At4g10730.1 68417.m01753 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 708
Score = 26.2 bits (55), Expect = 4.9
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -3
Query: 166 AEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQLQHQLNEVQSK 29
AE+ER +++ +LRA + L+ E ++ QLQ +L V +
Sbjct: 661 AERERL-LLTKITELRARMKELTEELEVEKSKQTQLQQKLKSVTGR 705
>At1g13890.1 68414.m01630 SNAP25 homologous protein, putative /
synaptosomal-associated protein SNAP25-like, putative
(SNAP30) identical to SP|Q9LMG8 Putative SNAP25
homologous protein SNAP30 (AtSNAP30)
(Synaptosomal-associated protein SNAP25-like 3)
{Arabidopsis thaliana}; similar to SP|Q9S7P9 SNAP25
homologous protein SNAP33 (AtSNAP33)
(Synaptosomal-associated protein SNAP25-like 1) (SNAP-25
like protein 1) (Snap25a) {Arabidopsis thaliana};
contains Pfam profile: PF05739 SNARE domain
Length = 263
Score = 26.2 bits (55), Expect = 4.9
Identities = 16/76 (21%), Positives = 34/76 (44%)
Frame = -3
Query: 238 RKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQL 59
R A+ + L ++ + KAK + + + DL++ + +E Q K + L
Sbjct: 180 RSSSQPALDQPTNALQKVEQEKAKQDDGLSDLSDILGDLKSMAVDMGSEIDKQNKALDHL 239
Query: 58 QHQLNEVQSKADEANR 11
++E+ S+ AN+
Sbjct: 240 GDDVDELNSRVQGANQ 255
>At5g61460.1 68418.m07712 structural maintenance of chromosomes
(SMC) family protein very strong similarity to SMC-like
protein (MIM) [Arabidopsis thaliana] GI:5880614;
contains Pfam profile PF02463: RecF/RecN/SMC N terminal
domain
Length = 1057
Score = 25.8 bits (54), Expect = 6.5
Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = -3
Query: 283 LEEANIQHEATLANLRKKH-NDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLD 107
+E + Q+E RK+ + + E+ ++ QL K +++AEK E++DL+ +
Sbjct: 645 IEASKEQNEINQCMRRKREAEENLEELELKVRQLKKHRSQAEKVLTTKELEMHDLKNTV- 703
Query: 106 HLSNEKAAQEKIVKQLQHQLNEVQSKADE 20
+ +A V +LQ ++ + + DE
Sbjct: 704 -AAEIEALPSSSVNELQREIMKDLEEIDE 731
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 25.8 bits (54), Expect = 6.5
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = -3
Query: 295 TGPPLEEAN---IQHEATLANLRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYF-SEVN 128
T L EAN +Q++ TL +++K + +++ EQ + + K KA + Q SEV
Sbjct: 605 TKKTLAEANNLRLQNK-TLEEMQEKTHTEITQEKEQRKHVEE-KNKALSMKVQMLESEVL 662
Query: 127 DLRAGLDHLSNEKAAQEKIVKQLQHQLNEVQSK 29
L D S EKI+++ + + +E + K
Sbjct: 663 KLTKLRDESSAAATETEKIIQEWRKERDEFERK 695
>At5g45720.1 68418.m05621 hypothetical protein
Length = 900
Score = 25.8 bits (54), Expect = 6.5
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = -3
Query: 217 VSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQLQHQLNEV 38
V+ E+ D+ ++ + E+ Y V +++ N+K E IVK L QLNEV
Sbjct: 107 VTPSDEKFDRSSRKSYRVEEVNEVY--SVPSVKSVSKDRINKKV-NEAIVKTLSDQLNEV 163
Query: 37 QSKADE 20
+D+
Sbjct: 164 GGDSDD 169
>At5g07660.1 68418.m00877 structural maintenance of chromosomes (SMC)
family protein similar to SMC-like protein (MIM)
[Arabidopsis thaliana] GI:5880614; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain
Length = 1058
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/56 (21%), Positives = 24/56 (42%)
Frame = -3
Query: 190 QLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQLQHQLNEVQSKAD 23
Q+NK+ + ++E Y ++DLR + + K K + +L + D
Sbjct: 855 QINKINHRLKRENENYSESIDDLRIMHGEKEQKIGKKRKTYKSCREKLKVCKDAVD 910
>At4g14330.1 68417.m02207 phragmoplast-associated kinesin-related
protein 2 (PAKRP2) identical to cDNA
phragmoplast-associated kinesin-related protein 2
(PAKRP2) GI:16973450
Length = 869
Score = 25.8 bits (54), Expect = 6.5
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = -3
Query: 226 NDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDH----LSNEKAAQEKIVKQL 59
++ + ++ + Q K + +A+K+ + EV LR+ L +NE+ +EK+ ++
Sbjct: 398 DEFIIKLQSEKKQKEKERNEAQKQLKKKEEEVAALRSLLTQREACATNEEEIKEKVNERT 457
Query: 58 QHQLNEVQSKADEANR 11
Q +E+ K +E R
Sbjct: 458 QLLKSELDKKLEECRR 473
>At4g13630.1 68417.m02121 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 581
Score = 25.8 bits (54), Expect = 6.5
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -3
Query: 208 MGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQLQHQLNE 41
+GE+ L + EKER S ++ + L EKA+ E +Q Q + E
Sbjct: 241 LGEERAARASLALELEKERNAAASAADEALGMILRLQEEKASIEMEARQYQRMIEE 296
>At3g45850.1 68416.m04962 kinesin motor protein-related
kinesin-related protein TKRP125, Nicotiana tabacum,
PIR:T02017
Length = 1058
Score = 25.8 bits (54), Expect = 6.5
Identities = 16/66 (24%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = -3
Query: 208 MGEQLDQLNKLKAKAEKERAQYFSEV-NDLRAGLDHLSNEKAAQEKIVKQLQHQLNEVQS 32
M E++++L +L+++++ +R E+ N + LS + EK +++ +H L +++
Sbjct: 446 MAEKIERL-ELQSESKDKRVVDLQELYNSQQILTAELSEKLEKTEKKLEETEHSLFDLEE 504
Query: 31 KADEAN 14
K +AN
Sbjct: 505 KYRQAN 510
>At1g73450.1 68414.m08503 protein kinase, putative similar to
nuclear serine/threonine protein kinase GI:3582644 from
[Rattus norvegicus]
Length = 1152
Score = 25.8 bits (54), Expect = 6.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -3
Query: 238 RKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAG 113
RK H D V +Q D + + + A + SEV D AG
Sbjct: 573 RKSHLDDVYVEDDQHDSVRSIGVGINSDAADFGSEVRDSLAG 614
>At5g46795.1 68418.m05765 expressed protein
Length = 192
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/77 (18%), Positives = 31/77 (40%)
Frame = -3
Query: 241 LRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQ 62
L + S G ++K K + S +N L H + + +EKI ++
Sbjct: 84 LESSSGSSTSTGGSGETSSQRIKRDLTKTLPIFSSNINPFHVPLQHPQDLREMEEKIEEE 143
Query: 61 LQHQLNEVQSKADEANR 11
+ ++N + ++ N+
Sbjct: 144 KEEEINVEKPLLEKKNK 160
>At5g26770.2 68418.m03191 expressed protein
Length = 335
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 235 KKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEV 131
++H D V+ +G QLD L + E + Q EV
Sbjct: 140 REHEDRVTHLGHQLDNLQRDLKTRECSQKQLREEV 174
>At5g26770.1 68418.m03190 expressed protein
Length = 335
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 235 KKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEV 131
++H D V+ +G QLD L + E + Q EV
Sbjct: 140 REHEDRVTHLGHQLDNLQRDLKTRECSQKQLREEV 174
>At4g26660.1 68417.m03841 expressed protein weak similarity to
phragmoplast-associated kinesin-related protein 1
[Arabidopsis thaliana] GI:8745333
Length = 806
Score = 25.4 bits (53), Expect = 8.6
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -3
Query: 193 DQLNKLKAKAEKERAQYFSEVNDLRAGL-DHLSNEKAAQEKIVK 65
D+L+ ++A+ EKER E +LR L D +AA E +V+
Sbjct: 659 DELSAIRAEKEKERELLKKENKNLRTQLRDTAEAVQAAGELLVR 702
>At2g46050.1 68415.m05728 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 590
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 139 SEVNDLRAGLDHLSNEKAAQEKIVKQ 62
S V+ L A LDHLS+ K +VKQ
Sbjct: 40 SSVSKLSASLDHLSDVKQEHGFMVKQ 65
>At2g38720.1 68415.m04755 microtubule associated protein
(MAP65/ASE1) family protein low similarity to myosin
[Schistosoma japonicum] GI:3941320; contains Pfam
profile PF03999: Microtubule associated protein
(MAP65/ASE1 family)
Length = 587
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Frame = -3
Query: 136 EVNDLRAGLDHLSNEKAAQ-EKIVKQLQ--HQLNEVQS 32
++++LRA L L NEKA + +K+ + H+L+E+ S
Sbjct: 152 KLDELRADLQDLRNEKAVRLQKVNSYISAVHELSEILS 189
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 25.4 bits (53), Expect = 8.6
Identities = 20/91 (21%), Positives = 37/91 (40%)
Frame = -3
Query: 280 EEANIQHEATLANLRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGLDHL 101
E I+ E + K N+ ++ E+ + K EKE + E + +
Sbjct: 543 ENEKIEKEEASSQEESKENETETKEKEESSSQEETK---EKENEKIEKEESAPQEETKEK 599
Query: 100 SNEKAAQEKIVKQLQHQLNEVQSKADEANRS 8
NEK +E+ Q + + E ++K E + S
Sbjct: 600 ENEKIEKEESASQEETKEKETETKEKEESSS 630
>At2g10350.1 68415.m01087 Ulp1 protease family protein similar to
At5g28170, At1g35110, At1g44880, At3g42530, At4g19320,
At5g36020, At4g03970, At3g43010 ; contains Pfam profile
PF02902: Ulp1 protease family, C-terminal catalytic
domain
Length = 1110
Score = 25.4 bits (53), Expect = 8.6
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = -3
Query: 196 LDQLNKLKAKAEKERAQYFSEVNDLRAGLDHLSNEKAAQEKIVKQLQHQLNEVQSKADEA 17
+D+ KL K+E +++ SE L+ ++ LSN EK K ++ + + S + A
Sbjct: 373 VDRKKKLGVKSEAPKSKLISE---LQTKVEELSNRVMKLEKTKKAVRFKRSTKLSSSFVA 429
Query: 16 NRSRS 2
SRS
Sbjct: 430 CSSRS 434
>At1g09720.1 68414.m01091 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 928
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 130 NDLRAGLDHLSNEKAAQEKIVKQLQHQLNEVQSKADEANRSR 5
N+L+AGLD +A E++V +L+ L + A + R
Sbjct: 823 NELQAGLDRARALRAEVERVVCKLEENLGILDGTATRSLSKR 864
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,363,741
Number of Sequences: 28952
Number of extensions: 72357
Number of successful extensions: 543
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 350523880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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