Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31346
         (763 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0672 + 30775458-30775523,30775594-30775662,30775748-307757...    29   5.3  

>02_05_0672 + 30775458-30775523,30775594-30775662,30775748-30775797,
            30775869-30775929,30776016-30776381,30776542-30776754,
            30776826-30777056,30777502-30777615,30777703-30778495,
            30778535-30778905,30779007-30779378,30779448-30780438,
            30781068-30781141,30781953-30782030,30782448-30782525
          Length = 1308

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 281  YKNVDIFILLIMKYKKVIRCPEYDCSLLIFFASIG 385
            YK V +F L +       + P++DCS +IF +S G
Sbjct: 1228 YKKVKVFSLAVADTDGSNQLPQHDCSTVIFRSSEG 1262


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,203,683
Number of Sequences: 37544
Number of extensions: 355670
Number of successful extensions: 559
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)