Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31344
         (390 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   3.3  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   3.3  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   4.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   10.0 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    20   10.0 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   10.0 

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 159 ARQQTCGSGLRDAANSGRLLNKHDDAV 239
           A  +TCG+GL   A+  + L ++ D +
Sbjct: 49  AELKTCGNGLAFDASDPKFLTENCDYI 75


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 159 ARQQTCGSGLRDAANSGRLLNKHDDAV 239
           A  +TCG+GL   A+  + L ++ D +
Sbjct: 49  AELKTCGNGLAFDASDPKFLTENCDYI 75


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +3

Query: 186 LRDAANSGRLLNKHDDAVDSSRLLPTLAAHGVFGPRPKLH 305
           L D  +    +   DD  D    L   +AH V  P+P LH
Sbjct: 32  LSDRDDDDENITVDDDDTDGRESLSPSSAHTVLIPQP-LH 70


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +2

Query: 338 IWTSNISRR 364
           IW+SN+S+R
Sbjct: 454 IWSSNLSKR 462


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +1

Query: 232 TPWIVHDYFRPW 267
           TPW     +RPW
Sbjct: 485 TPWHTFYDYRPW 496


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 159 LLFTGTFFICHYY 121
           ++FT  F +C YY
Sbjct: 90  IIFTVHFLLCTYY 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,345
Number of Sequences: 336
Number of extensions: 1746
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8225022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)