Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31344
(390 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 33 0.11
04_04_1584 + 34601927-34602144,34603324-34603510,34604239-346044... 29 0.99
02_05_0787 - 31742685-31742702,31742703-31742744,31742993-317430... 29 1.3
02_01_0188 - 1262908-1262970,1264185-1264790,1265290-1266030 29 1.7
12_02_0156 - 14532000-14532098,14532669-14534330,14534445-145346... 28 2.3
01_01_0794 - 6184622-6185317 28 2.3
02_05_0101 - 25824093-25824112,25824734-25824842,25824927-258264... 27 4.0
02_04_0236 - 21170753-21170794,21171089-21172220,21172332-211726... 27 4.0
09_04_0163 - 15249816-15249920,15250032-15250163,15250463-152506... 27 5.3
07_01_0893 + 7484598-7484744,7484837-7484902,7494387-7494530,749... 27 5.3
04_03_0954 - 21124183-21124507,21124645-21124682,21124781-21124948 27 5.3
11_01_0656 - 5301048-5301441,5301779-5301976,5302056-5302228,530... 27 7.0
09_06_0274 + 21967740-21968230,21968411-21968550,21968711-219689... 27 7.0
11_06_0147 - 20626854-20627181,20627267-20627377,20627461-206278... 26 9.2
03_05_0157 - 21346104-21347693 26 9.2
03_01_0581 + 4310136-4310186,4310940-4311144,4311245-4311410,431... 26 9.2
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 32.7 bits (71), Expect = 0.11
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +1
Query: 259 RPWRHTASLARDLSSTIKTEKDKFQINLDVQHFSPDEISVKTAE 390
RPW H + L + I TEK Q N D + S I VK AE
Sbjct: 432 RPWEHKVVNEKPLQNNIDTEK-PLQNNTDTEKSSSSAIDVKLAE 474
>04_04_1584 +
34601927-34602144,34603324-34603510,34604239-34604496,
34604866-34604965,34608523-34608639,34608704-34608804,
34609035-34610141
Length = 695
Score = 29.5 bits (63), Expect = 0.99
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -3
Query: 304 WSLGRGPKTPCAAKVGSSRELSTASSCLLRSRPELAASRSPDPQVCCLAAFY 149
W GR P + ++ LS++SS + R + AA+ P+P VC + A Y
Sbjct: 147 WVSGRRETPPQPRRETAAVLLSSSSSPIHLPRRDDAAAAIPNPHVCSVRACY 198
>02_05_0787 -
31742685-31742702,31742703-31742744,31742993-31743022,
31743337-31744183,31744431-31744560,31744682-31744814
Length = 399
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +1
Query: 196 PLTPDDFLTNMMTPWIVHDYFRPWRHTASLARDLSSTIKTEKDK 327
PL PD +M +I + + W++T S D+S ++ +++
Sbjct: 356 PLLPDALFDELMRDYISNCFLEDWKNTDSKNLDVSDILQVSRNR 399
>02_01_0188 - 1262908-1262970,1264185-1264790,1265290-1266030
Length = 469
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -3
Query: 286 PKTPCAAKVGSSRELSTASSCLLRSRPELAASRSPDPQVCCLAAFYRDILHLPL 125
P P AA VG + ++ SCL + L + + DP+V + F++ + +PL
Sbjct: 371 PPPPGAAVVGYQNRIQSSGSCLSGADDGLLTACTWDPRVRHNSFFFQSGISVPL 424
>12_02_0156 -
14532000-14532098,14532669-14534330,14534445-14534660,
14534730-14534907,14535065-14535276
Length = 788
Score = 28.3 bits (60), Expect = 2.3
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 350 WTSKLIWNLSFSVLIVELRSRAKDAVCRQGR 258
W S L+W FS V + R VCR GR
Sbjct: 291 WRSALLWRTFFSTATVVVVLRGFIEVCRNGR 321
>01_01_0794 - 6184622-6185317
Length = 231
Score = 28.3 bits (60), Expect = 2.3
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -3
Query: 244 LSTASSCLLRSRPELAASRSPDPQVCCLAAFYRDILHLPL 125
L SC SR S S +P+ CC Y ++L + L
Sbjct: 27 LPVDQSCFALSRLSYRRSSSSNPRACCSTTSYLEVLAISL 66
>02_05_0101 - 25824093-25824112,25824734-25824842,25824927-25826429,
25826596-25827333,25827712-25827919,25828455-25830409,
25830868-25830960,25831044-25831100,25831189-25831272,
25831345-25831437,25831622-25832053,25833593-25833933,
25834663-25835215
Length = 2061
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 166 NKLVDQDFGMPLTPDDFLTNMMTPWIVHDYFRPWRHTASLARDLSSTIKTEK 321
N++++ DF LTP++ N T +V + PW+ ST T +
Sbjct: 1763 NQVINDDFSNGLTPNNQAYNRRTGNMVDTFDLPWQPEFGGTHPSKSTFHTSR 1814
>02_04_0236 -
21170753-21170794,21171089-21172220,21172332-21172601,
21173043-21173305,21173406-21173492,21174149-21174326,
21174784-21174984,21175769-21176025
Length = 809
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 350 WTSKLIWNLSFSVLIVELRSRAKDAVCRQGRK*S*TIHGVIMF 222
W S L+W F+ +V + R+ CR G+ G+IMF
Sbjct: 330 WRSALLWRAFFTTAVVAVVLRSLIEFCRSGKCGLFGQGGLIMF 372
>09_04_0163 -
15249816-15249920,15250032-15250163,15250463-15250629,
15251259-15251448,15252530-15252661,15253275-15253382,
15253513-15253608,15253702-15253809,15253917-15254089,
15255026-15255401,15255887-15256030,15256125-15256799,
15256917-15256982,15257082-15257249
Length = 879
Score = 27.1 bits (57), Expect = 5.3
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +1
Query: 130 ADEECPCKKQRDNKLVDQDFGMPLTPDD 213
+D+EC + DNK+ D D+ ++ ++
Sbjct: 8 SDDECSSNSKSDNKVADSDYANSISEEE 35
>07_01_0893 +
7484598-7484744,7484837-7484902,7494387-7494530,
7494860-7495235,7495904-7496017,7496282-7496454,
7496562-7496669,7497311-7497377,7497791-7497904,
7498121-7498257,7498727-7498813,7498962-7498986,
7499044-7499266,7499770-7499947,7500039-7500152,
7500249-7500380,7500488-7500588,7500720-7500933
Length = 839
Score = 27.1 bits (57), Expect = 5.3
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +1
Query: 130 ADEECPCKKQRDNKLVDQDFGMPLTPDD 213
+D+EC + DNK+ D D+ ++ ++
Sbjct: 8 SDDECSSNSKSDNKVADSDYANSISEEE 35
>04_03_0954 - 21124183-21124507,21124645-21124682,21124781-21124948
Length = 176
Score = 27.1 bits (57), Expect = 5.3
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +1
Query: 130 ADEECPCKKQRDNKLVDQDFGMPLTPDD 213
+D+EC + DNK+ D D+ ++ ++
Sbjct: 8 SDDECSSNSKSDNKVADSDYANSISEEE 35
>11_01_0656 -
5301048-5301441,5301779-5301976,5302056-5302228,
5302691-5302935,5303014-5303191,5303578-5303760,
5303858-5303962,5304621-5304758,5304846-5305802
Length = 856
Score = 26.6 bits (56), Expect = 7.0
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 177 GSGLRDAANSGRLLNKHDDAVDSSRLLPTLAAHGVFGPRPK-LHNQDGKR*IPDQFG 344
G G D+ NS + DD D SR L +A GP+ + Q+G+R FG
Sbjct: 99 GGGSSDSVNSVLQNEEFDDDDDDSRSLSHDSAQSSPGPQDRSRRTQEGRRGATVTFG 155
>09_06_0274 +
21967740-21968230,21968411-21968550,21968711-21968905,
21969524-21969652,21970063-21970218,21970507-21970589,
21972229-21972433,21972601-21972805,21973059-21973194,
21973990-21974164,21974470-21974528,21974642-21974716,
21974804-21974920,21975010-21975080,21975170-21975473,
21975721-21976086,21976404-21976514
Length = 1005
Score = 26.6 bits (56), Expect = 7.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 167 LSRCFLQGHSSSATTILINSNTDSTTVMENG 75
L RCF SSSAT L +S T +++ G
Sbjct: 9 LRRCFSTSTSSSATPTLYSSGTTPVSILSWG 39
>11_06_0147 -
20626854-20627181,20627267-20627377,20627461-20627846,
20627949-20628057,20629375-20629421,20629506-20629646
Length = 373
Score = 26.2 bits (55), Expect = 9.2
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 228 DDAVDSSRLLPTLAAHGVFGPRPKLHNQDGKR*IPDQFGRPTFL 359
+DA R+L LAA G L ++G R GRP FL
Sbjct: 105 NDAELEERILQHLAAAAAMGRSHHLGRREGHRGRSGSHGRPQFL 148
>03_05_0157 - 21346104-21347693
Length = 529
Score = 26.2 bits (55), Expect = 9.2
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 164 SRCFLQGHSSSATTILINSNTDSTTVMENGMKF 66
SRC SSS TT+L DSTT + +G++F
Sbjct: 125 SRCKEADGSSSWTTLLCLEPGDSTTDVFDGVEF 157
>03_01_0581 +
4310136-4310186,4310940-4311144,4311245-4311410,
4312035-4312257,4312891-4312967,4313091-4313278,
4313363-4313457,4313674-4313807,4313914-4314024,
4314304-4314619,4314919-4315040,4315183-4315293,
4315824-4316012,4316105-4316263,4316449-4316530,
4317080-4317190
Length = 779
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 159 ARQQTCGSGLRDAANSGRLLNKHDDAVDSSRLLPTLAAHGV 281
++ + SG ANSG + N D + +++L+P L GV
Sbjct: 410 SKYEDASSGQGAVANSGDIENIQDQNLCATKLVPLLLQKGV 450
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,288,897
Number of Sequences: 37544
Number of extensions: 201944
Number of successful extensions: 557
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 660830060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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