Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31344
         (390 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    24   0.71 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   3.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   5.0  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   6.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   8.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   8.7  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 0.71
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = -3

Query: 367 HPARNVGRPN*SGIYLFPS*LWSLGRG--PKTPCAAKVGSSRELSTASSCLL 218
           +P+R VG  N +GI  FP  +  + R   P   C A + S R + TA+ C++
Sbjct: 157 NPSRIVGGTN-TGINEFPM-MAGIKRTYEPGMICGATIISKRYVLTAAHCII 206


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 186 LRDAANSGRLLNKHDDAVDSSRLLPTLAAHGVFGPR 293
           +++  N  + +N H    D+SRL P    +G F  R
Sbjct: 216 IKNFDNCDQRINYHFGMTDNSRLEPGTNKNGKFFSR 251


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 33  IEVLLQLSDNEEFHSVLHYCR 95
           I++ + +   E+F SV  YCR
Sbjct: 97  IDIFMGMRTYEDFLSVAVYCR 117


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 110 SNTDSTTVMENGMKFFII 57
           S T STT+ +  +K F++
Sbjct: 391 STTTSTTISQKHIKVFVV 408


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 313 TEKDKFQINLDVQHFSPD 366
           T  D++   L ++H SPD
Sbjct: 661 TNMDQYNSILMIEHLSPD 678


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +1

Query: 136 EECPCKKQRDNKLVDQDFGMPLTPDDFLTNM 228
           ++ P ++Q+  +   Q    P+T DDF  N+
Sbjct: 838 QQQPQQQQQQQQQQQQQQRGPMTNDDFNPNI 868


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,533
Number of Sequences: 438
Number of extensions: 1998
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)