Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31343
         (663 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0155 - 32031370-32031707,32033066-32033279                       34   0.12 
12_02_0847 + 23630937-23631099,23631200-23631396,23631604-236317...    32   0.47 
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432...    31   0.82 
05_04_0158 + 18613265-18615304                                         30   1.9  
02_03_0357 + 18075171-18077240                                         29   3.3  
09_06_0200 + 21539963-21541271,21541912-21542013,21542095-215422...    28   7.6  

>03_06_0155 - 32031370-32031707,32033066-32033279
          Length = 183

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 18/64 (28%), Positives = 33/64 (51%)
 Frame = +2

Query: 440 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 619
           IEE +QR EEA + +Q     + +A K    +  +    + G+   +  R K+ E L E+
Sbjct: 98  IEELKQREEEATQAQQQADVKLLEAKKLASQYQKEADKCSSGMDTCEEAREKSSEALVEQ 157

Query: 620 KKIS 631
           +K++
Sbjct: 158 RKLT 161


>12_02_0847 +
           23630937-23631099,23631200-23631396,23631604-23631738,
           23631904-23632077,23632195-23632407,23632507-23632751,
           23632890-23632930,23633200-23633238,23633552-23633565
          Length = 406

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 18/62 (29%), Positives = 33/62 (53%)
 Frame = +2

Query: 437 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 616
           +I E+R+R +  ++   A+L+AMK+      N  ++   E     N +LE    K+QL+E
Sbjct: 41  EIAEERERFQLEQRGNDALLEAMKE-ELVAANNELEAAKEEISRKNNELE--SVKKQLQE 97

Query: 617 EK 622
            +
Sbjct: 98  SE 99


>02_05_0232 + 27041793-27042087,27042822-27042943,27043098-27043219,
            27043601-27043705,27043828-27044257,27044356-27044517,
            27044565-27045260,27045349-27046128,27046441-27046654,
            27047621-27047981,27047993-27048140,27048276-27048419,
            27048784-27048888,27049749-27049794,27050089-27050255,
            27050338-27050490,27050654-27050950,27051053-27051220,
            27051298-27051363,27051451-27051927,27052031-27052768,
            27052935-27053120
          Length = 1993

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 15/57 (26%), Positives = 30/57 (52%)
 Frame = +2

Query: 446  EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 616
            E+ ++ ++ +    AMLQ +KD      N  +Q+K     ++  ++E  +TK Q +E
Sbjct: 1431 EEAKKFQKIKMDLLAMLQRVKDVENLNRNEKMQRKDMEEKIARQRMEIEETKRQRDE 1487


>05_04_0158 + 18613265-18615304
          Length = 679

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
 Frame = +2

Query: 443 EEKRQRLEEAEKKRQAML-----QAMKDASKTGPNFTIQKK----SENFGLSNAQLERNK 595
           +EK ++ +E E K Q  L     +AMK   KTG N  I+KK    +E     +A++ ++K
Sbjct: 608 QEKVEKNQEKEMKIQEKLGEIFDKAMKSEEKTGQNPGIEKKIQDTAEKKQEHDARVVQDK 667

Query: 596 TKEQLEEEKKI 628
            ++  +E KKI
Sbjct: 668 VEKIQDEAKKI 678


>02_03_0357 + 18075171-18077240
          Length = 689

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
 Frame = +2

Query: 536 TIQKKSENFGLSNAQLERNKT-----KEQLEEEKKISLSIRIKP 652
           +I++K +NF L+  ++ RN+T       QL EE KIS+S  + P
Sbjct: 594 SIKEKFKNFNLAFEEIYRNQTTWKVPDPQLREELKISISENVIP 637


>09_06_0200 +
           21539963-21541271,21541912-21542013,21542095-21542291,
           21542396-21542603,21542685-21542922,21543010-21543160,
           21543538-21543849
          Length = 838

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -2

Query: 662 RWSAA*CGWTGRSSSPLPAAPWSCCAPAGHC 570
           RWS+    W      P    P+  C P G+C
Sbjct: 272 RWSSGSSAWVVLQEWPAGCDPYDFCGPNGYC 302


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,195,013
Number of Sequences: 37544
Number of extensions: 211702
Number of successful extensions: 824
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)