Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31333
         (591 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      35   6e-04
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      35   6e-04
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    28   0.068
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    24   1.1  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   1.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   1.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.6  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   2.6  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   3.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   4.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.9  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   5.9  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   5.9  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   7.8  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   7.8  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   7.8  
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    21   7.8  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   7.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   7.8  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 34.7 bits (76), Expect = 6e-04
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +3

Query: 354 VETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVMLSPL-PHQCLSRSLVLLPT 530
           + +P     L    SPG ++   PS S+ SP+ +  SP ++ SPL PH+      V LP 
Sbjct: 681 ISSPGALSGLSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQSPLTPHEAFD---VKLPP 737

Query: 531 SP 536
            P
Sbjct: 738 PP 739


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 34.7 bits (76), Expect = 6e-04
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +3

Query: 354 VETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVMLSPL-PHQCLSRSLVLLPT 530
           + +P     L    SPG ++   PS S+ SP+ +  SP ++ SPL PH+      V LP 
Sbjct: 573 ISSPGALSGLSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQSPLTPHEAFD---VKLPP 629

Query: 531 SP 536
            P
Sbjct: 630 PP 631


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 27.9 bits (59), Expect = 0.068
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +2

Query: 359  NPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPV 499
            +P A+    QGS S  S EGVP+    V   +G    G+    SPPV
Sbjct: 1086 DPVALKSAQQGSSS--SSEGVPLKGTAVPPPSGSSGPGSTGSKSPPV 1130


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 121 IPVQHIPAVRSRDHSYSVSAHPDLLYCPRQSSTQGI 228
           IPV HIP  +  DH      H    +  R++S++GI
Sbjct: 241 IPVGHIPIRQCDDHRDRPPRHFHEEHDTRRASSRGI 276


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 393 HSPGHLLKVFPSASITSPTRTDTSPLVMLSPLPHQ 497
           HSP   + V  S SIT PT+T       L+P P +
Sbjct: 24  HSPQQSIIV--SGSITQPTKTVIQSKRPLAPAPER 56


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
 Frame = -3

Query: 247 LSAVTLRYLGYYSD---GGNRGDRDGQKRSRSGHGNERPVCAVPVWVLLVEFIF 95
           +  V + +LG  +D   GG  G RDG +    G   +R    +P  V  VE +F
Sbjct: 76  IPGVAVDFLGENNDDSGGGRGGGRDGDRGDGGGEEKKREF-YIPPEVENVEDLF 128


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +2

Query: 446 DENGYQPTGNAIPTSPPVPEQIA-RALAYIAKKHSSQEVSDKSHR 577
           D+NG++   N   T P V  Q+A    A    K+S+  V++KS R
Sbjct: 78  DQNGFRNFTNLKKTHPKVKLQVAVGGWAEGGSKYSAM-VAEKSRR 121


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 590 NPKYVCEIYRLLLERNVSW 534
           NP  +CE    LL  NV W
Sbjct: 195 NPSAICESAAQLLFMNVQW 213


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 486 LPHQCLSRSLVLLPTSPRNI 545
           LPH   + S +L P  P N+
Sbjct: 119 LPHPAAAHSALLSPAMPHNL 138


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 590 NPKYVCEIYRLLLERNVSW 534
           NP  +CE    L+  NV W
Sbjct: 195 NPSAICESAAQLIFMNVQW 213


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 292 LLLRNQQRYRCPRTGSST*PWWKPPCCSRRC 384
           LL   +Q Y  PR   S  P W   C ++RC
Sbjct: 37  LLYTYRQPY--PRQKKSHPPQWTWQCINQRC 65


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 251 VKFGNEINPDGSYTYFY 301
           +KFG + +P+G Y   Y
Sbjct: 429 IKFGRKADPNGDYIRKY 445


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = -1

Query: 330 SWAAIPLLVS*K*V*EPSGLISFPNLTVSAP*PSDTLGTTLTGAIEEIGM 181
           +W  + LL +   +   + + SF  LT+     +DT+    T AI  +G+
Sbjct: 44  AWTYLILLTTWTVISASTRIKSFKFLTIGVGITTDTIDRVFTVAIPFVGI 93


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 422 EHLQEMSRRMSPVQRREQQGG 360
           +HLQE+  R+      EQ  G
Sbjct: 166 QHLQELGLRLEDANSDEQDDG 186


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 422 EHLQEMSRRMSPVQRREQQGG 360
           +HLQE+  R+      EQ  G
Sbjct: 166 QHLQELGLRLEDANSDEQDDG 186


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 246 SAP*PSDTLGTTLTGAI 196
           S+P PSD L T+ T ++
Sbjct: 48  SSPTPSDKLNTSTTSSV 64


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 234 PSDTLGTTLTGAIEEI 187
           P D LG  + GA+ EI
Sbjct: 44  PCDALGNQIKGALPEI 59


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 577 SVRFIAYFLRGMFLGDVGKSTSDLLRHWWGS 485
           S   +A FL   F G +  +T+D +  +WG+
Sbjct: 2   SKALVASFLLVYFSGALVSATTDKVVCYWGT 32


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 422 EHLQEMSRRMSPVQRREQQGG 360
           +HLQE+  R+      EQ  G
Sbjct: 166 QHLQELGLRLEDANSDEQDDG 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,078
Number of Sequences: 336
Number of extensions: 3402
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)